جست‌وجوی استاد و پژوهشگر

Jessica Kissingerمشاهده پروفایل

استاد پژوهشی

• Parasite Genomics
• Bioinformatics
• Evolutionary Genetics
• +۳ مورد دیگر

Jessica Kissinger is a Distinguished Research Professor in the Department of Genetics at the University of Georgia's Franklin College of Arts and Sciences. Her research focuses on parasite genomics, bioinformatics, and host-pathogen interactions, with emphasis on apicomplexan pathogens including Toxoplasma , Cryptosporidium , and malaria-causing Plasmodium species. Education: • A.B. cum laude, University of Chicago (1989) • Ph.D. in Molecular, Cellular & Developmental Biology, Indiana University (1995) • Postdoctoral training at NIH/NIAID, FIOCRUZ Brazil, and University of Pennsylvania Research Focus: Dr. Kissinger leads projects in comparative genomics, data integration, and systems biology of eukaryotic pathogens. Her lab develops computational tools for analyzing parasite genome evolution and host-pathogen dynamics, supported by NIH funding including the VEuPathDB resource center. Awards and Honors: University Professor, UGA (2025) Lamar Dodd Creative Research Award (2024) Fellow, AAAS (2021) Fulbright Scholar (2022) Distinguished Research Professor (2017) Current Projects: Her group combines wet-lab and computational approaches to study organellar genome evolution, gene regulation in Cryptosporidium , and multi-omics analysis of host-parasite systems through active NIH grants (R21AI180871, R01AI148667). She advises graduate students and collaborates internationally on parasitic disease research.

Cresten Mansfeldtمشاهده پروفایل

استادیار

• Environmental Engineering
• Environmental Microbiology
• Bioinformatics
• +۷ مورد دیگر

Cresten Mansfeldt is an Assistant Professor in Environmental Engineering at the University of Colorado Boulder, affiliated with the Civil, Environmental, and Architectural Engineering Department. He holds a B.C.E. from the University of Minnesota (2007) and a Ph.D. from Cornell University (2013). Previously, he worked as a Research Scientist at Eawag (Swiss Federal Institute of Aquatic Science and Technology). His research focuses on microbial processes interacting with human-engineered systems, including wastewater treatment, riverine ecosystems, and bioremediation. Key interests include microbial community dynamics, contaminant biotransformation, and reactor design for resource recovery. Mansfeldt’s lab actively recruits students at all levels, emphasizing interdisciplinary approaches combining computational modeling, molecular microbiology, and environmental analytics. Research highlights include developing frameworks for wastewater-based public health surveillance, analyzing wildfire impacts on water quality, and modeling microbial community responses to environmental perturbations. Awards include the 2025 '40 Under 40' recognition from the American Academy of Environmental Engineers and Scientists, and a 2008 NSF Graduate Research Fellowship. Recent work addresses ethical considerations in wastewater sampling and integrates ecological risk assessment with synthetic biology. His publications span topics like microbial enzyme biomarkers, micropollutant fate in activated sludge systems, and lipid-accumulating algae for biofuel production. Current projects aim to optimize wastewater treatment for trace organic contaminant removal while enhancing microbial community resilience.

• Neuroscience
• Developmental Biology
• Molecular Biology
• +۴ مورد دیگر

Summer Thyme is an Assistant Professor at UMass Chan Medical School, primarily affiliated with the T.H. Chan School of Medicine's Department of Biochemistry and Molecular Biotechnology. She also holds roles in multiple departments including Neurobiology, NeuroNexus Institute, and the Morningside Graduate School of Biomedical Sciences. Her research focuses on neurodevelopmental disorders using zebrafish models, CRISPR genome engineering, and schizophrenia-associated genes. She holds a BA in Biology/Chemistry from Scripps College and a PhD in Biochemistry from the University of Washington. Her research interests span neurodevelopmental mechanisms, genetic mutations affecting brain structure, and translational applications of CRISPR technology. Key areas include studying autism-risk mutations, mitochondrial regulation in neural stem cells, and cerebellar development. She has contributed to platforms like ZebraShare for data dissemination and developed low-cost behavioral phenotyping systems for zebrafish. Recent publications highlight studies on diencephalon development, sensory system impairments in zebrafish mutants, and CRISPR-based genome editing tools. Collaborations involve interdisciplinary teams addressing neurodevelopmental and genetic questions. Her work has implications for understanding psychiatric and neurological disorders through model organism research.

Yawei Liمشاهده پروفایل

مدرس

• Artificial Intelligence
• Computer Vision
• Deep Learning
• +۶ مورد دیگر

Yawei Li is a Lecturer at ETH Zürich, affiliated with the Integrated Systems Institute. His research focuses on efficient deep learning and AI systems for vision, language, and biosignals. Collaborating with Professors Luca Benini and Luc Van Gool, he explores topics like foundation models for biosignals, efficient neural network design, and deployment on RISC-V cores. He has organized workshops such as the NTIRE Challenge on Efficient Super-Resolution and served as a Senior Program Committee member for AAAI and IJCAI. He has supervised numerous PhD and Master students, with open positions available in foundational model development and bio-signal analysis. Key achievements include the Best Poster Presentation at ICVSS 2019 and contributions to projects like TinyYOLO for smart glasses. His work emphasizes practical applications of AI on embedded systems and low-power devices. Teaching includes courses like 'Deep Learning for Image Manipulation' and involvement in Computer Vision Lab initiatives. His research spans image restoration, neural network compression, and cross-modal analysis, with publications in top venues like CVPR, NeurIPS, and ECCV.

Martin Anderssonمشاهده پروفایل

استاد

• Solid Oxide Fuel Cells
• Polymer Electrolyte Membrane Fuel Cells
• Heat and Mass Transfer
• +۴ مورد دیگر

Martin Andersson is a Professor at Lund University's Department of Energy Sciences, affiliated with the LTH Profile Area: The Energy Transition and AdTherM: Advanced Computing for Sustainable Thermal Management in Industry. His research focuses on heat and mass transfer in fuel cells, including solid oxide (SOFCs) and polymer electrolyte membrane (PEMFCs) systems. He leads initiatives such as the Energy@LTH project and contributes to international collaborations like the IEA Advanced Fuel Cell Annexes. Andersson holds the titles of Director of First and Second Cycle Studies and Assistant Director, emphasizing educational leadership alongside research. His work aligns with UN Sustainable Development Goals, particularly energy systems and environmental sustainability. He has received awards including the Marie Curie Fellowship and VINNMER fellowship, and actively organizes seminars and conferences on energy transition topics. Research interests include modeling of transport phenomena in fuel cell components, nano/micro-structured materials' effects on energy efficiency, and sustainable thermal management strategies. His projects span numerical methods development, catalyst optimization for hydrogen production, and interdisciplinary approaches to electrochemical systems. Andersson has supervised seven research works and collaborates globally on topics like hydrogen business models and solar energy applications. Scientific contributions include over 150 peer-reviewed publications, with recent highlights on multiphysics modeling of porous media, hydrogen catalysts, and solar dryer systems. His work bridges computational analysis and experimental validation, addressing both fundamental and applied challenges in energy engineering.

• Bioinformatics
• Machine Learning
• Genomics
• +۳ مورد دیگر

Dr. Alfredo Iacoangeli is a Reader in Bioinformatics at King’s College London, leading a joint research programme between the Department of Basic & Clinical Neuroscience and the Department of Biostatistics & Health Informatics at the Institute of Psychiatry, Psychology & Neuroscience. His work focuses on computational approaches for neurodegenerative diseases, particularly amyotrophic lateral sclerosis (ALS) and Alzheimer’s disease. He earned his PhD in Life Sciences from Sapienza University of Rome in 2016, specializing in structural bioinformatics. Key roles: Deputy Lead of the Motor Neuron Disease research theme at the NIHR Maudsley Biomedical Research Centre. Expertise: Bioinformatics, machine learning, genomics, and translational research. His research interests include developing computational tools for genomic analysis (e.g., RetroSnake, GEOexplorer), identifying genetic subtypes of ALS, and advancing precision medicine strategies. He has received awards such as the 2024 Paolo Gontijo Award and the 2022 Genes Young Investigator Award. Notable grants include £983k from the Medical Research Council for studying ancient viral DNA in ALS. He collaborates internationally, contributing to initiatives like Project MinE and the ALS Sequencing Consortium. His work bridges computational biology and clinical neurology, emphasizing multi-omics data integration for disease stratification and drug discovery.

• Transcriptional Genomics
• Genomic Technologies
• Chromatin Regulation
• +۴ مورد دیگر

Peggy Farnham, PhD, is the William M. Keck Professor of Biochemistry and Professor of Cancer Biology at the Keck School of Medicine of the University of Southern California (USC). She previously held roles at the University of Wisconsin-Madison and UC Davis. Her research focuses on chromatin regulation, transcription factor binding, and genomic technologies, with leadership in the ENCODE and PsychENCODE consortia. Dr. Farnham’s work has advanced understanding of epigenetic mechanisms in cancer and neurodevelopmental disorders. Education: Bachelor’s degree from Rice University, PhD from Yale University, postdoctoral training at Stanford University. Research Interests: Transcriptional genomics, genomic technologies, chromatin regulation, and their roles in cancer and disease. Key projects include ENCODE (encyclopedia of DNA elements) and NIH Roadmap Reference Epigenome Mapping Center initiatives. Publications: Over 300 peer-reviewed articles, including seminal work on ZFX transcription factors, epigenetic engineering, and cancer genomics. Recent studies explore mechanisms of chemoresistance, cisplatin resistance in bladder cancer, and 3D epigenomic mapping in prostate cancer. Awards: AAAS Fellow (2010), ASBMB Herbert A. Sober Award (2012). Labs/Teams: Director of the Farnham Lab, collaborating on projects in the ENCODE consortium and PsychENCODE. Active in training the next generation of genomic researchers.

Floris Barthelمشاهده پروفایل

استادیار

• Cancer Genomics
• Molecular Biology
• Brain Neurobiology
• +۳ مورد دیگر

Floris Barthel is an Assistant Professor in the Neuroscience (PhD) program at Arizona State University (ASU), leading the Barthel Lab at the Translational Genomics Research Institute (TGen) in Phoenix. His research focuses on cancer genomics, particularly glioma evolution, utilizing cutting-edge technologies like long-read sequencing (PacBio Revio, Oxford Nanopore Promethion) and spatial transcriptomics (10X Xenium, Vizgen MERSCOPE). The lab investigates telomere dysfunction, genome instability, and tumor microenvironment interactions to understand glioma development and therapy resistance. Key areas: glioma evolution, telomere biology, structural variation analysis, spatial transcriptomics. Technologies employed: long-read sequencing, spatial genomics, computational genomics. Research projects include mapping telomere dysfunction impacts on glioma genomes, reconstructing evolutionary trajectories, and developing assays like Telomere-C to study chromatin interactions. The lab actively recruits students and postdocs for projects in computational biology and experimental genomics. Notable collaborations include work with Cold Spring Harbor Laboratory and institutions globally. The lab’s future directions aim to identify therapeutic vulnerabilities and improve patient outcomes through precision medicine approaches.

Douglas Shepherdمشاهده پروفایل

دانشیار

• Bioimaging
• Gene Regulation
• Biophysics
• +۳ مورد دیگر

Douglas Shepherd is an Associate Professor of Physics at Arizona State University (ASU), affiliated with the School of Life Sciences and the Center for Biological Physics. He leads the Quantitative Imaging and Inference (QI2) Lab, which focuses on developing high-throughput fluorescence imaging methods and statistical tools to study cellular organization in tissues and organs. His research contributes to the Chan Zuckerberg Initiative's Human Cell Atlas, particularly in mapping gene expression in the human lung. Education: Ph.D. in Physics, Colorado State University (2011) B.S. in Physics, University of California Santa Barbara (2003) Research interests span bioimaging, gene regulation in pathogenic bacteria, optical device development, and the physics of biological systems. The QI2 Lab emphasizes open science, sharing software and datasets for microscopy control and analysis via platforms like GitHub. Recruitment is ongoing for postdocs and students in theoretical/experimental roles. The lab’s work integrates advanced microscopy with computational modeling to address questions in tissue development and cellular decision-making. Recent technical innovations include structured illumination modules and light-sheet microscopy platforms for high-resolution imaging.

Ying Geمشاهده پروفایل

استاد

• Cardiovascular Diseases
• Mass Spectrometry-based Proteomics
• Metabolomics
• +۷ مورد دیگر

Professor Ying Ge is a faculty member at the University of Wisconsin-Madison, with appointments in the Department of Cell and Regenerative Biology and the Department of Chemistry , both under the School of Medicine and Public Health . She serves as the Director of the Human Proteomics Program and is a faculty trainer in multiple graduate programs, including Translational Cardiovascular Science and Chemistry-Biology Interface Training. Her research focuses on cardiovascular diseases using top-down mass spectrometry , native proteomics , and metabolomics to study proteoform heterogeneity, post-translational modifications, and metabolic signatures in cardiac and lung tissues. Recent scientific awards highlight her lab's excellence, including her recognition as a 2024 Analytical Scientist Power List Human Health Hero . Her students have received NSF GRFP awards , ASMS Graduate Student Awards , and travel grants . The Ge Research Group has published extensively on proteomics and metabolomics in journals like Nature , PNAS , and Anal. Chem. Their work emphasizes technical innovation (e.g., photocleavable surfactants, MASH Native) and clinical applications in heart failure, lung cancer, and diabetes. 2025 : Structural Heterogeneity of AMPK Proteoforms 2025 : Native Top-Down Proteomics of Protein Complexes 2025 : Metabolomic Signatures in Lung Cancer Metastasis 2025 : Rational Design of Protein Complexes via Native MS 2025 : Troponin I Isoform Switch in Cardiac Regeneration

• DNA Repair Mechanisms
• Genome Stability
• Oxidative Stress
• +۴ مورد دیگر

Magnar Bjørås is a Professor at the Norwegian University of Science and Technology (NTNU), affiliated with the Department of Clinical and Molecular Medicine under the Faculty of Medicine and Health Sciences. His research focuses on genome dynamics, oxidative stress, DNA repair mechanisms, and epigenetic stability. He leads projects on DNA repair in cancer, oxidative DNA modifications, bacterial toxin-antitoxin systems, and nanoparticle technology for genomics. His research group investigates the role of DNA repair in neurodegeneration, cognition, and diseases like infections, heart failure, and cancer. Key projects include collaborations with clinicians to study disease impacts of DNA repair deficits and developing nanoparticle-based tools for genomic analysis. Notable contributions include characterizing DNA repair enzymes, solving protein-DNA complex structures, and identifying novel functions of repair mechanisms beyond canonical DNA maintenance. Recent work explores synergistic antiviral drug combinations, NEIL3's role in neurogenesis and behavior, and the interplay between oxidative damage and gene regulation. His group also develops low-cost nucleic acid extraction methods using magnetic nanoparticles, with applications in microbial profiling and viral research. Collaborations extend to Oslo University Hospital and the University of Oslo, emphasizing translational research in clinical contexts. Projects on lysosomal storage disorders and rare neurodegenerative diseases highlight his interdisciplinary approach to bridging basic science and clinical challenges.

• Artificial Intelligence
• Medical Informatics
• Environmental Science
• +۵ مورد دیگر

Prof. Kun Zhang is a Professor in the Department of Computer Science at Xavier University of Louisiana. His interdisciplinary research spans artificial intelligence, medical informatics, environmental science, and biomedical engineering. He focuses on applying machine learning to solve complex problems in healthcare, climate policy, and genomics. Recent work includes AI-driven carbon emission analysis, robotic surgical navigation systems, and genomic studies on prostate cancer disparities. His research integrates computational methods with real-world applications, such as developing algorithms for error localization in programming assignments and watermarking AI-generated text. He has published extensively in top-tier journals, with a strong emphasis on clinical outcomes in orthopedic trauma and thrombosis prevention. Notable contributions include studies on perioperative ultrasound screening for pulmonary embolism prevention and the biomechanical evaluation of fracture fixation devices. His environmental policy work explores green energy transitions and carbon responsibility allocation in Chinese cities. Prof. Zhang collaborates across disciplines to bridge computational innovation with societal impact.

• Genetics
• Aquaculture
• Quantitative Trait Loci (QTL)
• +۳ مورد دیگر

Herman W. Raadsma is a researcher at James Cook University's School of Marine and Tropical Biology. His work spans genetics, aquaculture, and genomics, focusing on shrimp breeding (Penaeus monodon, Litopenaeus vannamei) and bovine genetics. He collaborates extensively on studies involving quantitative trait loci (QTL), linkage disequilibrium, and genomic selection. His publications highlight advancements in Shrimp disease resistance (Gill-associated virus) Genomic tools for aquaculture breeding programs Conservation genetics in koalas and African wild dogs High-density SNP mapping and haplotype blocks Raadsma contributes to both experimental and computational approaches in genetics, including RAD-Seq assays, genome-wide selection models, and network visualization tools for population structure analysis. He has no listed scientific awards in this dataset.

• Genomics
• Bioinformatics
• Immunology
• +۴ مورد دیگر

Matthew A. Field is a researcher affiliated with James Cook University (JCU), specializing in genomics, bioinformatics, and immunology. His work bridges basic research with applied solutions in tropical health, conservation biology, and infectious disease. Research Interests: Dr. Field's primary focus includes genomic analysis of wildlife (e.g., corals, koalas, dingoes), parasitology (hookworms, schistosomes), and immunological mechanisms in autoimmune disorders. He also explores precision medicine approaches for cancer and diabetes, leveraging computational tools to interpret genetic variation. Recent Articles: His 2024 publications highlight coral genomics and One Health strategies, while 2023 work includes dingo genome analysis and anti-inflammatory mechanisms of helminths. Key themes involve genomic applications to conservation, tropical disease mitigation, and immune dysfunction studies. Grants & Advising: Collaborates extensively with institutions like JCU, the University of Sydney, and international consortia (e.g., PCAWG). Advises on genomic methodologies and bioinformatic pipelines for clinical and ecological research. Labs/Teams: Active in JCU's Tropical Health and Genomics research groups, contributing to projects on coral resilience, parasitic infections, and genetic diversity conservation.

• 3D Genomics
• Spatial Transcriptomics
• Nanoscopy Imaging
• +۳ مورد دیگر

Miao Liu is a Researcher in the Department of Biomedical Engineering at Yale University, affiliated with the Yale School of Medicine. Their work focuses on advancing imaging and genomic technologies to study complex biological systems at unprecedented resolution. Research interests include 3D genomics, spatial transcriptomics, and high-throughput nanoscopy platforms for studying chromatin organization and cellular dynamics. Liu has contributed to the development of tools like PYME and ProbeDealer, which enable multiplexed imaging and probe design for fluorescence in situ hybridization (FISH). Their studies explore chromatin architecture in cancer cells, hematopoietic stem cell niches, and the impact of epigenetic perturbations on genome organization. This work bridges computational methods, molecular biology, and engineering to address fundamental questions in cell biology and oncology. No formal advisees or grants are explicitly listed in the provided materials. Current research emphasizes scalable imaging solutions for genomic analysis and functional studies of 3D genome structures in health and disease.