جست‌وجوی استاد و پژوهشگر

• Proteomics
• Systems Biology
• Protein Methylation
• +۵ مورد دیگر

Marc Wilkins is a Professor of Systems Biology at the University of New South Wales (UNSW) School of Biotechnology and Biomolecular Sciences. He currently serves as Deputy Dean (Research and Enterprise) for the Faculty of Science and leads the UNSW node of the $35M ARC Centre of Excellence in Mathematical and Statistical Frontiers (MACSYS). Previously, he directed the Ramaciotti Centre for Genomics (2011-2022) and the NSW Systems Biology Initiative. His research focuses on: Protein methylation networks and their regulatory functions in eukaryotic cells Large-scale analysis of protein-protein interactions using crosslinking mass spectrometry (XL-MS) Genomics and transcriptomics with expertise in next-generation sequencing Systems biology approaches combining proteomics, bioinformatics, and molecular biology He has published over 260 peer-reviewed papers and pioneered the concept of the 'proteome' in 1994. His publications demonstrate consistent focus on proteomics technology development, post-translational modifications, and multi-omics integration across diverse biological systems. Recent work emphasizes structural proteomics, methylation networks, and conservation genomics. Major Awards: Doctor of Science (D.Sc.) from UNSW (2017) ASBMB Beckman Coulter Discovery Science Award (2012) Elected Council Member of Human Proteome Organisation (2009-2024) He has supervised 38 honours students (6 University Medalists), 16 PhD students, and 5 Master's students. His ARC-funded laboratory focuses on proteomics and systems biology. Major grants include leadership in the $35M MACSYS Centre of Excellence and previous direction of genomics facilities funded by NCRIS, ARC LIEF, and NSW Government schemes. He co-founded two biotechnology companies: Tyrian Diagnostics (proteomic diagnostics) and Regeneus (regenerative medicine), both listed on the ASX. His team maintains expertise in cutting-edge proteomic and genomic technologies with strong industry collaborations.

• Liver Fibrosis
• Nonalcoholic Fatty Liver Disease
• Gene Regulatory Networks
• +۳ مورد دیگر

Elliot Jokl is a Researcher in the Division of Diabetes, Endocrinology & Gastroenterology. His work focuses on understanding fibrogenic mechanisms in liver diseases, particularly nonalcoholic fatty liver disease (NAFLD) and liver fibrosis. He employs spatial transcriptomics, single-cell RNA sequencing, and multi-omic approaches to study gene regulatory networks and cellular interactions in disease progression. Research interests include the role of SOX9 in myofibroblast activation, circadian rhythm disruption's impact on fibrosis, and the mechanotransduction pathways governing fibroblast behavior. His recent studies explore biomarkers for cystic fibrosis-related liver disease and therapeutic targets for fibrosis using novel spatial and genomic techniques. Notable projects include leading an initiative to identify early biomarkers of hepatocellular carcinoma using high-definition spatial transcriptomics (2025–2026). Collaborations span immunology, genetics, and computational biology to address fibrotic diseases across organs including liver, kidney, and lung. Key findings include SOX9's essential role in hepatic granuloma integrity during schistosomiasis, circadian disruption accelerating fibrosis progression in NAFLD, and PAK1-dependent mechanotransduction pathways in fibroblast nuclear adaptation. His work bridges basic science and clinical applications to improve diagnostics and therapeutic strategies for fibrotic disorders.

Jessica Marمشاهده پروفایل

استاد

• Bioinformatics
• Single-cell Biology
• Stem Cell Biology
• +۳ مورد دیگر

Professor Jessica Mar is a Professorial Research Fellow at the Australian Institute for Bioengineering and Nanotechnology (AIBN) at the University of Queensland. Her research focuses on developing bioinformatics methods to understand regulatory processes in human diseases, particularly leveraging single-cell RNA-sequencing to analyze cellular heterogeneity in contexts like cancer, aging, and stem cell biology. Key areas include modeling gene expression variability, analyzing transcriptomic data, and developing statistical frameworks for omics integration. She has led projects funded by grants such as the Georgina Sweet Award and ARC Future Fellowships. Her work spans computational approaches to cancer heterogeneity, senescence mechanisms in stem cells, and the impact of senolytic therapies on aging. Recent studies include applications of single-cell technologies to brain organoids and breast cancer metastasis. Awards include recognition for contributions to quantitative biomedical science and stem cell research. She collaborates widely, mentoring students in computational biology, stem cell biology, and systems biology. Publications highlight her contributions to understanding tumor heterogeneity, epigenetic dynamics, and the interplay between mechanics and cell reprogramming. Her lab’s work integrates machine learning with experimental biology, addressing challenges in data analysis for single-cell and spatial omics. Current projects include biomarker discovery for hypoxic-ischemic encephalopathy and developing optimal transport models for cancer progression analysis.

• Bioinformatics
• Computational Biology
• Single-Cell RNA Sequencing
• +۶ مورد دیگر

Christoph Ziegenhain is an Assistant Professor at the Karolinska Institute , affiliated with the Department of Medical Biochemistry and Biophysics . He leads the Ziegenhain Lab , which focuses on molecular processes in human cells, particularly the control of alternative splicing in transcribed mRNAs. His group integrates novel single-cell sequencing techniques with computational biology to advance understanding in these areas. Position: Assistant Professor Institution: Karolinska Institute Department: Medical Biochemistry and Biophysics Lab: Ziegenhain Lab Christoph Ziegenhain's research spans Bioinformatics , Computational Biology , and Single-Cell RNA Sequencing . His work emphasizes transcriptional dynamics , alternative splicing , and the development of high-throughput sequencing methods like Smart-seq3xpress and Prime-seq . Current projects analyze gene expression noise, allelic imbalance, and the role of long noncoding RNAs in regulation. The Ziegenhain Lab's recent publications demonstrate expertise in single-cell transcriptomics , multi-omics profiling , and method development for RNA sequencing. Key subfields include transcriptional bursting , redox signaling , epithelial homeostasis , and hematopoietic stem cell differentiation . Swedish Research Council Grant (2023–2026): "Decoding the interplay of regulation and stochasticity in alternative mRNA splicing" Lab members include doctoral students Shiyao Chen and Constantin Diekmann , research assistants Cleo Damon , Zhouhui Qi , and Lukas Schertler , and affiliated researchers such as Gandolfo Gennaro and Ursa Zevnik . Collaborations with institutions like New York University and Stanford University highlight his interdisciplinary approach.

Regine Dressمشاهده پروفایل

پژوهشگر

• Immunology
• Systems Immunology
• Dendritic Cells
• +۳ مورد دیگر

Regine Dress is a Researcher at the Faculty of Medicine , University of Hamburg , affiliated with the Center for Molecular Neurobiology Hamburg (ZMNH) and the Institute of Systems Immunology . She is based at the University Medical Center Hamburg-Eppendorf (UKE) in Hamburg, Germany. Her research focuses on Immunology , Systems Immunology , and Neurobiology . She specializes in the development and function of Dendritic Cells and Mononuclear Phagocytes , including their roles in Inflammatory Diseases , Vaccine Development , and Neurodegenerative Disorders . Her work leverages Single-Cell RNA Sequencing and large-scale ImmGen datasets to explore cellular metabolism and differentiation. Regine has co-authored numerous high-impact studies in Nature Immunology , Nature Communications , and Immunity , with recent contributions to SARS-CoV-2 vaccine platforms and Biliary Atresia immunopathology . She collaborates with international teams and contributes to standardizing Flow Cytometry protocols in immunological research. Contact: r.dress@uke.de

Keith Vanceمشاهده پروفایل

مدرس ارشد

• Non-coding RNA Biology
• Gene Regulation
• Chromatin Dynamics
• +۴ مورد دیگر

Keith Vance is a Senior Lecturer in the Department of Life Sciences at the University of Bath. His research focuses on non-coding RNA biology, particularly the role of long non-coding RNAs (lncRNAs) in transcriptional regulation, chromatin dynamics, and cancer progression. Institution: University of Bath Department: Life Sciences Research Themes : Discovery of novel lncRNA regulators in cellular growth and differentiation Mechanistic studies of lncRNA function in melanoma biology Elucidating trans-acting lncRNA genomic targeting principles Chromatin remodeling and gene expression networks Recent Collaborative Projects : Light Sheet Fluorescence Microscopy infrastructure development Identification of lncRNA regulators in melanoma

Ying Cheongمشاهده پروفایل

استاد

• Reproductive Endocrinology
• Fertility Preservation
• Endometriosis
• +۷ مورد دیگر

Professor Ying Cheong is a faculty member at the University of Southampton with the academic rank of Professor in Reproductive Medicine. Her research spans multiple interdisciplinary areas, including reproductive endocrinology, fetal monitoring technologies, and clinical trials in assisted reproductive technologies. Research Groups: Institute for Life Sciences Centre for Health Technologies Microfluidics and Sensors Developmental Physiology and Medicine Institute of Developmental Sciences Scientific Awards: Letrozole for improving fertility in women with polycystic ovary syndrome (2018) Current Research Trends: Ying Cheong's recent articles focus on dietary interventions in male fertility, e-textile applications for fetal monitoring, endometriosis treatment, and clinical trials evaluating ART outcomes. Her work bridges reproductive medicine with biomedical engineering, particularly in developing novel sensing technologies. Supervision: She actively supervises PhD students including Lydia May Newman, Victoria Dodhia, Ka Ying Bonnie Ng, and Molly Rutt. Her research teams often combine expertise from medicine and engineering disciplines.

Jan Pennekampمشاهده پروفایل

پژوهشگر

• Industrial Internet of Things (IIoT)
• Security and Privacy
• Privacy Enhancing Technologies (PETs)
• +۸ مورد دیگر

Jan Pennekamp is a postdoctoral researcher at the Chair of Communication and Distributed Systems (COMSYS) within the Department of Computer Science at RWTH Aachen University. He is a member of the Security and Privacy research group and is actively involved in the Cluster of Excellence 'Internet of Production,' where he serves as deputy workstream coordinator. His academic journey includes a B.Sc. and M.Sc. in Computer Science from RWTH Aachen, with exchange studies at Aalto University and an internship at the University of Luxembourg. His research interests center on security and privacy in the Industrial Internet of Things (IIoT), privacy-enhancing technologies (PETs), secure computation, and interdisciplinary applications in healthcare, particularly synthetic data and single-cell genomics. He has led and contributed to numerous research projects, including CALCIPROTECT, RFC, RUST, SUSTAINET-guardian, and SYNCLIVER. His methodological focus includes both technical innovation and rigorous evaluation in real-world scenarios. His recent publications demonstrate a strong trend toward privacy-preserving data sharing in industrial and healthcare contexts, leveraging techniques such as confidential computing, blockchain, and machine learning. His work bridges computer science with industrial engineering and clinical research, emphasizing secure, interoperable, and accountable data ecosystems. Scientific Awards: Klaus Tschira Boost Fund Fellow 2025 Attendee of the 12th Heidelberg Laureate Forum 2025 Young Researcher Award 2022, Cluster of Excellence Internet of Production ICT Young Researcher Award 2021 TDWI Award 2018 (best master thesis) Google Scholarship 2018 Finalist, Artifacts Competition and Impact Award at ACSAC 2022 Outstanding Reviewer Award, TheWebConf/WWW 2024 Jan has advised numerous B.Sc. and M.Sc. theses on topics ranging from privacy-preserving benchmarking to intrusion detection and blockchain-based accountability. He has received research stipends and travel grants from RWC and ACSAC and has held leadership roles in academic service, including organizing conferences and serving on program committees for top venues like IEEE S&P, CCS, and EuroS&P. He is also a Certified ScrumMaster and RWTH Research Manager, reflecting his strong project and team leadership skills. He is actively engaged in interdisciplinary research labs and teams, particularly within the 'Internet of Production' initiative, collaborating with industrial partners and medical researchers to develop secure and privacy-preserving information systems for real-world applications.

Gunvant Baliram Patilمشاهده پروفایل

استادیار

• Genetic Engineering
• Translational Genomics
• Genome Editing
• +۱۲ مورد دیگر

Dr. Gunvant Baliram Patil is an Assistant Professor at Texas Tech University, jointly affiliated with the Institute of Genomics for Crop Abiotic Stress Tolerance (IGCAST) and the Department of Plant and Soil Sciences. His research focuses on advancing genetic engineering and genomics to improve crop resilience and productivity. Institution: Texas Tech University School: Institute of Genomics for Crop Abiotic Stress Tolerance Department: Department of Plant and Soil Sciences Position: Assistant Professor Email: gunvant.patil@ttu.edu Office: 210B, Experimental Science Building II Dr. Patil holds a B.S. from North Maharashtra University, India, an M.S. and Ph.D. from the University of Pune and National Center for Plant Biotechnology, New Delhi. He previously served as a research scientist at the University of Minnesota-St. Paul, a postdoctoral associate at the University of Missouri-Columbia, and a visiting researcher at the Swedish University of Agricultural Sciences. His research interests include genetic engineering, genome editing, translational genomics, and crop improvement under abiotic stress. He aims to develop genotype-independent transformation systems in recalcitrant crops such as soybean, cotton, and sorghum. His lab integrates CRISPR/Cas9, single-cell transcriptomics, and high-throughput phenotyping to dissect molecular mechanisms of stress tolerance and nutrient uptake. The recent publications reflect a strong focus on soybean genomics, stress response mechanisms, and gene-editing technologies. Trends include the use of RNA-Seq, CRISPR-based editing, and functional characterization of gene families (e.g., SWEET, TIP, XIP) involved in transport, stress, and defense. His work increasingly emphasizes tissue culture-free editing and single-cell resolution in plant systems. 2nd place in Oral Presentation at PSS-Symposium-2024 (mentored student) 3rd place in Oral Presentation at SICNA Conference 2024 (mentored student) USDA – Sustainable Agriculture Research and Education Grant (mentored student) Dr. Patil advises multiple graduate students and postdoctoral researchers and leads a dynamic research team at the Patil Lab. His research is supported by grants from USDA-NIFA, United Soybean Board, Southern Soybean Research Program, and TTU-BASF (Project Revolution). He teaches graduate courses such as PSS5325: Transgenic and Plant Cell Genetics, emphasizing CRISPR, gene silencing, and recombinant DNA technology. The lab is actively involved in projects on nutrient uptake efficiency, regeneration system development, and durable resistance to soybean cyst nematode. The team utilizes cutting-edge tools like protoplast transformation, single-nucleus RNA sequencing, and high-throughput phenotyping to achieve translational outcomes in crop improvement.

Andrea Münsterbergمشاهده پروفایل

استاد

• Developmental Biology
• Embryonic Development
• Cell Fate Specification
• +۱۴ مورد دیگر

Andrea Münsterberg is Professor of Developmental Biology in the School of Biological Sciences at the University of East Anglia (UEA). She leads a research group focused on the molecular and cellular mechanisms of embryonic development, particularly using chick embryos as a model system. Her work intersects with stem cell science and regenerative medicine, and she is a member of the Cells and Tissues research theme. She has held key administrative roles including Director of Research (2014–2017) and Theme Leader for Cells and Tissues (2010–2013). PhD, National Institute for Medical Research, MRC, Mill Hill, London (1992) German Diploma in Biology, University of Heidelberg (1988) Her research focuses on how cell fate decisions are regulated during vertebrate embryogenesis, especially in somite-derived tissues (muscle, bone, cartilage) and heart development. She investigates signaling pathways, cytoskeletal dynamics, microRNA function, and gene regulatory networks using molecular, genetic, and imaging techniques. Her group employs single-cell genomics and chromatin accessibility profiling to map developmental trajectories. The recent publications and active projects reveal a strong emphasis on transcriptional regulation, chromatin landscape analysis, cardiac progenitor biology, and somite patterning. Her work increasingly leverages cutting-edge technologies like single-cell RNA sequencing and spatial transcriptomics to understand developmental processes at high resolution. Collaborations with researchers such as G. Wheeler and S. Moxon highlight an interdisciplinary approach. Her scientific awards include prestigious fellowships from the Human Frontier Science Program Organization (HFSPO), Muscular Dystrophy Association (MDA), and the Wellcome Trust, all awarded competitively early in her career. She has supervised PhD students and postdoctoral researchers, welcoming applications from candidates seeking funding via fellowships (e.g., EU Marie Curie) or named postdoc positions on grants. She has secured significant research funding from the British Heart Foundation and the Biotechnology and Biological Sciences Research Council (BBSRC) for multiple projects investigating cardiac development, somite maturation, and gene regulation. She leads a dynamic, international research group that benefits from shared facilities such as the Henry Wellcome Bioimaging Lab and Taqman qPCR systems. The group collaborates closely with the Wheeler lab through joint lab meetings and co-led projects, and actively participates in the Cell and Developmental Biology seminar series and international conferences.

Felix Schmittمشاهده پروفایل

استاد

• Anesthesiology
• Intensive Care Medicine
• Sepsis
• +۴ مورد دیگر

Prof. Felix Schmitt is a Professor and Senior Consultant in the Department of Anesthesiology at Heidelberg University Hospital. He holds roles including Deputy Transplantation Officer, Head of the Sepsis and Systemic Inflammation Section, and leader of research groups in Hemostaseology and Airway Management. His academic career includes a Habilitation in Anesthesiology, a Master of Health Business Administration (MHBA), and extensive clinical and research experience in critical care, sepsis, and perioperative medicine. Affiliations: Universitätsklinikum Heidelberg, Heidelberg University. Roles: Deputy Medical Director, Section Head, Working Group Leader, and member of multiple clinical committees. Research focuses on sepsis pathophysiology, coagulopathy in trauma, microbiome influences on disease, and translational biomarker discovery. Key areas include perioperative management, point-of-care diagnostics, and critical care interventions. His work spans clinical trials, translational research, and surgical outcomes optimization. Grants & Awards: Multiple competitive grants from DZL, DZIF, and industry collaborations. Notable awards include recognition for poster presentations on TLR8 inhibition and clinical innovation. Education & Training: Medical degree (2012), MHBA (2012), and specialized training in anesthesia, critical care, and research methodologies.

• Mycobiome Analysis
• Fungal Infections
• Transcriptomics
• +۳ مورد دیگر

Danielle Weaver is a Researcher at the University of Manchester within the Division of Immunology, Immunity to Infection and Respiratory Medicine . Her work focuses on mycobiome analysis, fungal infections, and transcriptomics, contributing to UN Sustainable Development Goals related to global health challenges. She has co-developed novel diagnostics for fungal infections and investigated the role of RNA interference in fungal pathogenesis. Education & Research: Dr. Weaver holds a PhD in Microbiology from the University of Manchester (2018), focusing on N-linked glycosylation in Campylobacter species. Her research integrates next-generation sequencing (NGS), metagenomics, and transcriptomics to study microbial communities in respiratory diseases and infectious pathogens. Research Themes: Mycobiome dynamics in critically ill patients (e.g., post-COVID-19) Functional genomics of Aspergillus fumigatus RNAi pathways Bacterial glycosylation as a target for diagnostic tools Collaborations & Impact: Her work bridges fundamental research and clinical applications, with studies published in BMC Microbiology , RNA , and Frontiers in Microbiology . She collaborates internationally on fungal diagnostics and respiratory infection mechanisms.

Andrea Caporaliمشاهده پروفایل

مدرس ارشد

• Non-coding RNA
• Vascular Diseases
• Angiogenesis
• +۵ مورد دیگر

Dr Andrea Caporali is a Senior Lecturer at the Centre for Cardiovascular Science (University of Edinburgh), focusing on vascular biology and post-ischaemic regeneration. Their research integrates cutting-edge approaches like high-content screening, RNA sequencing, and pre-clinical imaging. Investigates non-coding RNA mechanisms in vascular pathophysiology and regeneration Examines dysregulation of endothelial cell communication under hypoxic/ischaemic conditions Applies functional genomics and loss-of-function studies to validate novel vascular targets Current projects address impaired angiogenesis in diabetes/obesity and explore hemodynamical forces in vascular remodeling. The lab has identified new regulatory pathways impacting capillary growth and collateralization in vivo . Scientific Awards Chancellor's Fellow (University of Edinburgh) Research group members include David Mellis (Research Fellow) and Elisa Parish (Research Technician).

• RNA Processing
• Alternative Splicing
• Gene Expression Regulation
• +۵ مورد دیگر

Sherif Abou Elela is a researcher affiliated with the University of Sherbrooke and its Centre de recherche du CHUS . His work focuses on RNA processing, stability, and alternative splicing, with implications in cancer biology and gene expression regulation. Education: Postdoctorate, University of California, Santa Cruz (1997) PhD in Biology, University of Guelph (1994) BSc, University of Qatar (1987) Research Interests: RNA processing and stability in gene expression, splicing program modulation in cancer and stress, snoRNA biology, yeast RNA metabolism, and RNA-binding proteins. He explores how RNA decay and splicing mechanisms can inform mammalian models and human disease diagnostics. Article Trends: Recent work emphasizes snoRNA annotation tools (e.g., SnoBIRD), stress-induced splicing adaptations (cells resist starvation), yeast RNase III roles in gene regulation, and cancer-specific non-coding RNA interactions (e.g., H/ACA snoRNAs). Computational approaches (snoDB, SAPFIR, snoGloBe) and yeast as a model organism are recurring themes. Patents & Contributions: He holds patents for methods to reprogram splice site selection and cancer biomarker discovery. He organized the Ribo Club conference, indicating leadership in RNA research.

• HPV-associated cancers
• Molecular virology
• Machine learning
• +۶ مورد دیگر

Sara Arroyo Muhr is a Senior Research Specialist and Docent at the Karolinska Institutet , affiliated with the Department of Clinical Science, Intervention and Technology and the Center for Cervical Cancer Elimination . She serves as Scientific Lead at the International HPV Reference Center and coordinates global HPV diagnostic initiatives through the Global HPV LabNet . Education : PhD from Karolinska Institutet (2016), Docent (2025) Her research spans HPV-associated cancers , molecular virology, machine learning applications in cancer prevention, and microbiome interactions in cervical carcinogenesis. She leads Sweden’s cervical cancer elimination project and self-sampling programs in conflict zones like Ukraine. Her work integrates next-generation sequencing and bioinformatics to address diagnostic challenges in HPV testing. Recent publications highlight advancements in HPV genotyping software (HPV-KITE) , quality assurance for HPV DNA testing, microbiome analysis in cervical and anal cancers, and vaccine immunogenicity studies. Key collaborations include international proficiency trials for HPV diagnostics and large-scale registry-based cervical screening research. Teaching roles include lecturing in molecular diagnostics , genomics , and antiviral drugs at undergraduate and graduate levels, alongside PBL tutoring and supervision of five PhD students. She also develops online educational resources for the International HPV Reference Center.