جست‌وجوی استاد و پژوهشگر

Babak Hassibiمشاهده پروفایل

استاد

• Communications Theory
• Information Theory
• Adaptive and Statistical Signal Processing
• +۱۱ مورد دیگر

Babak Hassibi is a Professor of Electrical Engineering and Computing and Mathematical Sciences at the California Institute of Technology (Caltech). He obtained his B.S. from the University of Tehran (1989), M.S. and Ph.D. from Stanford University (1993, 1996), and has held positions at Caltech since 2001, including roles as Assistant Professor, Associate Professor, Professor, and Executive Officer. Education : University of Tehran, B.S. (1989) Stanford University, M.S. and Ph.D. (1993, 1996) Academic Roles : Assistant Professor, Caltech (2001–03) Associate Professor (2003–08) Professor (2008–13) Binder/Amgen Professor (2013–16) Bohn Professor (2016–) Executive Officer for Electrical Engineering (2008–15) Associate Director for Information Science and Technology (2010–12) Research Interests : Babak Hassibi’s work spans Communications , Signal Processing , Control Theory , and Machine Learning . He has contributed to wireless networks, genomic signal processing, multi-antenna systems, robust control, and high-dimensional statistics. His mathematical interests include Random Matrices and Group Representation Theory . Recent Publications highlight his focus on Adaptive Control , Stochastic Optimization , and Quantum Detection . Notable trends include Regret-Optimal Control , Stochastic Mirror Descent , and DNA Microarray Applications . Scientific Awards : Highly Cited Researcher Advising and Grants : He has advised numerous graduate students and postdocs, many of whom now hold prominent positions at institutions like MIT, USC, and Stanford. His research includes collaborations on patents and projects related to Wireless Communications and Genomic Technologies . Labs and Teams : Leads the Hassibi Group at Caltech, which explores nonlinear photonic systems, ultrafast optics, and quantum information processing.

Max Alekseyevمشاهده پروفایل

دانشیار

• Computational Graph Theory
• Enumerative Combinatorics
• Computational/Algorithmic Biology
• +۱ مورد دیگر

Max Alekseyev is an Associate Professor in the Mathematics Department and Computational Biology Institute. His research spans computational graph theory, enumerative combinatorics, computational/algorithmic biology, and comparative genomics. He focuses on interdisciplinary problems, blending mathematics with biological applications, particularly in genome assembly and analysis. His work includes advancements in genome scaffolding algorithms, combinatorial sequence analysis, and mathematical biology. Notable contributions involve genome assembly tools like CAMSA and studies on ancestral genome reconstruction. He also explores theoretical topics such as Bernoulli series generalizations and modular data classification. His research trends highlight a blend of pure mathematics (e.g., number theory, graph theory) and applied computational methods, addressing challenges in genomics and evolutionary biology. He secured an NSF Student Travel Grant in 2018 for computational molecular biology.

• Bioinformatics
• Genomics
• Cancer Genomics
• +۷ مورد دیگر

Dr. Andre Kahles is a Lecturer in the Department of Computer Science at ETH Zürich, specializing in biomedical informatics. His research focuses on computational methods for analyzing large-scale genomic and transcriptomic data, with applications in cancer genomics, metagenomics, and precision medicine. He has contributed to the development of tools such as SplAdder for alternative splicing analysis, MetaGraph for petascale genomic data exploration, and SECEDO for subclone detection in cancer genomes. His work bridges algorithmic innovation with biological insights, addressing challenges in single-cell analysis, genome graph alignment, and multi-omics integration. Key research themes include: Developing scalable algorithms for processing nanopore sequencing and metagenomic data Characterizing somatic mutations and non-coding drivers in cancer genomes Advancing genome graph-based alignment and annotation methods Integrating multi-omics data for clinical decision-making and tumor profiling His publications span topics like RNA-seq analysis, chromothripsis in cancers, and global urban microbiome tracking through the MetaSUB consortium. Kahles has collaborated on landmark projects including the Pan-Cancer Analysis of Whole Genomes (PCAWG) and the Tumor Profiler Study.

Igor Jurisicaمشاهده پروفایل

استاد

• Data Science and Computational Biology
• Machine Learning
• Artificial Intelligence
• +۶ مورد دیگر

Igor Jurisica is a Professor at the University of Toronto and a Senior Scientist at the Krembil Research Institute’s Data Science Discovery Centre for Chronic Diseases. He also serves as Visiting Scientist at IBM CAS, Scientific Director of the World Community Grid, and Chief Scientist at the Creative Destruction Lab (Rotman School of Management). His research focuses on integrative computational biology, data mining, and AI-driven models for cancer mechanisms, drug discovery, and chronic disease management. Key affiliations include the Osteoarthritis Research Program, Schroeder Arthritis Institute, and leadership roles in open science initiatives like the World Community Grid, a global distributed computing platform with 810,000+ volunteers. Jurisica’s work bridges computational tools (e.g., NAViGaTOR visualization platform, MirDIP databases) and clinical applications, emphasizing explainable AI in healthcare. Research interests span proteomics, microRNA regulation, systems vaccinology, and multi-omics integration for disease stratification. Notable contributions include identifying prognostic signatures in cancer and osteoarthritis, machine learning models for drug repurposing, and sportomics analyses of athletic biomarkers. He has been recognized as a Thomson Reuters Highly Cited Researcher (2014-2016) and ranked among the Top 100 AI Leaders in Oncology (2023). His labs develop open-access tools like PathDIP, OsteoDIP, and miRAnno to advance translational research.

Gabriela V. Cohen Freueمشاهده پروفایل

دانشیار

• Statistical Methodology
• High-Dimensional Data Analysis
• Robust Statistics
• +۶ مورد دیگر

Gabriela V. Cohen Freue is an Associate Professor in the Department of Statistics at the University of British Columbia (UBC), Vancouver Campus, and holds a Canada Research Chair (CRC Tier 2). She leads an interdisciplinary research program focusing on developing robust statistical methodologies for analyzing high-dimensional data in genomics and proteomics, with applications in medical sciences. Her work addresses challenges such as outliers, collinearity, and measurement errors, with applications in biomarker discovery for diseases like multiple sclerosis, cardiovascular disorders, and asthma. Her academic journey includes collaborations across disciplines, including with the BC Cancer Agency, PROOF Centre of Excellence, and iCAPTURE. She has pioneered methods like the Penalized Elastic Net S-Estimator (PENSE) and contributed to proteomic data analysis tools such as the Protein Group Code Algorithm (PGCA). She also co-developed the MDQC quality control method for microarrays. Research interests include robust regression, biomarker development, and statistical methods for big data. Her team includes postdocs, PhD, and MSc students, with a focus on training in both statistical rigor and interdisciplinary collaboration. Notable grants include a CANSSI Collaborative Research Team Project (CRT) award for robust causal inference and prediction modeling. Teaching responsibilities span statistical consulting, high-dimensional biological data analysis, and generalized linear models. She emphasizes active learning and real-world problem-solving in her courses. Her lab’s work is supported by grants from the Data Science Institute (DSI) and collaborations with institutions like the PROOF Centre. Alumni of her group hold positions in academia (e.g., George Mason University) and industry (e.g., Merck, BC Cancer Research Centre).

David Blaauwمشاهده پروفایل

استاد

• Ultra-Low Power Circuits
• IoT and Sensor Networks
• RF Communication
• +۷ مورد دیگر

David Blaauw is the Kensall D. Wise Collegiate Professor of Electrical Engineering and Computer Science (EECS) at the University of Michigan. His research focuses on ultra-low-power analog/mixed-signal circuits, mm-scale sensors, neural networks, and biomedical applications. He leads the Blaauw Lab, which has pioneered innovations like the Michigan Micro Mote (M^3) and neural recording probes. His work emphasizes real-world deployability, with applications in environmental monitoring (e.g., monarch butterflies), medical devices, and robotics. Education: B.S. in Physics and Computer Science, Duke University (1986) Ph.D. in Computer Science, University of Illinois Urbana-Champaign (1991) Research Interests: Blaauw’s lab explores ultra-low-power computing, mm-scale systems, RF communication, in-memory computing, and genomics acceleration. Key projects include: Millimeter-scale computers (e.g., 0.04mm³ temperature sensors) Wireless neural interfaces for brain-machine communication Energy-efficient accelerators for edge AI and genomics Micro-robotics with sensing/actuation/computation Awards: IEEE Fellow 2016 SIA-SRC Faculty Award Motorola Innovation Award Best Paper Awards at ISSCC, ISCA, and RFIC Advising & Impact: Over 600 publications, 65 patents, and 4 startup companies spun from his lab. Current research includes genome sequencing accelerators (GenAx) and neural recording dust for brain mapping. He directs the Michigan Integrated Circuits Lab and chairs major conferences like ISSCC and DAC. Labs/Teams: Blaauw Lab (University of Michigan) Michigan Integrated Circuits Lab (MICAL)

Ross Thyerمشاهده پروفایل

استادیار

• Synthetic Biology
• Protein Engineering
• Genetic Code Expansion
• +۶ مورد دیگر

Ross Thyer is an Assistant Professor in the Department of Chemical and Biomolecular Engineering at Rice University. He holds a BSc (Hons) from the University of Western Australia and a PhD from the Harry Perkins Institute of Medical Research under Drs. Rackham and Filipovska. His postdoctoral training at the University of Texas at Austin with Prof. Andrew Ellington focused on engineered biosynthesis pathways and non-canonical amino acids. He co-founded GRO Biosciences, a Boston-based biotech startup, and leads the Thyer Lab at Rice. His research bridges synthetic biology, protein engineering, and molecular programming to address global challenges. Key areas include expanding genetic codes for therapeutics, engineering biosynthetic pathways via genetic circuitry, and developing microbial systems for environmental bioremediation. Core technologies include deep learning for protein design, modular DNA assembly, and high-throughput selections. The lab also develops tools like MutCompute for enzyme engineering and domesticates non-model bacteria for bioproduction. His work emphasizes technology innovation, with recent advances in selenocysteine incorporation, L-DOPA sensing systems, and actinobacteria toolkits. The Thyer Lab actively collaborates on biocatalyst development and translational applications in healthcare and industry.

Kunihiko Kanekoمشاهده پروفایل

استاد

• Theoretical Biophysics
• Complex Systems
• Chaos
• +۶ مورد دیگر

Kunihiko Kaneko is a Professor at the Niels Bohr Institute, University of Copenhagen, with a distinguished career in theoretical biophysics and complex systems. He received his PhD and MSc in Physics from the University of Tokyo, and has held leadership roles at the Universal Biology Institute and Center for Complex Systems Biology. PhD Physics, 1984 - University of Tokyo MSc Physics, 1981 - University of Tokyo His research spans five primary areas: Universal Biology, Evolutionary Constraints, Ecosystem Dynamics, Neural Cognition, and Universal Anthropology. He has published extensively on multi-level consistency principles, dimensional reduction in biological systems, and reciprocity between robustness and plasticity across scales. Recent publications show strong focus on microbial ecosystems (2025), evolutionary game theory (2025), neural modular architectures (2024), and dimensional reduction in cellular systems (2024). His work bridges physics and biology through dynamical systems theory applied to diverse phenomena from protocells to human societies.

Salim El Rouayhebمشاهده پروفایل

دانشیار

• Information Theory
• Coding Theory
• Information-Theoretic Security
• +۴ مورد دیگر

Salim El Rouayheb is an Associate Professor in the Department of Electrical and Computer Engineering at Rutgers University. He leads the Coding and Securing Information (CSI) Lab, which focuses on information-theoretic security and privacy in distributed systems. His research spans multiple areas including secure machine learning, private information retrieval, and data synchronization. Dr. El Rouayheb received his Ph.D. in Electrical Engineering from Texas A&M University in 2009. Prior to joining Rutgers, he was an Assistant Professor at the Illinois Institute of Technology (2013-2017), a Research Scholar at Princeton University (2012-2013), and a Postdoctoral Researcher at UC Berkeley (2010-2011). His research interests focus on information-theoretic security in distributed systems, private information retrieval and search, secure machine learning algorithms, and data synchronization in distributed systems. He has made significant contributions to developing frameworks that provide information-theoretic privacy guarantees in various contexts including federated learning, genomic data analysis, and decentralized networks. His work often bridges theoretical foundations with practical applications, particularly in the areas of secure distributed computing and privacy-preserving algorithms. His recent publications demonstrate a strong trend toward applying information-theoretic principles to address privacy and security challenges in machine learning systems, particularly in federated and decentralized settings. Many of his papers explore random walk approaches for decentralized learning, secure matrix multiplication techniques, and privacy mechanisms that can be toggled "on and off" based on correlation patterns in data. His work spans both theoretical contributions in information theory and practical implementations for real-world systems. Dr. El Rouayheb has received several prestigious awards including the NSF CAREER Award (2016), Google Faculty Research Award (2018), and the Rutgers University Walter Tyson Junior Faculty Chair (2019). He has successfully secured multiple research grants including NSF SaTC, NSF CAREER, Google Faculty Research Awards, and Army Research Lab funding. His lab, the Coding and Securing Information (CSI) Lab, currently includes postdoc Xingran Chen, PhD student Zonghong Liu, and undergraduate researchers. The CSI Lab maintains an active research agenda with regular publications in top-tier venues and hosts the Shannon Channel, a series of online talks related to information theory. Dr. El Rouayheb is also involved in organizing workshops on coding theory and information security.

Soeren Lienkampمشاهده پروفایل

استادیار

• Molecular Biology
• Genetics
• Developmental Biology
• +۵ مورد دیگر

Prof. Dr. Soeren Lienkamp is an Assistant Professor at the Institute of Anatomy , Faculty of Medicine , University of Zurich . His work bridges digital education and genetic research , focusing on enhancing medical teaching through innovative formats. Research Interests : Genetics, developmental biology, kidney disease modeling, CRISPR applications, digital medical education, and advanced microscopy. Methodologies : Combines Xenopus tropicalis models, deep learning , and bioengineering to study genetic kidney disorders and improve diagnostic tools. Publication Trends : His recent articles highlight predictable genome editing , 3D imaging technologies , and mechanistic insights into kidney and eye development. Earlier works focus on ciliary function , Wnt signaling , and metabolic stress in renal cells.

Brent Fogelمشاهده پروفایل

استاد

• Neurogenetics
• Hereditary Ataxia
• Spinocerebellar Ataxia
• +۷ مورد دیگر

Dr. Brent Fogel is a Professor in the Departments of Neurology and Human Genetics at the David Geffen School of Medicine, UCLA. He directs the Neurogenetics Clinic and the UCLA Clinical Neurogenomics Research Center , focusing on diagnosing and managing genetic neurological disorders such as cerebellar ataxia , ataxia with oculomotor apraxia , spastic paraplegia , and leukodystrophies . His research integrates genomics , bioinformatics , and neuroimaging to improve precision medicine in prenatal counseling and rare disease diagnosis. Education: MD, PhD from Medical College of Wisconsin (2003) PhD in Genetics (2001) Internship in Internal Medicine (Northwestern University, 2004) Residency in Neurology (UCLA, 2007) Fellowship in Neurogenetics (UCLA, 2009) Board Certified in Neurology (2009) Research Focus: Dr. Fogel’s work spans neurogenetics , spinocerebellar ataxia , leukodystrophy , and genomic technologies . He has pioneered gene discovery in hereditary ataxias, developed transcriptional biomarkers , and contributed to diagnostic guidelines for rare disorders. His studies on lysosomal genes in Parkinson’s disease and exome sequencing disparities address critical gaps in neurogenetic research. Key Collaborations: He leads multicenter studies with the Ataxia Global Initiative , Undiagnosed Diseases Network , and Genomics England Research Consortium . His lab ( FogelLab ) develops tools like multiWGCNA for gene network analysis.

Franz Lennard Ricklefsمشاهده پروفایل

استاد

• Neurosurgery
• Neuro-oncology
• Molecular Neurobiology
• +۵ مورد دیگر

Prof. Dr. med. Franz Lennard Ricklefs is a Senior Physician and Head of the Working Group at the Department of Neurosurgery, University of Hamburg Faculty of Medicine. He is a Medical Specialist in Neurosurgery with cross-disciplinary expertise in neuro-oncology, molecular pathology, and extracellular vesicle research. Affiliations: University Medical Center Hamburg-Eppendorf (UKE), European Liquid Biopsy Society (ELBS), International Consortium on Meningiomas (ICOM) Research Interests: His work focuses on neurosurgical oncology, particularly glioblastoma and meningioma pathobiology. He investigates DNA methylation patterns, extracellular vesicle biomarkers, and liquid biopsy implementation in clinical neuro-oncology. Additional interests include surgical outcomes for epilepsy and aneurysm management. Article Trends: Over the last decade, Dr. Ricklefs has published extensively on: Extracellular vesicle applications as liquid biopsy markers DNA methylation subclasses for glioblastoma and meningioma Multicenter surgical outcome benchmarking Immune evasion mechanisms in neuro-oncology Technological innovations in neurosurgical visualization Molecular characterization of rare CNS tumors Professional Contributions: He co-authored the MISEV2023 guidelines for extracellular vesicle studies and participates in international consensus reviews for meningioma classification. His collaborations span institutions across Europe and North America.

Philip Booneمشاهده پروفایل

عضو هیئت علمی

• Medical Genetics
• Genomics
• Pediatric Genetics
• +۴ مورد دیگر

Philip Boone, MD, PhD, is an Attending Physician in the Division of Genetics and Genomics at Boston Children's Hospital and an Instructor of Pediatrics at Harvard Medical School. He specializes in medical genetics with particular expertise in rare disorders, medical mysteries, deletion and duplication syndromes, and Cornelia de Lange syndrome. Dr. Boone sees patients at Boston Children's Brookline location (2 Brookline Place, 7th Floor) and provides comprehensive genetic care including diagnostics, counseling, and individualized management. Stanford University (Undergraduate, 2006) Baylor College of Medicine (Graduate & Medical School, 2013-2014) Boston Combined Residency Program (Internship & Residency, 2016-2020) Harvard Medical School Genetics Training Program (Fellowship, 2020) Dr. Boone's research focuses on neurodevelopmental disorders, chromatin regulation, and genetic diagnostics. His work spans from fundamental genetic mechanisms to clinical applications, with particular emphasis on cohesinopathies including Cornelia de Lange syndrome. He has contributed significantly to understanding genetic variants associated with growth disorders, developmental features, and structural chromosomal abnormalities. His research combines advanced genomic technologies with clinical insights to improve diagnosis and management of rare genetic conditions. Analysis of Dr. Boone's publication record reveals a strong focus on medical genetics with emphasis on neurodevelopmental disorders, chromatin regulation, and genetic diagnostics. His work spans basic research on gene function and regulation to clinical applications in rare disease diagnosis. A notable trend is his investigation of cohesin complex disorders, particularly SMC3 variants and their relationship to Cornelia de Lange syndrome. His publications demonstrate expertise in both traditional genetic analysis and cutting-edge genomic technologies including long-read sequencing and telomere-to-telomere assembly. Dr. Boone actively contributes to medical education through publications on genetic diagnostics and distance learning resources for medical genetics. He has co-authored educational materials that help advance the field's knowledge base and training capabilities. As an attending physician in the Division of Genetics and Genomics at Boston Children's Hospital and a research fellow in the Center for Genomic Medicine at Massachusetts General Hospital, Dr. Boone works within one of the largest pediatric genetics practices in the country. The division includes over 30 board-certified clinical geneticists, genetic counselors, dieticians, and nursing staff who provide comprehensive care for patients with both common and extremely rare genetic conditions.

Xihong Linمشاهده پروفایل

استاد

• Statistical Machine Learning and AI
• Statistical Genetics and Genomics
• Causal Inference and Mediation Analysis
• +۴ مورد دیگر

Xihong Lin is a Professor of Statistics at Harvard University and a Professor of Biostatistics at the Harvard T.H. Chan School of Public Health. She is a distinguished academic, holding membership in both the National Academy of Sciences and the National Academy of Medicine. Her research focuses on scalable statistical inference for big data, statistical machine learning, causal inference, and integrative data analysis, with applications in genomics, public health, and precision medicine. Lin’s work addresses challenges in analyzing large-scale genomic and multi-ancestry data, including methods for rare variant association testing, ancestry-adjusted sample analysis, and scalable computing frameworks. Her contributions span biobank studies (e.g., UK Biobank, TOPMed) and clinical applications in lung cancer, cardiovascular health, and smoking cessation. Her scientific awards reflect her leadership in statistical genetics and public health. Key research trends include leveraging single-cell sequencing for functional genomics, developing ensemble machine learning methods for health subtyping, and enhancing polygenic risk prediction across diverse populations. Lin’s methodologies prioritize interpretability and scalability, enabling impactful analyses of complex observational and genomic datasets. Awards: Member, National Academy of Sciences; Member, National Academy of Medicine Her grants and advising efforts focus on interdisciplinary collaborations, bridging statistics, AI, and domain sciences. Lin leads initiatives to improve genomic data management and ethical use of federated data (e.g., FADI framework). She is affiliated with labs advancing statistical genetics and cloud-based workflows (e.g., STAAR workflow).

• Sublinear-time algorithms
• Error-correcting codes
• Computational complexity
• +۳ مورد دیگر

Elena Grigorescu is a Professor at the University of Waterloo, Department of Computer Science. She holds a Ph.D. from the Massachusetts Institute of Technology (2010), an M.S. from MIT (2006), and a B.A. from Bard College (2004). Her research focuses on sublinear-time algorithms, error-correcting codes, computational complexity, and learning theory. She explores foundational aspects of algorithms with constraints on time/space, privacy-preserving computation, and applications in graph theory and optimization. Her work includes advancements in spanner algorithms for network design, differential privacy in sublinear-time settings, and learning-augmented approaches for online optimization. Recent publications address trace reconstruction, privacy-utility trade-offs, and combinatorial optimization techniques. Grigorescu is actively involved in conferences like APPROX/RANDOM and IEEE Foundations of Computer Science, contributing to algorithmic theory and practical implementations. Her research emphasizes theoretical rigor while addressing real-world challenges in data analysis and distributed systems. No awards or formal advisees are explicitly listed in the provided information.