جست‌وجوی استاد و پژوهشگر

Joong Hyoun Chinمشاهده پروفایل

دانشیار

• Plant Breeding
• Genetics
• Genomics
• +۵ مورد دیگر

Joong Hyoun Chin is an Associate Professor at the Department of Integrative Biological Sciences and Industry , Sejong University. His career spans over a decade at the International Rice Research Institute (IRRI) as a Scientist and Postdoc Fellow, and he currently leads the Plant Traits Development Lab. He holds a Ph.D. and M.S. in Plant Breeding and Genetics from Seoul National University. Education Ph.D., Plant Breeding and Genetics (2005), Seoul National University M.S., Plant Breeding and Genetics (2000), Seoul National University B.S., Agronomy (1996), Seoul National University Research Interests : Dr. Chin focuses on rice and medicinal plant breeding for abiotic/biotic stress resistance, genomics-assisted breeding, and bio-industry system development. His work addresses climate change adaptation through traits like phosphorus-use efficiency, submergence tolerance, and high-temperature resilience. Article Trends : His recent publications emphasize rice genomics (e.g., phosphorus deficiency tolerance, hull-splitting genes), stress-resistant rice varieties (e.g., Sechanmi , Seso ), and medicinal plant research on milk thistle ( Silybum marianum ), including genome assembly, silymarin content analysis, and agricultural phenotyping. Scientific Awards : Research award, Society of Korean Breeding Science (2022) Best research award, Society of Korean Breeding Science (2018) Chungcheongnam-do Governor's Award (2019) RDA Honorary Overseas Scientist (2010) Editorial Roles : Dr. Chin serves on the editorial boards of Plant Breeding and Biotechnology , SABRAO Journal of Breeding and Genetics , and Scientific Data . His lab collaborates with institutions like the Rural Development Administration, CGIAR, and DNA Care Co., Ltd., aligning with UN SDGs for sustainable agriculture.

Don Gammonمشاهده پروفایل

استادیار

• Virology
• Immunology
• Molecular Biology
• +۳ مورد دیگر

Don Gammon is an Assistant Professor in the Department of Microbiology at the University of Texas Southwestern Medical Center. He earned his B.S. in Biological Sciences from the University of Windsor and Ph.D. in Virology from the University of Alberta, where his work identified key mechanisms of poxvirus drug resistance and host-virus enzyme interactions. After postdoctoral training with Nobel Laureate Craig Mello at the University of Massachusetts Medical School, where he developed RNA virus-lepidopteran host systems to study antiviral immunity, Gammon established his lab to investigate virus-host interplay using multidisciplinary approaches. His discoveries include the role of poxvirus A51R proteins in microtubule stabilization and the FEAR antiviral pathway. His research spans virology, immunology, and molecular biology, focusing on how viruses evade host defenses and manipulate cellular machinery. He has secured patents for oncolytic virotherapy applications. The Gammon Lab employs cell culture, virology, and biochemical techniques alongside Lepidopteran and Caenorhabditis elegans models to dissect conserved antiviral mechanisms and viral countermeasures. Scientific Awards: U.S. Patent for ribonucleotide reductase-deficient poxviruses in oncolytic virotherapy W.W. Caruth, Jr. Scholar in Biomedical Research

Anna Moszczynskaمشاهده پروفایل

دانشیار

• Addiction and Substance Abuse
• Neuropharmacology
• Neurodegenerative Diseases
• +۳ مورد دیگر

Dr. Anna Moszczynska is an Associate Professor in the Pharmaceutical Sciences Department at Wayne State University within the College of Pharmacy and Health Sciences . Her academic journey includes advanced degrees in Chemical Engineering (1988, Technical University of Lodz, Poland) Cell Biology (1995, University of Toronto, Canada) Neurochemistry (2002, University of Toronto, Canada) Postdoctoral training at Center for Addiction and Mental Health (2005), University of Guelph (2007), and Boston University (2008). Her research focuses on Addiction and Substance Abuse , Neuropharmacology , and Neurodegenerative Diseases , particularly investigating Parkin and Proteasome as molecular drug targets in Methamphetamine Use Disorder (MUD) Transposable Elements (rat LINE-1 and Identifier elements) in METH neurotoxicity using rat models and techniques like 2D gel electrophoresis , Co-immunoprecipitation , In Vivo Gene Transfer , and Proteomic Analysis . Recent publications highlight her work on parkin-deficient models (2021, 2025), epigenetic mechanisms (2023), and protein interaction networks (2024, 2025). Her studies explore METH-induced transcriptomic changes , VMAT2 interactions , and neurochemical biomarkers .

• Bioinformatics
• Computational Biology
• RNA Biology
• +۵ مورد دیگر

Chao Zeng is an Associate Professor at Waseda University’s Research Institute for Science and Engineering, affiliated with the School of Advanced Science and Engineering. He holds a PhD in Science from the University of Tokyo (2016) and a Master’s in Information Science from Kyoto University (2013). His research integrates computational biology and RNA genomics, focusing on non-coding RNAs, RNA localization mechanisms, and repetitive genetic elements. Dr. Zeng’s work spans bioinformatics algorithm development , RNA structure-function relationships , and transcriptomic regulation in disease . Key interests include lncRNA interactions with ribosomes, phase separation of RNA, and RNA-binding protein networks. His lab employs high-throughput sequencing, machine learning, and comparative genomics to decode RNA regulatory systems across species. His publications emphasize RNA biology in cancer and fibrosis , with recent work exploring mitotic RNA editing, inflammatory recovery pathways, and RNA quality control. Article analyses reveal consistent themes: lncRNA mechanisms (35%), RNA-protein interactions (25%), computational methods (20%), splicing/localization (15%), and translational applications (5%). Awards & Grants: Waseda University Teaching Award (2022) JSPS Grants: PI for ‘Repetitive Elements in Genome Regulation’ (2022-2025) and ‘lncRNAs in Genetic Compensation’ (2020-2022) Co-investigator for Phase Separation Research (2023-2026) and Cancer RNA Mechanisms (2021-2023) He leads the RNA Bioinformatics group at Waseda, collaborating with the Hamada Lab and international teams. Future work targets RNA-based therapeutics and multi-omics integration for disease modeling.

• RNA therapeutics
• Artificial Intelligence
• probabilistic model
• +۱۰ مورد دیگر

Michiaki Hamada is a Professor at Waseda University's Faculty of Science and Engineering, School of Advanced Science and Engineering. He also serves as President of the Japanese Society for Bioinformatics (since April 2024) and holds visiting positions at the National Institute of Advanced Industrial Science and Technology and Nippon Medical School's Graduate School of Medicine. His research laboratory focuses on bioinformatics with particular emphasis on functional RNA, epigenetics, and RNA drug discovery. Ph.D. in Science from Tokyo Institute of Technology (2009) Master's in Mathematics from Tohoku University (2002) Bachelor's in Mathematics from Tohoku University (2000) Professor Hamada's research spans multiple areas of bioinformatics, with particular focus on RNA biology, machine learning applications in sequence analysis, and computational approaches to drug discovery. His work bridges computational methodologies with biological applications, developing tools for RNA structure prediction, aptamer design, and genome analysis. His laboratory has made significant contributions to understanding RNA-protein interactions, transposable element biology, and the application of deep learning to RNA engineering problems. His recent publications demonstrate a strong focus on applying machine learning and deep learning techniques to RNA-related problems, including RNA aptamer generation, RNA structure prediction, and RNA therapeutic development. His research group has developed several computational tools like RaptGen for aptamer design, DeepRaccess for RNA accessibility prediction, and REPrise for repeat detection. His work shows a consistent pattern of developing computational methods with direct biological applications, particularly in the areas of RNA therapeutics and genome analysis. Okuma Memorial Academic Award (Encouragement Award) 2024.11 Waseda University Teaching Award 2023.07 Waseda University Next Generation Core Researchers 2022 Waseda University Research Award for International Research Dissemination 2021.12 MEXT Young Scientists' Award 2017.04 National Institute of Advanced Industrial Science and Technology President's Award (Research) 2016.04 As Principal Investigator, Professor Hamada has led numerous competitive research projects including multiple KAKENHI grants (Young Researcher, Challenging Exploratory Research, New Academic Fields), CREST programs, and industry collaborations. He actively contributes to the bioinformatics community through leadership roles, including serving as President of the Japanese Society for Bioinformatics and organizing joint symposia between Waseda University and Nippon Medical School. His laboratory maintains strong collaborations with both computational and experimental groups, facilitating the translation of computational methods into biological applications. Professor Hamada leads the Hamada Laboratory (hamadalab.com), which focuses on developing computational tools for RNA analysis and design. His group maintains active collaborations with researchers at Nippon Medical School, AIST, and other institutions, creating a strong interdisciplinary research environment. The laboratory has developed several widely-used bioinformatics tools and maintains an active publication record in high-impact journals across computational biology, genomics, and RNA research fields.

Joan Barauمشاهده پروفایل

پژوهشگر

• Transposable Elements Biology
• Epigenetics
• Genome Instability
• +۵ مورد دیگر

Dr. Joan Barau serves as Group Leader at the Institute of Molecular Biology (IMB) in Mainz since 2019, affiliated with Johannes Gutenberg University. His research focuses on transposable elements and their impact on mammalian genome regulation during development and evolution. His laboratory investigates how transposon biology influences genome stability through epigenetic mechanisms, particularly DNA methylation in germ cells and pluripotent stem cells. Key research areas include: piRNA-guided DNA methylation pathways involving DNMT3C Evolutionary arms races between transposons and host defense mechanisms Intergenerational transmission of epigenetic information Transposon-driven phenotypic variation (e.g., Agouti epiallele) Recent publications reveal a strong emphasis on epigenetic control of transposons in germline development, with significant contributions to understanding DNMT3 enzymes and their role in genomic stability. His work bridges molecular genetics, evolutionary biology, and epigenetics using mouse models and advanced genomic techniques. Dr. Barau mentors a multicultural research team with emphasis on scientific passion and career development, actively seeking motivated researchers for projects in transposon biology and epigenetic inheritance.

René Kettingمشاهده پروفایل

استاد

• RNA Biology
• Epigenetics
• Developmental Biology
• +۴ مورد دیگر

René Ketting is a Professor at the Faculty of Biology, Johannes Gutenberg University Mainz (JGU), and Scientific Director at the Institute of Molecular Biology (IMB), Mainz. His research focuses on small RNA-driven gene regulatory mechanisms in the germline, particularly piRNAs and their role in controlling transposable elements and epigenetic inheritance.

Jan Padekenمشاهده پروفایل

پژوهشگر

• Epigenetics
• Chromatin Biology
• Genome Stability
• +۶ مورد دیگر

Jan Padeken is a Group Leader at the Institute of Molecular Biology (IMB) in Mainz since 2022. His research focuses on epigenetic regulation through histone H3 lysine 9 methylation (H3K9me), exploring its roles in heterochromatin establishment, genome stability, and tissue integrity. Education: PhD in Cell Biology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg (2013) Diploma in Biology, Albert-Ludwigs University, Freiburg (2009) Vordiploma in Biology, RWTH Aachen University (2006) His work investigates how persistent genotoxic stress alters heterochromatin dynamics in C. elegans , linking these changes to cancer, ageing, and Cockayne syndrome. He employs genetic tools, sequencing, and quantitative microscopy to analyze acute and long-term epigenetic responses. Recent research trends highlight his focus on: Pathways controlling H3K9 methylation Transposable element silencing Epigenetic stress adaptation Heterochromatin propagation

Terrence Fureyمشاهده پروفایل

استاد

• Epigenetics
• Gene Regulation
• Inflammatory Bowel Diseases (IBD)
• +۴ مورد دیگر

Dr. Terrence (Terry) Furey is a Professor in the Department of Genetics and Biology at the UNC School of Medicine. His research focuses on gene regulatory processes, particularly epigenetically controlled mechanisms, and their role in complex diseases like inflammatory bowel diseases (IBD). The Furey Lab specializes in computational analysis of genome-wide open chromatin, histone modifications, miRNA, and gene transcription data from high-throughput sequencing experiments. Key research areas: Epigenetics, Chromatin Biology, IBD Pathogenesis, Computational Genomics, Microbiome Interactions Specialized methodologies: Development of statistical and computational tools for genomic data analysis Research highlights include investigating genetic and epigenetic contributors to IBD through collaborations with Dr. Shehzad Sheikh, particularly analyzing chromatin reprogramming, miRNA expression, and microbial composition in both IL-10 knockout models and human intestinal tissues. The lab has identified distinct molecular signatures of Crohn's disease associated with clinical phenotypes. Article trends demonstrate expertise spanning Chromatin accessibility analysis in disease states MicroRNA biomarker discovery in IBD Computational tool development (ROCCO, DeFCoM, GSAASeqSP) Multi-omics integration in complex phenotypes Environmental-genetic interaction studies Translational IBD research Dr. Furey actively collaborates with researchers across the Center for Gastrointestinal Biology and Disease (CGIBD), including Drs. Sartor, Sheikh, and Rusyn. His work bridges clinical/translational research with microbiome studies , focusing on how epigenetic landscape alterations contribute to disease progression.

Özgen Denizمشاهده پروفایل

مدرس ارشد

• Transposable Elements
• Epigenetics
• Cancer Biology
• +۷ مورد دیگر

Dr Özgen Deniz is a Senior Lecturer and Group Leader at the Queen Mary University of London , Centre for Epigenetics. Her research focuses on the epigenetic regulation of transposable elements (TEs) and their role in blood cancers, particularly acute myeloid leukaemia (AML). She combines functional and computational genomics to investigate how TEs contribute to oncogenesis and cancer treatment efficacy. Core member of QMUL Epigenetics Hub Member of LMS Imperial TE Hub Member of European Haematology Association Theme Lead in Mobile DNA Editorial Board Her lab has uncovered TEs as novel oncogenic regulators in AML, demonstrating their ability to dysregulate gene expression and trigger anti-tumour immunity. Current projects include functional interrogation of TEs in adult and paediatric AML, supported by major grants such as the ERC Starting Grant (2024-2029) and Cancer Research UK Career Development Fellowship (2022-2028). Scientific Awards: Cancer Research UK Career Development Fellowship The Deniz Lab actively recruits researchers interested in transposon biology and cancer epigenetics, with collaborations across epigenetics and haematology networks. Their work bridges genomic instability, chromatin dynamics, and therapeutic resistance in leukaemia.

• Chromatin Organization
• Epigenetics
• Plant Reproduction
• +۴ مورد دیگر

Dr. Célia Baroux is a Professor and Group Leader in the Department of Plant Developmental Genetics at the Institute of Plant Biology, University of Zurich. Her research program investigates the functional dynamics of chromatin organization in plant reproductive development, with significant contributions to understanding nuclear architecture and epigenetic regulation. Her primary research interests focus on: 3D genome organization in epigenetic regulation Chromatin dynamics during cell fate specification Nuclear envelope interactions in plant cells Reproductive development in Arabidopsis Evolutionary aspects of epigenetic mechanisms Analysis of her recent publications (2020-2022) reveals a consistent focus on chromatin architecture, with particular emphasis on histone modifications, nuclear positioning, and transposable element regulation. Her work bridges molecular genetics, epigenomics, and developmental biology, often employing innovative technical approaches like inducible gene systems in ovules. Dr. Baroux actively contributes to the scientific community through editorial roles at Frontiers in Plant Science and co-founding the INDEPTH Academy, which serves as a collaborative platform for researchers studying nuclear domains in plants. Her extensive publication record demonstrates consistent productivity in high-impact plant science journals. Her laboratory maintains an active research program with international collaborations, as evidenced by multi-institutional publications spanning Switzerland, France, the UK, and beyond. The lab's work combines molecular genetics, advanced imaging, and computational approaches to unravel fundamental mechanisms of plant reproduction.

Jeremy Lubanمشاهده پروفایل

استاد

• Virology
• Molecular Biology
• Infectious Diseases
• +۴ مورد دیگر

Jeremy Luban is the David J. Freelander Chair in AIDS Research at the University of Massachusetts Medical School, with joint appointments at the Broad Institute of MIT and Harvard, Ragon Institute of MGH, MIT and Harvard, and Massachusetts Consortium on Pathogen Readiness. He holds an M.D. from Columbia University College of Physicians and Surgeons and a B.A. in Biology and Music from SUNY Purchase. His research focuses on virology, molecular mechanisms of infectious diseases (particularly HIV/AIDS and emerging viruses), host-pathogen interactions, and genomic approaches to disease mechanisms. Work spans viral pathogenesis, retrovirology, and host defense systems, with emphasis on structural biology of viral components and therapeutic interventions. Recent publications demonstrate extensive work in viral evolution, host immune responses to pathogens like HIV, Ebola, and SARS-CoV-2, and innovative gene-editing technologies. Research consistently integrates molecular virology with computational and structural approaches to address fundamental questions in infectious disease biology. Awards/Honors: David J. Freelander Chair in AIDS Research

Oleg Simakovمشاهده پروفایل

دانشیار

• Evolutionary Genomics
• Comparative Animal Genomics
• Developmental Biology
• +۴ مورد دیگر

Oleg Simakov is an Associate Professor and Head of the Department of Neuroscience and Developmental Biology at the University of Vienna. His research focuses on metazoan genome architecture, evolutionary transitions, and cephalopod-specific genomic innovations through comparative and computational approaches. BS in Biology, University of Karlsruhe MS in Biology, University of Heidelberg PhD in Biology, EMBL/University of Konstanz Key research areas include: Evolutionary genomics of metazoans Syntenic gene cluster analysis 3D chromatin modeling Cephalopod molecular evolution His publications reveal trends in chromosomal evolution , gene linkage dynamics , and repetitive element expansion across diverse taxa including octopuses, hydra, and lungfish. Current work involves genomic investigations of Euprymna scolopes and Hydra magnipapillata to elucidate evolutionary novelties. Current research team includes: PhD students: Koto Kon, Lisa Rouressol Master's students: Georgios Efthymiadis, Gözde Yalcin Postdocs: Darrin Schultz, Thea Rogers Technicians: Fatih Sarigöl, Nina Znidaric

Emile Gluck-Thalerمشاهده پروفایل

استادیار

• Fungal Pathology
• Plant Pathology
• Horizontal Gene Transfer
• +۴ مورد دیگر

Emile Gluck-Thaler is an Assistant Professor in the Department of Plant Pathology at the University of Wisconsin-Madison, affiliated with the College of Agricultural and Life Sciences. His research focuses on fungal genetics, horizontal gene transfer, and genome evolution, particularly in plant pathogens. Education: PhD in Plant Pathology, The Ohio State University BS in Life Sciences with Microbiology Specialization, McGill University, Canada Research Interests span fungal genomics, transposable elements, and mechanisms of pathogen adaptation. He investigates how mobile genetic elements drive diversity and resistance in plant pathogens like Macrophomina phaseolina and Pyricularia species. Notable Trends in Research include the role of giant transposons in horizontal gene transfer, geostatistical modeling for pathogen distribution, and the evolutionary implications of metabolic gene clusters in fungi. Labs & Collaborations: He works in the Discovery Building at UW-Madison, contributing to interdisciplinary research on fungal biology and plant-microbe interactions.

Biswajyoti Sahuمشاهده پروفایل

پژوهشگر ارشد

• Biomedical Sciences
• Cancer Biology
• Transcriptional Regulation
• +۳ مورد دیگر

Biswajyoti Sahu is an Academy Research Fellow and Docent at the University of Helsinki, affiliated with the Doctoral Programme in Integrative Life Science and the Applied Tumor Genomics (ATG) group at Medicum. He previously served as a Visiting Scientist at the University of Cambridge (2018–2019) and the Whitehead Institute for Biomedical Research (2015). Biomedical Sciences Cancer Biology Transcriptional Regulation Epigenetics His research focuses on oncogenes, transcription factor dynamics, and epigenetic mechanisms in cancer and development. Key themes include chromatin modifier enzymes, transposable elements, and cellular reprogramming. Recent publications highlight his work on oncogene convergence pathways (2025), transposable element derepression (2025), and single-cell multiome protocols (2024). Awards include the Finnish Cultural Foundation’s Grant (2011), Endocrine Trainee Day Fellowship (2009), and multiple presentation awards.