Genomics in Pathogen Control Professors and Supervisors | ApplySharif

جست‌وجوی استاد و پژوهشگر

استاد راهنما، استاد دانشگاه یا پژوهشگر مناسب برای مسیر پژوهشی‌تان را پیدا کنید و با او ارتباط بگیرید.

نمایش ۷۰۶-۷۲۰ از ۳٬۷۱۸ استاد راهنما

اطلاعات این پروفایل‌ها از صفحات عمومی دانشگاه‌ها جمع‌آوری شده و ممکن است به‌روز نباشد.

Melodie Wellerمشاهده پروفایل

استادیار مدعو

University of UtahUnited States

Melodie Weller, Ph.D., is an Adjunct Assistant Professor of Microbiology and Immunology and Associate Professor of Dentistry at the University of Utah. She leads the Weller Lab, which investigates how viral infections impact oral health and chronic disease development. Education: Ph.D. – University of Montana Research Interests: Dr. Weller’s research centers on the intersection of virology, autoimmunity, and oral health. Her lab focuses on: Hepatitis Delta Virus (HDV): Investigating its role in Sjögren’s syndrome and its ability to trigger complete disease phenotypes in vivo. Post-COVID-19 Oral Disease: Exploring how SARS-CoV-2 infection impacts oral health and contributes to chronic conditions. Non-Hodgkin Lymphoma: Studying viral profiles associated with lymphoma development. Viral-Mediated Autoimmunity: Understanding how chronic viral infections disrupt immune regulation and contribute to autoimmune diseases. Research Trends: Her recent publications demonstrate a strong focus on HDV epidemiology, diagnostic strategies, and its clinical implications in autoimmune diseases. She has also contributed to understanding the neurological impacts of astrovirus infections and the implementation of COVID-19 surveillance in dental settings. Scientific Contributions: Identified HDV in salivary glands of Sjögren’s syndrome patients. Developed optimized sequencing strategies for HDV genome analysis. Contributed to global epidemiological tracking of HDV. Explored viral triggers of autoimmune diseases and lymphoma. Contact & Resources: Email: melodie.weller@hsc.utah.edu Faculty Page: Available on the University of Utah website. PubMed: Literature search available for full publication list.

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Michael Kanostمشاهده پروفایل

استاد

Kansas State UniversityUnited States

Michael Kanost serves as University Distinguished Professor in the Department of Biochemistry & Molecular Biophysics at Kansas State University's College of Arts and Sciences. His laboratory investigates insect biochemistry with emphasis on immunity, cuticle formation, and iron homeostasis using Manduca sexta as primary model organism. His research spans three interconnected domains: Insect immunity focusing on protease cascades, melanization pathways, and antimicrobial responses Cuticle biochemistry examining sclerotization processes and exoskeleton mechanical properties Iron homeostasis mechanisms including transferrin function and metal transport Current work integrates genomic approaches with biochemical characterization to understand immune recognition systems. Publications since 2015 demonstrate consistent contributions to insect immunology, with recent emphasis on protease network dynamics (2022-2025), iron metabolism (2022-2024), and translational applications in antimicrobial development (2023). Key trends include expanding from Manduca sexta to Anopheles and Tribolium models while maintaining focus on conserved immune mechanisms. Award highlights include: Commerce Bank & W.T. Kemper Foundation Distinguished Graduate Faculty Award (2020) University Distinguished Professor title recognizing exceptional scholarship Kanost actively mentors graduate students through thesis supervision and undergraduate researchers through programs like Developing Scholars and GROW workshops. His lab coordinates the Manduca sexta genome annotation project and maintains extensive insect colonies for immunological studies. Current research directions explore connections between redox regulation and immune activation, with potential applications in biomaterials design and vector control strategies.

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Roman M. Pogranichniyمشاهده پروفایل

استاد

Kansas State UniversityUnited States

Roman M. Pogranichniy is a Professor of Virology in the Department of Diagnostic Medicine/Pathobiology at Kansas State University's College of Veterinary Medicine. He also holds a diagnostic appointment at the Kansas State Veterinary Diagnostic Laboratory (KSVDL), where he serves as Section Head of Diagnostic Virology and Serology. His work bridges academic research, diagnostic services, and teaching within the veterinary medical field. Education: DVM (1993), Ukrainian State Agricultural University, Kiev, Ukraine MS (2000), Iowa State University PhD (2005), Iowa State University Roman M. Pogranichniy is a veterinarian with advanced training in veterinary microbiology and virology, focusing on viral infectious diseases, their pathogenesis, and the development of new diagnostic and preventive methods. His research spans multiple areas including coronavirus studies across species (including SARS-CoV-2 in animals), African Swine Fever, porcine reproductive and respiratory syndrome virus (PRRSV), and canine respiratory pathogens. His work demonstrates a strong emphasis on developing diagnostic tools such as PCR panels and ELISA assays for veterinary applications. He actively collaborates with scientists, field veterinarians, producers, and researchers to understand disease pathogenesis and develop innovative diagnostic tools and vaccines. His recent publications (2021-2024) demonstrate a strong focus on emerging viral threats, with particular attention to cross-species transmission of coronaviruses, swine viral diseases, and diagnostic method development. His work spans both fundamental virology and applied diagnostic development, with publications appearing in journals covering veterinary diagnostics, virology, and infectious diseases. Professional Service: Section Head of Diagnostic Virology and Serology at KSVDL Active collaborations with international researchers on viral disease projects Dr. Pogranichniy integrates his diagnostic, research, and teaching responsibilities, providing classroom instruction for veterinary and graduate students, conducting workshops and seminars with field veterinarians and producers, and presenting at scientific meetings. His work directly impacts veterinary diagnostic capabilities and animal health through the development of new testing methodologies and understanding of viral pathogenesis.

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Kristin Michelمشاهده پروفایل

استاد

Kansas State UniversityUnited States

Kristin Michel is a Professor in the Division of Biology at Kansas State University , where she has been on faculty since 2007. Her research focuses on mosquito immunology, host-pathogen interactions, and vector biology, aiming to understand how mosquito immune systems influence malaria transmission and fungal biocontrol strategies. Education: Ph.D., Entomology, University of California-Riverside (2002) Diplom (M.Sc. equiv.), Biology, Christian-Albrechts-University in Kiel, Germany Research Interests: Immune regulation via protease networks in mosquitoes Role of serpins in malaria parasite transmission Mosquito-fungus interactions and bioinsecticide development Vector control strategies and disease prevention Epithelial immunity in mosquito midgut and salivary glands Publications: Recent work explores gene coexpression in protease networks, mosquito humoral immunity, and fungal biocontrol agents. Her articles span interdisciplinary approaches integrating biochemistry, genetics, and ecology. Lab Members: Graduate Students: Bianca Morejon Viteri (Microbiology Ph.D.), Ashmita Pandey (Biology Ph.D.), David Hayes (Microbiology Ph.D.), Amare Sumpter (Biomedical Science M.S.)

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Nuria Morfinمشاهده پروفایل

استادیار

University of ManitobaCanada

Honey Bee Health
Entomology
Apiculture
+۵ مورد دیگر

Nuria Morfin is an Assistant Professor in the Department of Entomology at the University of Manitoba's Faculty of Agricultural and Food Sciences. She also holds an Adjunct Professor position at the Department of Biochemistry and Molecular Biology, University of British Columbia. Education : PhD in Environmental Sciences (University of Guelph), MSc in Animal Health & Production Sciences (UNAM), Veterinary Medicine (UNAM). Research Interests focus on honey bee (Apis mellifera) health, including: Impact of stressors (pesticides, pathogens) on bee behavior and physiology Immune responses and disease resistance mechanisms Host-pathogen interactions with Varroa destructor and Nosema ceranae Behavioral immunity and grooming behaviors Recent Publications highlight her work on: Varroa destructor control strategies and pesticide interactions Geospatial and seasonal patterns of bee viral infections Metagenomic analysis of gut microbiomes in agricultural environments Standardized methods for colony health assessment She actively contributes to technology transfer through roles such as Chair of the BC Technology Transfer Program and Secretary of the Canadian Association of Professional Apiculturists, bridging academic research with practical beekeeping applications.

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Martin Chilversمشاهده پروفایل

استاد

Michigan State UniversityUnited States

Martin Chilvers is a Professor in the Cell & Molecular Biology Program and an Associate Professor at the BioMolecular Science Gateway at Michigan State University. He is affiliated with the Molecular Plant Sciences Program and the Genetics & Genome Sciences Program, focusing on fungal and oomycete diseases of field crops. Research Interests: His work centers on plant diseases caused by fungi and oomycetes, with an emphasis on epidemiology, genetics of host-pathogen interactions, and management strategies for field crops. Key areas include corn and soybean pathology, molecular diagnostics, and climate adaptation in disease control. Notable Trends: Recent publications highlight predictive disease modeling, IoT-based monitoring systems, fungicide sensitivity analysis, and genetic mapping of resistance traits. His research spans temperate and tropical crops, integrating molecular tools with field-scale agronomy. Technical Affiliations: Chilvers collaborates with multidisciplinary teams at Michigan State University, including programs in plant sciences, genetics, and bioMolecular research. His lab develops advanced diagnostic assays and explores pathogen biology through genomics and transcriptomics.

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Christopher M Watersمشاهده پروفایل

استاد

Michigan State UniversityUnited States

Christopher M Waters is a Professor in the Department of Microbiology, Genetics, & Immunology at Michigan State University's College of Natural Science. He holds faculty appointments in the Genetics & Genome Sciences Program and Cell & Molecular Biology Program. His research focuses on bacterial chemical signaling mechanisms in pathogens, particularly Vibrio cholerae, investigating how these systems regulate virulence and biofilm formation. Education: B.S., 1997, University of Kansas Ph.D., 2002, University of Minnesota Post-doctoral studies, 2003-2008, Princeton University Research Focus: Dr. Waters' laboratory studies cyclic di-GMP signaling and quorum sensing in bacterial pathogens. His work reveals how these chemical communication systems control critical processes like biofilm formation and virulence factor expression. The lab employs molecular genetics, biochemistry, and microscopy to dissect signaling pathways in Vibrio cholerae, with emphasis on identifying environmental cues that modulate cyclic di-GMP levels and developing anti-infective strategies targeting bacterial communication. Publication Trends: Recent publications demonstrate Waters' leadership in cyclic dinucleotide signaling, with significant contributions to understanding c-di-GMP/phosphodiesterase regulation, biofilm heterogeneity, phage-bacteria interactions, and cross-talk between signaling systems. His work spans fundamental mechanisms in Vibrio cholerae while extending to Pseudomonas aeruginosa, Agrobacterium tumefaciens, and plant pathogens, revealing conserved principles in bacterial signal transduction. Teaching & Mentoring: Dr. Waters teaches Microbial Genetics (MGI 431), Undergraduate Research (MGI 499), and Topics in Microbiology (MGI 991). His laboratory provides training in advanced microbiological techniques while investigating bacterial pathogenesis mechanisms. He maintains an active research program supported by competitive grants focused on bacterial signaling and antimicrobial development. Research Facility: The Waters Lab (https://mmg.natsci.msu.edu/waters-lab/) operates within MSU's state-of-the-art Biomedical and Physical Sciences facility, utilizing specialized equipment for molecular microbiology, live-cell imaging, and biochemical analysis of bacterial signaling pathways.

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Ananda Tiwariمشاهده پروفایل

پژوهشگر

University of HelsinkiFinland

Ananda Tiwari is a Postdoctoral Researcher at the University of Helsinki , affiliated with the Faculty of Veterinary Medicine and Department of Food Hygiene and Environmental Health . He contributes to the Helsinki One Health research group and maintains an ORCID iD (0000-0001-8026-6885). Research Focus : Environmental microbiology, antimicrobial resistance surveillance, wastewater-based epidemiology, zoonotic diseases, and one health approaches Projects : EplorAMREnv/211280 (NordForsk 2024-2026), Watershed Safety Plan (EU 2024-2027), MMM Lammaslaidun (Ministry 2022-2025) Publications (57 total) emphasize wastewater surveillance of pathogens and antibiotic resistance genes across Finland, Nepal, and India. His work appears in Antimicrobial Resistance and Infection Control , Scientific Reports , and Frontiers in Veterinary Science . Technical Expertise : Application of RT-qPCR standards, skimmed-milk flocculation methods, and genomic epidemiology for pathogen detection in complex environments.

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Julie Segreمشاهده پروفایل

استاد

National Institutes of HealthUnited States

Dr. Julie Segre is an NIH Distinguished Investigator and Chief of the Translational and Functional Genomics Branch at the National Human Genome Research Institute (NHGRI), part of the National Institutes of Health (NIH) in Bethesda, Maryland. She leads the Microbial Genomics Section, focusing on the genetic diversity of human-associated microbiota and their role in health and disease. Dr. Segre received her B.A. summa cum laude in mathematics from Amherst College, where she now serves on the board of trustees. She earned her Ph.D. in 1996 from the Massachusetts Institute of Technology in the laboratory of Eric Lander at the newly formed genome center. Following this, she completed postdoctoral training with Elaine Fuchs, an expert in skin biology, at the University of Chicago. Dr. Segre joined the National Human Genome Research Institute in 2000 and was promoted to senior investigator with tenure in 2007. Her research spans two major areas: foundational studies of the human skin microbiome and tracking hospital-associated bacterial pathogens. She pioneered the first topographical maps of human skin bacterial and fungal diversity, demonstrating that humans function as ecosystems with niche-dependent microbial populations. Her work extends to patient populations with atopic dermatitis and rare primary immune deficiencies, where longitudinal studies revealed drops in skin microbial diversity and increases in Staphylococcus aureus during disease flares. Analysis of her recent publications reveals a consistent focus on skin microbiome dynamics, particularly the relationship between Staphylococcus species and atopic dermatitis, as well as advanced genomic approaches to track hospital-acquired infections. Her work bridges basic microbiology with clinical applications, developing genomic tools that have transformed outbreak investigation and infection control practices. Her scientific achievements have been recognized with prestigious awards including: 2013 Service to America Medal (shared with Tara Palmore) Dr. Segre's research is built on extensive collaborations with the NIH Intramural Sequencing Center and clinical departments of Infection Control, Microbiology, and Dermatology. She is a leader in the NIH Roadmap Human Microbiome Project, effectively communicating complex genomic concepts to both scientific and public audiences. Her laboratory functions as an interdisciplinary team advancing our understanding of microbial genomics and its critical applications in human health.

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Markus Kaiserمشاهده پروفایل

استاد

University of Duisburg-EssenGermany

Prof. Dr. Markus Kaiser is a Professor of Chemical Biology at the University of Duisburg-Essen since 2010. He leads the Chemical Biology group at the Center of Medical Biotechnology (ZMB) , focusing on regulated proteolysis and bioactive small molecule mechanisms. University of Duisburg-Essen Center of Medical Biotechnology (ZMB) Faculty of Biology His research integrates chemical biology approaches with drug discovery , targeting proteases like HTRA1 and DPP8/9 for therapeutic applications in diabetes , cancer , and infectious diseases . Recent work explores chaperone complexes, plant-pathogen interactions, and tuberculosis treatments. The 2024-2025 publications highlight expertise in enzyme inhibition , targeted protein degradation , and pathogen manipulation across human and plant systems. These studies span journals like Nature Structural & Molecular Biology , Nature Communications , and Cell . Scientific Awards include: ERC Starting Grant (2011) Forschungspreis der Engelhornstiftung (2011) Marie Curie Postdoctoral Stipendium (2004-2005) Friedrich Weygand Prize (2003) He collaborates with national and international teams on projects like the EFRE/JTF ClearView project for AMD treatment strategies and participates in the DFG CRC 1430 on cell state transitions. His lab includes scientific coworkers (e.g., Dr. Farnusch Kaschani) and technical assistants (e.g., Leonard Sewald).

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Chakradhar Mattupalliمشاهده پروفایل

استادیار

Washington State UniversityUnited States

Dr. Chakradhar Mattupalli is an Assistant Professor in the Department of Plant Pathology at Washington State University (WSU), affiliated with the College of Agricultural, Human, and Natural Resource Sciences (CAHNRS). He leads the Berry and Potato Pathology (BPP) program at WSU Mount Vernon Research and Extension Center, focusing on disease biology and management in highbush blueberry and potato crops. His research integrates field studies, molecular techniques, and agricultural technologies to address crop health challenges. Education: PhD in Plant Pathology (University of Wisconsin-Madison), MS in Horticulture (Dr. Panjabrao Deshmukh Krishi Vidyapeeth), and BS in Agriculture (Acharya N. G. Ranga Agricultural University). Research Interests: Sustainable disease management, fungal pathogen resistance, crop-microbiome interactions, and agricultural innovation. Dr. Mattupalli’s work emphasizes practical solutions for growers, such as decision support systems for mummy berry disease and biodegradable mulch applications to reduce pathogen spread. His research spans from molecular diagnostics (e.g., FTA card-based virus detection) to large-scale agricultural practices, ensuring science translates into actionable strategies. Publications highlight contributions to understanding pathogen dispersal mechanisms (e.g., Botrytis cinerea splash dispersal), genetic diversity of soilborne pathogens, and crop improvement through breeding and grafting. He has received over 15 awards and fellowships, including recognition from the American Phytopathological Society and international scholarships. His lab collaborates on interdisciplinary projects, leveraging geospatial tools and robotics for disease monitoring. Dr. Mattupalli’s outreach includes extension activities to educate growers on integrated pest management and sustainable practices.

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Maria Maمشاهده پروفایل

استاد

Oklahoma State UniversityUnited States

Dr. Maria Ma is a Professor in the Department of Entomology and Plant Pathology at Oklahoma State University (OSU), affiliated with the Institute of Biosecurity & Microbial Forensics. She holds an 80% research and 20% teaching appointment. Dr. Ma specializes in microbial food safety and biosecurity, focusing on foodborne pathogen detection, contamination route analysis, and decontamination technologies. Educated at Purdue University (Ph.D. in Food Microbiology) and Dalian Polytechnic University (B.S. in Fermentation Engineering), she has over 15 years of academic experience, including postdoctoral research at the University of Georgia and guest work at the CDC. Her research spans novel detection methods (e.g., LAMP assays, PCR), cold plasma decontamination systems, and biosecurity strategies. She teaches advanced courses like Microbial Forensics and Career Skills for Scientists. Dr. Ma has secured funding from agencies like USDA NIFA for projects addressing pecan orchard food safety, pathogen controls, and biosecurity training. Her lab mentors Ph.D. and M.S. students in applied microbiology and food safety innovation.

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Poonam Sharmaمشاهده پروفایل

عضو هیئت علمی

Oklahoma State UniversityUnited States

Poonam Sharma is a Research Assistant Professor and Assistant Director of the Diagnostic Assay Validation Network (DAVN) at Oklahoma State University's Institute for Biosecurity and Microbial Forensics (IBMF). She holds a PhD in Human Pathology from Aix Marseille University, France, and completed a USDA-ARS postdoc at the National Poultry Research Center. Her work focuses on diagnostic assay development, specifically Next-Gen sequencing for poultry viruses and antimicrobial resistance in foodborne pathogens. She leads the National Diagnostic Assay Laboratory Network (DALN), coordinating plant disease diagnostic standards and assay validation protocols. Education : PhD in Human Pathology (Infectious Disease), Aix Marseille University, France Postdoc, USDA-ARS National Poultry Research Center, GA Research Interests : Diagnostic assay validation frameworks for plant pathogens Next-Gen sequencing applications in microbial forensics Antimicrobial resistance in foodborne pathogens Plant disease diagnostic network coordination Grant Funding : USDA-NIFA grant ($1M) for DAVN (2022-2026) Labs/Teams : Leads IBMF's efforts in the DALN and collaborates with USDA-ARS units on poultry virology and bacterial epidemiology. Active in developing standardized protocols for diagnostic assays in agriculture and food safety.

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Lise Pingaultمشاهده پروفایل

عضو هیئت علمی

University of Nebraska-LincolnUnited States

Dr. Lise Pingault is a Research Assistant Professor in the Department of Entomology at the University of Nebraska-Lincoln. Her research focuses on the molecular mechanisms of arthropod vectors and the development of innovative pest management strategies. PhD, Physiology and Molecular Genetics, University Blaise Pascal, France (2014) M.S., Molecular and Cellular Biology, University Pierre & Marie Curie Paris 6 (2010) B.S., Biology, University Francois Rabelais (2008) Dr. Pingault’s work integrates Arthropod Genomics , Plant-Insect Interactions , and Bioinformatics to study pathogen transmission dynamics and vector adaptation. She employs multi-omics and computational biology to develop novel pest control solutions. Her recent publications highlight trends in plant defense transcriptomics , molecular interactions between vectors and hosts, and bioinformatic tools for analyzing large datasets. Notable studies include aphid resistance in sorghum and viral tolerance in wheat. Dr. Pingault teaches graduate-level courses in sequencing data analysis and is an active member of the Entomological Society of America and American Society of Plant Biologists .

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Eunsook Parkمشاهده پروفایل

استادیار

University of WyomingUnited States

Dr. Eunsook Park is an Assistant Professor in the Department of Molecular Biology at the University of Wyoming, affiliated with the College of Agriculture, Life Sciences and Natural Resources. Her research focuses on understanding organelle dynamics and their roles in plant immunity, particularly chloroplast-nucleus communication during stress responses and autophagy modulation in fungal pathogens. She investigates how pathogens disrupt host organelle function and employs high-throughput screening to develop novel antifungal agents. Her research interests are divided into two main areas: 1) Exploring chloroplast-nucleus communication mechanisms during plant immune responses to microbial infections, and 2) Developing autophagy-modulating compounds to combat fungal diseases. Recent work includes studies on RXLR effector proteins disrupting vesicle trafficking and BRET-based screens for antifungal lead compounds. Key achievements include establishing a non-integrative viral delivery system for CRISPR-Cas9 genome editing in plants and characterizing the role of NLR immune receptors in programmed cell death. Her work is supported by grants such as an international NIH-funded project in Korea. While no formal advisees are listed, her lab focuses on plant-microbe interactions, organelle biology, and translational research for agricultural applications. No scientific awards are explicitly mentioned in the provided texts.

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