جستجوی استاد راهنمای دانشگاهی

Joseph A. Novemberمشاهده پروفایل

دانشیار

• History of Science and Technology
• Biomedical Computing
• History of Medicine
• +۳ مورد دیگر

Joseph A. November is an Associate Professor in the Department of History at the University of South Carolina, affiliated with the McCausland College of Arts and Sciences. His research focuses on the history of biomedical computing, distributed computing, and the intersection of technology and medicine. He holds a Ph.D. from Princeton University (2006), an M.A. from the University of Chicago (2002), and a B.A. from Hamilton College (1997). His work includes the award-winning book Biomedical Computing: Digitizing Life in the United States (2012), which explores the co-development of biomedicine and computing technologies. Current projects include Revolutions@home , examining distributed computing in protein folding research, and a biography of computing pioneer Robert S. Ledley. He has received grants from the NSF, NIH, and the Charles Babbage Institute. Teaching interests span the history of science and technology, including courses on the history of medicine, digital humanities, and the role of games in historical education. He actively contributes to professional organizations like SHOT and the History of Science Society. Awards include the Computer History Museum Prize (2013) and the National Institutes of Health DeWitt Stetten Fellowship (2007-2008). His research bridges historical analysis with contemporary issues in technology and biomedical ethics.

Polina Gollandمشاهده پروفایل

استاد

• Biomedical Image Analysis
• Medical Vision
• AI & Machine Learning
• +۸ مورد دیگر

Polina Golland is a Professor in the Department of Electrical Engineering and Computer Science (EECS) at MIT and a Principal Investigator in the Computer Science and Artificial Intelligence Laboratory (CSAIL). Her research focuses on developing novel techniques for biomedical image analysis and understanding, particularly in medical vision, AI/ML, and health care applications. She leads the Medical Vision Group and collaborates with the Vision Group at CSAIL. Her work emphasizes statistical modeling of medical images, shape modeling, and predictive analytics for biological processes. Current projects include fetal MRI analysis, cardiac MRI segmentation, and quantitative assessment of pulmonary edema in chest X-rays. She has secured grants from NIH, MIT-IBM Watson AI Lab, and other institutions to support her research. Dr. Golland teaches courses on inference, probability, and probabilistic systems. She advises graduate students in MIT's EECS program and has mentored numerous postdocs and researchers. Her lab focuses on translating advanced imaging techniques into clinical workflows, with applications in neuroimaging, fetal health monitoring, and cardiovascular disease analysis. Notable collaborations include work with Harvard Medical School affiliates, Brigham and Women's Hospital, and the MIT Jameel Clinic. Her research aims to bridge computational methods with clinical needs, improving diagnostic tools and treatment planning through machine learning and medical imaging innovation.

Guillermo Amadorمشاهده پروفایل

استادیار

• Biophysics
• Biomaterials
• Biomechanics
• +۷ مورد دیگر

Dr. Guillermo Amador is an Assistant Professor in the Experimental Zoology department at Wageningen University & Research. His research focuses on understanding how animals interact with complex environments through locomotion, adhesion, and fluid dynamics. He investigates biological systems like insects, plants, and marine organisms to inspire bio-engineered solutions for robotics, microfluidics, and material science. Amador received his PhD in Mechanical Engineering from Georgia Institute of Technology (USA), followed by postdoctoral research at the Max Planck Institute for Intelligent Systems (Germany) and a Marie Sklodowska-Curie fellowship at TU Delft (Netherlands). His expertise spans biophysics, biomaterials, and biomechanics, with a focus on self-cleaning mechanisms and bioadhesion. He collaborates with the 4TU consortium on Dutch Soft Robotics to develop bio-inspired designs. His work bridges fundamental biology with engineering applications, emphasizing interdisciplinary approaches to solve challenges in robotics and environmental science. Amador teaches courses including Biomimetics and Functional Zoology , integrating his research into education. His research highlights include studies on cuttlefish suction cups, stick insect adhesion, and pollen transport mechanisms in pollinators.

Andrew Stuartمشاهده پروفایل

استاد

• Applied and Computational Mathematics
• Bayesian Inverse Problems
• Data Assimilation
• +۶ مورد دیگر

Andrew Stuart is the Bren Professor of Computing and Mathematical Sciences at the California Institute of Technology (Caltech), joining in 2016. He previously held faculty positions at the University of Warwick (1999–2016), Stanford University (1992–1999), and Bath University (1989–1992). He earned his PhD from the University of Oxford's Computing Laboratory in 1986. Professor Stuart's research focuses on applied and computational mathematics , particularly Bayesian inverse problems , data assimilation for dynamical systems , and stochastic modeling . His work bridges mathematical theory, algorithm development, and applications in geophysics, materials science, and biological systems. His recent publications emphasize operator learning , machine learning for PDEs , and uncertainty quantification . Key areas include ensemble Kalman methods , Gaussian processes , and neural operators for solving and learning from complex systems. Scientific awards include the Vannevar Bush Faculty Fellowship and election to the Royal Society of Great Britain . He advises graduate students in applied mathematics, computational science, and geophysics, including Edoardo Calvello , Hojjat Kaveh , and Florian Wolf .

• Machine Learning
• Artificial Intelligence
• Neural Networks
• +۳ مورد دیگر

Geoffrey E. Hinton is a distinguished Professor in the Department of Computer Science at the University of Toronto. He is renowned for his foundational contributions to machine learning, particularly in the development of deep learning and neural networks. His research focuses on understanding learning processes in both artificial and biological systems, with key contributions including Boltzmann machines, backpropagation, and deep belief networks. He teaches advanced machine learning courses such as CSC2535, emphasizing topics like graphical models, variational inference, and deep learning architectures. His work has been published extensively in top journals and conferences, with recent papers exploring forward-forward algorithms, analog diffusion models, and scalable neural network training methods. Hinton has advised numerous PhD and master's students and collaborates with institutions like Vector Institute. He is a central figure in the global AI community, regularly presenting at conferences (e.g., 2023 talks on CBS 60 Minutes, BBC, and PBS). His lab focuses on advancing machine learning theory and applications, addressing challenges in vision, language, and generative models.

Tommi Jaakkolaمشاهده پروفایل

استاد

• Machine Learning
• Artificial Intelligence
• Computational Biology
• +۷ مورد دیگر

Tommi Jaakkola is the Thomas Siebel Professor of Electrical Engineering and Computer Science and the Institute for Data, Systems, and Society at the Massachusetts Institute of Technology. He received his MSc in theoretical physics from Helsinki University of Technology in 1992 and his PhD from MIT in computational neuroscience in 1997. After completing a postdoctoral position in computational molecular biology as a DOE/Sloan fellow at UCSC, he joined the MIT EECS faculty in 1998. His research advances how machines can learn, predict or control, and do so at scale in an efficient, principled, and interpretable manner. His work in machine learning extends from foundational theory to modern applications, focusing especially on statistical inference and estimation tasks that lie at the heart of complex learning problems. He designs new methods, theory and algorithms to automate the use and generation of semi-structured data such as natural language text, images, molecules, or strategies. Jaakkola applies and develops algorithms to solve multi-faceted recommender, retrieval, or inferential tasks (particularly in biomedical contexts), design and optimize molecules or reactions for drug design, and model strategic, game theoretic interactions. His recent work heavily focuses on diffusion models, protein structure prediction, molecular design, and generative AI, with significant publications in top conferences including ICML, NeurIPS, and ICLR. His scientific contributions span multiple disciplines with significant impact in both theoretical machine learning and practical applications in computational biology and chemistry, including notable work on antibiotic discovery published in Cell. Current advisees: Julia Balla, Bowen Jing, Hannes Stärk, Peter Holderrieth, Chenyu Wang Recent graduates: Gabriele Corso (Boltz PBC), Ezra Erives (DE Shaw), Jason Yim (Xaira) Jaakkola maintains an active research program through MIT's Computer Science and Artificial Intelligence Laboratory (CSAIL) and the Institute for Data, Systems, and Society (IDSS), with his office located in the Stata Center (32-G470). His work bridges theoretical machine learning with practical applications, making significant contributions to both the academic field and potential real-world impact in healthcare and drug discovery.

Romain Lopezمشاهده پروفایل

استادیار

• Single-cell omics
• Spatial transcriptomics
• Deep generative models
• +۵ مورد دیگر

Romain Lopez is an Assistant Professor of Computer Science and Biology at New York University, with a joint appointment in the Courant Institute of Mathematical Sciences and the Department of Biology. He will be joining NYU in September 2025, bringing expertise at the intersection of machine learning and computational biology. Prior to joining NYU, he was a Postdoctoral Fellow at Genentech and Stanford Medicine from 2021 to 2025, working with Jonathan Pritchard and Aviv Regev. Dr. Lopez received his educational training at prestigious institutions: PhD in Computer Science (2021) from the University of California, Berkeley, advised by Mike Jordan and Nir Yosef M.S. in Applied Mathematics (2016) from École polytechnique, Palaiseau, France Dr. Lopez's research focuses on developing machine learning methods to understand biological systems at the cellular level. His work bridges computational techniques with biological applications, particularly in single-cell and spatial omics analysis. He pioneered probabilistic approaches for single-cell analysis with scVI and co-developed scvi-tools, now widely adopted tools in the field. His research spans deep generative models, causal inference, perturbation modeling, and representation learning for biological data. His publication record demonstrates a consistent trajectory of innovation in computational biology, with recent work focusing on spatial biology, disentangled representations of cellular perturbations, and causal modeling of cellular responses. He has made significant contributions to the field of single-cell analysis, developing methods that help scientists interpret complex cellular data and predict how cells respond to various perturbations. Dr. Lopez has received numerous honors and awards for his research: Best Paper Award from the ICML Workshop on AI for Science (2024) Best Paper Award Honorable Mention from the AAAI Conference on Artificial Intelligence (2021) Best Student Poster Award from the ICML Workshop on Computational Biology (2019) UC Berkeley EECS Departmental Graduate Fellowship (2016) Carnot Foundation Fellowship (2016) Monahan Foundation Fellowship (2016) French National Defence Medal, Bronze Echelon (2014) At NYU, Dr. Lopez will lead the Biological Machine Learning group, which develops probabilistic machine learning methods to uncover biological mechanisms governing cellular behavior and disease. His lab focuses on creating tools that transform complex cellular data into biological insights, with applications in understanding cancer, immune responses, and fundamental cellular processes. His work has significant implications for precision medicine and drug discovery.

Shreyas Senمشاهده پروفایل

دانشیار

• VLSI and Circuit Design
• Human Body Communication (HBC)
• Hardware Security
• +۵ مورد دیگر

Shreyas Sen is the Elmore Associate Professor of Electrical and Computer Engineering at Purdue University, jointly affiliated with the School of Biomedical Engineering. He directs the Center for Internet of Bodies (C-IoB) and leads the SPARC Lab, focusing on circuits/systems for secure, energy-efficient body-centric communication and biomedical applications. Education: B.E. (Jadavpur University, 2006), M.S. & Ph.D. (Georgia Tech, 2009-2011). His research spans Human Body Communication (HBC), hardware security, IoT/IoB systems, and low-power sensing. Notable innovations include Electro-Quasistatic HBC (EQS-HBC) technology, which enables covert body-wire communication with 100x lower energy than conventional methods. Research Themes: Secure communication for medical wearables Physical layer security in IoT Ultra-low-power biosensors Side-channel attack mitigation in cryptographic ICs Publications: Over 200 papers in top venues (ISSCC, DAC, CICC, HOST) with focus on HBC systems, electromagnetic security, and biomedical circuits. Recent work explores EQS-HBC privacy properties (Nature Scientific Reports, 2019) and 350x current-domain signature attenuation for AES security (ISSCC 2020). Awards: NSF CAREER Award (2020) AFOSR Young Investigator (2016) MIT TR35 India (2018) 9 Best Paper Awards Intel Outstanding Researcher (2020) He advises over 20 students and leads industry collaborations through Ixana Inc. (founded 2020), commercializing EQS-HBC technology. Current efforts include EQS-based authentication systems and radiation dosimetry wearables.

Richard M. Murrayمشاهده پروفایل

استاد

• Control Theory
• Autonomous Vehicles
• Biological Circuit Design
• +۳ مورد دیگر

Richard M. Murray is the Thomas E. and Doris Everhart Professor of Control and Dynamical Systems and Bioengineering at the California Institute of Technology (Caltech). He holds a B.S. from Caltech (1985), M.S. from UC Berkeley (1988), and Ph.D. from UC Berkeley (1990). He has served in academic roles from Assistant Professor (1991–1997) to his current endowed professorship. He chaired the Engineering and Applied Science division (2000–2005) and Biology and Biological Engineering (2020–2024). His research focuses on feedback control in biological and autonomous systems, synthetic cells, and networked control systems. Collaborators include experts in robotics, synthetic biology, and systems biology. Key awards include the IEEE Control Systems Award and election to the National Academy of Engineering. His educational contributions span courses on control systems, robotics, and bioengineering. Current research projects include the Developer Cell initiative (Sloan Foundation), layered testing for autonomous systems (AFOSR), and microbiome-based environmental solutions (CHARMME, ARO). He advises numerous graduate students and postdocs, with notable alumni in academia and industry. Labs include facilities in Keck and Steele laboratories at Caltech. His work bridges control theory, synthetic biology, and autonomous systems to address societal challenges like environmental monitoring and safe autonomy.

• Environmental Health Engineering
• Wastewater-Based Epidemiology
• Bioremediation
• +۷ مورد دیگر

Rolf Halden is a Professor and Center Director at Arizona State University, holding appointments in the School of Sustainable Engineering and the Built Environment, the Biodesign Center for Environmental Health Engineering, and the Global Futures Scientists and Scholars program. He is a leading expert in environmental health engineering, wastewater-based epidemiology, and bioremediation. Education: Ph.D. in Civil (Environmental) Engineering, University of Minnesota (1997) M.S. in Civil (Environmental) Engineering, University of Minnesota (1994) M.S. in Biology, Technical University of Braunschweig, Germany (1992) Postdoctoral Fellow, Environmental Science, Lawrence Livermore National Laboratory (1998) Research Focus: Halden’s research integrates environmental chemistry, public health, and sustainability to understand how anthropogenic chemicals affect ecological and human health. His lab uses advanced mass spectrometry (LC-MS/MS, MALDI-TOF) to track pollutants such as PPCPs, microplastics, pesticides, and dioxins across air, water, soil, and biological systems. He pioneered the use of wastewater treatment plants as public health observatories, enabling real-time tracking of disease, drug use, and environmental exposures. Scientific Awards & Recognition: Leadership Award, Arizona State University (2018) Rocky Mountain Emmy Award (2018) Leroy E. Burney Lecturer, Johns Hopkins School of Public Health (2011) ACS Expert Program Member (2014–present) NIEHS Superfund R01 Working Group National Leader (2012–2014) Labs & Teams: Halden is the Founding Director of the Biodesign Center for Environmental Health Engineering at ASU, where he leads a multidisciplinary team focused on environmental proteomics, bioremediation, and diagnostic tool development. He also co-leads the Human Health Observatory , a national wastewater monitoring network. Grants & Funding: Halden has secured major funding from NSF, NIH, EPA, DoD, and private industry. Notable projects include the development of in-situ groundwater monitoring devices, national wastewater surveillance of SARS-CoV-2, and studies on microplastics and neurodegenerative disease.

• Machine Learning
• Explainable AI
• Neural Networks
• +۳ مورد دیگر

Jonas Fischer is the head of the Explainable Machine Learning group at the Max Planck Institute for Informatics, Department of Computer Vision and Machine Learning. His research focuses on interpreting complex machine learning models, particularly in genomics and healthcare, aiming to enhance robustness and alignment with human decision-making. Prior to his role at MPI, he was a postdoctoral fellow at Harvard University's Department of Biostatistics, where he worked on interpretable models for gene regulatory systems in cancer. Education: PhD in Computer Science from Saarland University (2022), with a thesis titled More than the sum of its parts , exploring the intersection of pattern mining and deep learning. He has contributed to advancing methods in neural network pruning, federated learning, and low-dimensional embeddings (e.g., dtSNE, Mercat). His work bridges computational biology, data mining, and machine learning, with applications in DNA methylation analysis, graph-based differential networks, and biomedical informatics. Key research areas include: (1) Explainable AI and neural network interpretability, (2) Biomedical applications of machine learning (e.g., gene regulatory networks, cancer genomics), (3) Low-dimensional embeddings and visualization techniques, (4) Federated learning for privacy-preserving collaborative models, and (5) Pattern mining for error analysis in NLP and classification tasks. Publications span top venues like NeurIPS, ICLR, Bioinformatics, and Genome Biology. His group develops tools such as BONOBO for omics data integration and node2vec2rank for scalable graph analysis. He actively collaborates with biomedical researchers to address challenges in data-driven healthcare and precision medicine.

• Artificial Intelligence
• Deep Learning
• Computer Vision
• +۵ مورد دیگر

Lior Wolf is a Professor at the School of Computer Science, Tel Aviv University. Previously, he was a postdoctoral researcher at MIT's Center for Biological and Computational Learning (CBCL) under Prof. Tomaso Poggio and earned his PhD from Hebrew University of Jerusalem with Prof. Amnon Shashua. His educational background includes: PhD in Computer Science, Hebrew University of Jerusalem Postdoctoral Research, MIT CBCL Prof. Wolf's research centers on artificial intelligence with seminal contributions to deep learning, computer vision, and natural language processing. His work bridges theoretical foundations (e.g., attention mechanisms, transformer analysis) with practical applications in medical imaging, speech processing, and sign language technology. He pioneered methods for neural network interpretability, efficient sequence modeling, and multimodal fusion. Analysis of his 2023-2025 publications reveals dominant trends in large language model optimization (neuron pruning, attention analysis), efficient video generation, and cross-modal learning. His work increasingly integrates medical applications (fMRI/EEG analysis) while maintaining theoretical rigor in model architecture design. His scientific achievements include: Best paper award at EMNLP 2024 for 'Backward Lens: Projecting Language Model Gradients into the Vocabulary Space' Best paper award at SCIA 2023 for 'Gradient Adjusting Networks for Domain Inversion' Best paper award at FG 2021 for 'Generating Master Faces for Dictionary Attacks' Prof. Wolf mentors graduate students in the School of Computer Science and leads research at the ICRC building laboratory. His team collaborates with 'the friends of TAU' on projects spanning biometric security, medical imaging, and generative AI. Current work focuses on efficient transformers, neural network interpretability, and multimodal medical diagnostics.

Jimeng Sunمشاهده پروفایل

استاد

• Artificial Intelligence
• Healthcare Analytics
• Drug Discovery
• +۵ مورد دیگر

Dr. Jimeng Sun is a Health Innovation Professor at the Siebel School of Computing and Data Science and Carle Illinois College of Medicine at the University of Illinois Urbana-Champaign. Co-founder of Keiji AI , he leads groundbreaking research at the intersection of artificial intelligence and healthcare, actively deploying clinical AI systems and developing frameworks like PyHealth and Therapeutics Data Commons . His research spans four major areas: Clinical AI Systems : Developing interpretable models (e.g., RETAIN) for patient similarity, temporal event prediction, medication recommendation, and clinical outcome forecasting Drug Discovery : Creating molecular optimization frameworks, drug-target interaction models, and AI-driven platforms Clinical Trials : Pioneering patient-trial matching, outcome prediction, and optimization frameworks using deep learning and graph neural networks Biosignal Analysis : Advancing sleep staging, seizure classification, and automated EEG/Cardiac monitoring systems With over 500 top-tier publications (including in Nature , NEJM AI , and leading AI conferences) and an h-index of 99, his work has been recognized with the Top 100 AI Leaders in Drug Discovery and Advanced Healthcare award. He maintains active collaborations with institutions like Massachusetts General Hospital , Medidata Solutions , and OSF Healthcare . His recent publications reveal a strong focus on: Reinforcement learning applications in medical data analysis Large language model adaptation for clinical tasks Knowledge graph integration with AI systems Synthetic data generation for healthcare Multi-modal learning in clinical contexts Explainable AI for medical applications Dr. Sun's lab ( Sunlab ) emphasizes practical impact over theoretical work, actively collaborating with hospitals and healthtech companies. He welcomes contributions from clinicians, researchers, and industry partners through initiatives like his AI for Health webinar series .

Hang Luمشاهده پروفایل

استاد

• Microfluidics
• Systems Biology
• Neuroscience
• +۶ مورد دیگر

Hang Lu is a Professor and holds the Cecil J. "Pete" Silas Chair of Chemical & Biomolecular Engineering at the Georgia Institute of Technology. Dr. Lu also holds a Love Family Professorship and leads the Lµ Fluidics Group, which focuses on engineering microfluidic systems and machine learning tools to address complex questions in neuroscience, developmental biology, and cell biology that are difficult to address with conventional techniques. Dr. Lu's research lies at the intersection of engineering and biology, with primary interests including: Microfluidic systems for high-throughput screens and image-based genetics and genomics Systems biology: large-scale experimentation and data mining Microtechnologies for optical stimulation and optical recording Big data, machine vision, and automation Developmental neurobiology, behavioral neurobiology, and systems neuroscience Cancer biology, immunology, embryonic development, and stem cells Her laboratory engineers microfluidic devices and BioMEMS to study neuroscience, genetics, cancer biology, and biotechnology. These miniaturized Lab-on-a-chip tools operate at scales comparable to biological systems, leveraging unique micro and nano-scale phenomena to gather large-scale quantitative data about complex biological systems. Current projects include Microfluidics for Life Sciences, Optical Neuron Recordings and Manipulations, Machine Learning Tools for Neuroscience, Measuring and Modeling Behavior, and High-throughput, High-content Cell-based Assays. Analysis of Dr. Lu's recent publications (2024-2025) reveals a strong trend toward integrating microfluidics with advanced computational methods: Development of deep learning frameworks for biological image analysis Advanced neuron tracking and functional imaging techniques Non-invasive characterization of 3D organoid cultures Sophisticated neuromechanical modeling of locomotion Microfluidic temperature control systems for in vivo studies Label-free imaging pipelines for neural development Dr. Lu's significant professional honors include: Cecil J. "Pete" Silas Chair of Chemical & Biomolecular Engineering Love Family Professorship The Lµ Fluidics Group actively mentors students and postdocs, currently accepting new postdoctoral researchers. The lab receives substantial funding for interdisciplinary projects at the engineering-biology interface, with research implications spanning fundamental biological understanding to therapeutic development. The group operates within Georgia Tech's School of Chemical & Biomolecular Engineering, with specialized facilities for microfluidic device fabrication, biological experimentation, and advanced imaging, maintaining strong collaborative ties across engineering, neuroscience, and biological disciplines.

Sriram Subramaniamمشاهده پروفایل

استاد

• cryo-electron microscopy
• structural biology
• drug-design
• +۴ مورد دیگر

Sriram Subramaniam is a Professor in the Department of Biochemistry and Molecular Biology at the University of British Columbia (UBC) and holds the Gobind Khorana Canada Excellence Research Chair in Precision Cancer Drug Design. His research leverages cryo-electron microscopy (cryo-EM) to advance structural biology and drug design, focusing on protein dynamics and therapeutic target identification. Education: PhD in Physical Chemistry (1987) from Stanford University; MSc in Chemistry (1981) from Indian Institute of Technology, Kanpur. Subramaniam's interdisciplinary work combines cryo-EM with computational tools and molecular biology to study protein structures at atomic resolution. His lab has pioneered cryo-EM applications in precision medicine, including mapping small molecule drugs on patient-specific cancer mutants. Recent publications (2024-2022) highlight his contributions to understanding SARS-CoV-2 immune evasion, structural mechanisms of ATPases, and AI integration in structural biology. His research spans viral entry mechanisms, CRISPR systems, and neurodegenerative disease pathways. Scientific Awards: Gobind Khorana Canada Excellence Research Chair NIH Director’s Award for Scientific Excellence Fellow of the Biophysical Society Breakthrough Prize nomination Based at the Djavad Mowafaghian Center for Brain Health, Subramaniam leads the Program in Cryo-EM Guided Drug Design, contributing to over 177 peer-reviewed publications with a career h-index of 58 and citations exceeding 12,340.