جست‌وجوی استاد و پژوهشگر

• Microbial Genomics
• Gut Microbiome
• Aging and Healthy Aging
• +۴ مورد دیگر

Paul O'Toole is a Professor of Microbial Genomics and Principal Investigator at the APC Microbiome Ireland, University College Cork. His research focuses on the gut microbiome's role in health, aging, and disease, particularly in the context of diet and probiotics. He leads projects like the ELDERMET study on elderly nutrition and the NU-AGE project exploring Mediterranean diets' anti-aging effects. He holds a BA (Mod.) from Trinity College Dublin and a PhD from Lund University, with postdoctoral training in Canada and New Zealand. Key grants include studies on dairy-derived microbiota, probiotic strain improvement, and microbiome analysis in aging populations. He has published extensively on Lactobacillus genomics, gut-brain interactions, and microbiome-driven health outcomes. His work bridges fundamental microbiology with clinical applications, emphasizing translational research. Scientific highlights include discovering microbiome links to cognitive decline, demonstrating dietary modulation of gut microbes to combat obesity, and identifying keystone species in healthy aging. He advocates for sustainability in conservation and food systems, reflecting his interdisciplinary approach to global health challenges.

• Microbiology
• Infectious Diseases
• Cell Biology
• +۷ مورد دیگر

Manuel R. Amieva is a Professor at Stanford University School of Medicine , holding joint appointments in Pediatrics - Infectious Diseases and Microbiology & Immunology . He is also a member of the Maternal & Child Health Research Institute (MCHRI) . His clinical practice at Stanford Medicine Children's Health focuses on pediatric infectious diseases. Education: Medical Education: Stanford University School of Medicine (1997) Fellowship: Stanford University Pediatric Infectious Disease Fellowship (2004) Internship & Residency: Stanford Health Care at Lucile Packard Children's Hospital (1998-1999) Dr. Amieva's research investigates host-pathogen interactions at epithelial barriers, with specific expertise in Helicobacter pylori , Listeria monocytogenes , Salmonella enterica , and Staphylococcus aureus . His lab develops innovative organoid culture systems with controlled polarity to study microbial colonization and oncogenic mechanisms. Key discoveries include: H. pylori's manipulation of epithelial junctions via the CagA protein Listeria's exploitation of cell extrusion sites for invasion Staphylococcus toxin interactions with adherens junctions Gastric stem cell activation by pathogens Recent publication trends show continued leadership in infectious disease mechanisms (2020-2025), with a focus on: Pathogen-specific epithelial breach strategies Organoid modeling of viral/bacterial interactions Redox-dependent host factor regulation Single-cell spatial transcriptomic analyses Multi-institutional educational frameworks His scientific collaborations span disciplines including: Gastric cancer genomics initiatives COVID-19 lung infection models Stem cell-microbe interactions Medical education reform projects Dr. Amieva maintains active clinical research while mentoring students in both the Microbiology & Immunology and Pediatrics programs. His lab at Stanford employs advanced 3D confocal microscopy and organ-on-a-chip technologies to visualize epithelial colonization dynamics.

Waldemar Kolanusمشاهده پروفایل

استاد

• Molecular Immunology
• Cell Signaling
• Signal Transduction Pathways
• +۴ مورد دیگر

Prof. Waldemar Kolanus leads the Molecular Immunology and Cell Biology department at the University of Bonn's Life & Medical Sciences Institute (LIMES) . His research bridges immunoregulation , stem cell dynamics , and metabolic stress responses in immune cells. Unit 2 member at LIMES Principal investigator in SFB 704 and ImmunoSensation Cluster Leads a multidisciplinary lab with postdocs, PhD students, and technical staff His work focuses on intracellular signaling pathways connecting immune activation to tissue homeostasis, particularly through: Cytohesin proteins in integrin-mediated adhesion and migration TRIM71 in stem cell regulation and congenital hydrocephalus High-salt environments affecting macrophage function Publication trends show expertise in immune cell migration , genetic models , and chemical inhibition , with frequent use of mice and zebrafish for in vivo studies. Key articles explore: TRIM71's dual role in auditory development and germ cell maintenance Cytohesin family's Golgi regulation and insulin signaling Ruxolitinib's off-target migration inhibition of dendritic cells Contact details: Address: LIMES Institute, Carl-Troll-Straße 31, Bonn Email: kolanus.sekretariat@uni-bonn.de Phone: +49 228 73-62788

Jennifer L Clarkeمشاهده پروفایل

استاد

• Statistical Methodology
• Bioinformatics/Computational Biology
• Data Mining/Machine Learning
• +۳ مورد دیگر

Jennifer L. Clarke is a Professor in the Department of Statistics at the University of Nebraska–Lincoln and Director of the Quantitative Life Science Initiative. She holds leadership roles in enabling big data integration across the University of Nebraska system through collaborative research programs. Her affiliations include the Institute of Agriculture and Natural Resources (IANR) and the College of Agriculture and Natural Resources. Dr. Clarke's research focuses on statistical methodology for high-dimensional data, computational biology, bioinformatics, and bacterial genomics. Her work bridges statistical innovation with applications in oncology, microbiome analysis, and agricultural phenomics. Key areas include predictive modeling, machine learning, and genomic/metagenomic data integration. Her recent publications span cancer biomarker discovery, plant phenotyping methodologies, and microbial community analysis, reflecting her interdisciplinary approach. Articles emphasize translational applications like therapeutic target identification and precision agriculture. Dr. Clarke leads initiatives fostering collaboration between statisticians and domain scientists, including the Quantitative Life Science Initiative and contributions to the Agricultural Genome-to-Phenome Initiative (AG2PI). Her work advances data-driven solutions for healthcare and food security challenges. Notable projects include developing statistical tools for microbiome studies, analyzing root architecture via 3D imaging, and investigating cranberry-derived compounds' cancer-inhibitory mechanisms. Her methodological contributions include hybrid clustering techniques and predictive model validation frameworks.

Lawrence Goodridgeمشاهده پروفایل

استاد

• Food Safety
• Antibiotic Resistance
• Foodborne Pathogens
• +۶ مورد دیگر

Lawrence Goodridge is a Professor and Director of the Canadian Research Institute for Food Safety (CRIFS) at the University of Guelph's Ontario Agricultural College. He holds the Leung Family Professorship in Food Safety and leads research at the intersection of food safety, antibiotic resistance, and One Health principles. His work focuses on applying genomic technologies to study foodborne pathogens (E. coli, Salmonella, Listeria, Cronobacter) and leveraging wastewater surveillance for infectious disease outbreak prediction. Academic History: BSc Microbiology (University of Guelph, 1995), MSc Food Microbiology (2003), PhD Food Microbiology (2002), followed by post-doctoral training in Food Safety at the University of Georgia (2002). Joined CRIFS in 2003. Research Interests: Genomic analysis of pathogen emergence, wastewater-based epidemiology, bacteriophage applications, and consumer education strategies for food safety. His lab develops innovative methods for rapid pathogen detection in food systems and environmental samples. Articles Trends: Over 100 peer-reviewed publications emphasize genomic surveillance of foodborne pathogens and SARS-CoV-2, with a focus on wastewater sampling innovations. Recent work explores multi-modal data integration for public health forecasting and ethical data protection frameworks for surveillance programs. Awards: While no specific prizes are listed, his $50M+ research funding from Canadian/international sources underscores recognition of his impactful work. Grants support projects like phage-based sanitization and antimicrobial resistance tracking. Advising & Labs: Leads CRIFS laboratory operations and collaborates globally on food safety initiatives. His research has informed food industry guidelines and policy frameworks for mitigating pathogen risks in agricultural and environmental systems.

Anil Kumarمشاهده پروفایل

استادیار

• Molecular Virology
• Virus-host Interactions
• Innate Immune Response
• +۳ مورد دیگر

Dr. Anil Kumar is an Assistant Professor in the Department of Biochemistry, Microbiology & Immunology at the University of Saskatchewan's College of Medicine. He specializes in molecular virology, focusing on positive-stranded RNA viruses and their interactions with host immune systems. His research employs high-throughput genetic screens and reverse genetics systems to identify host factors critical for viral infection. Education includes a BSc in Agricultural Sciences (1999, Kerala Agricultural University), MSc in Plant Pathology (2001, Indian Agricultural Research Institute), and PhD in Molecular Virology (2010, University of Heidelberg). Postdoctoral training included stints at the University of Heidelberg (2010–2013) and the University of Alberta (2014–2020). Research interests center on Eastern Equine Encephalitis virus (EEEV) and Enterovirus D68 (EV-D68). For EEEV, his lab investigates immune evasion mechanisms and host-virus protein interactions to identify therapeutic targets. For EV-D68, they study CNS invasion mechanisms and novel host dependency factors linked to acute flaccid myelitis (AFM). Recent work includes studies on SARS-CoV-2, uncovering roles for host proteins like Argonaute 2 in viral restriction. His lab integrates molecular biology, virology, and systems biology approaches, with a focus on translational research for antiviral drug development. Collaborations include work on respiratory syncytial virus (RSV) entry mechanisms and dengue virus replication regulation.

Michael Baymمشاهده پروفایل

دانشیار

• Microbial Evolutionary Genomics
• Antibiotic Resistance
• Computational Biology
• +۷ مورد دیگر

Dr. Michael Baym is an Associate Professor of Biomedical Informatics at Harvard Medical School with affiliate appointments in Microbiology and the Laboratory of Systems Pharmacology, and as an Associate Member of the Broad Institute. He leads the Baym Lab, which studies microbial evolutionary genomics and antibiotic resistance through a hybrid of experimental, computational, and theoretical approaches. His research focuses on: Antibiotic Resistance Evolution and practical interventions Mobile Genetic Elements (plasmids, phages, transposons) Computational Genomic Algorithms for big data analysis Synthetic Biology tools and technologies Key recent publications explore phage discovery systems , phylogenetic compression of microbial genomes, and RNA-guided gene drives in plasmids. His work is supported by multiple NIH/NIGMS and NSF grants including a MIRA award. Scientific honors include: Packard Fellowship (2018) Pew Biomedical Scholarship (2020) Sloan Research Fellowship (2020) A. Clifford Barger Excellence in Mentoring Award (2021) SSQBio Mentorship Award (2022) The lab actively trains PhD students and postdoctoral fellows with alumni occupying academic and industry positions globally. Current team members include researchers from interdisciplinary backgrounds working at the intersection of experiment, computation, and theory .

Hector Aguilar-Carrenoمشاهده پروفایل

استاد

• Virology
• Paramyxoviruses
• Viral Entry Mechanisms
• +۷ مورد دیگر

Hector Aguilar-Carreno is a Professor of Virology in the Department of Microbiology and Immunology at Cornell University's College of Veterinary Medicine, where he also serves as Associate Vice Provost in the Office of the Vice President for Research and Innovation. His research focuses on high-mortality paramyxoviruses including Nipah virus (NiV) and Hendra virus (HeV), as well as coronaviruses and other enveloped viruses. Dr. Aguilar-Carreno received his BS in Biochemical Engineering from Instituto Tecnologico de Tepic, Mexico, followed by an MS in Biology from California State University, Los Angeles, and a PhD in Biochemistry and Molecular Biology from the University of Southern California. He completed postdoctoral training in Virology at UCLA under Dr. Benhur Lee before becoming an Assistant Professor at Washington State University's Paul G. Allen School for Global Animal Health. His research spans four main areas: (1) Viral entry mechanisms, where his lab has identified novel domains in viral glycoproteins important for membrane fusion; (2) Viral egress, using multi-omics approaches to study viral assembly and budding; (3) Vaccine development using viral-like particles to generate neutralizing antibodies; and (4) Antiviral discovery targeting enveloped viruses. His lab employs innovative techniques including Flow Virometry and Raman Spectroscopy to study viral entry processes. Analysis of his recent publications reveals a strong focus on paramyxoviruses (particularly Nipah and Hendra viruses), coronavirus research, and the development of broad-spectrum antivirals. His work spans fundamental virology to translational applications, with numerous publications in high-impact journals including Nature, Science, and Cell Reports. President Elect of the American Society of Virology Chair of the American Society of Virology Diversity, Equity, and Inclusion committee Chair of the Cornell CVM Diversity Committee Director of the Cornell Program for Achieving Career Excellence Chair of 16 PhD student thesis committees Dr. Aguilar-Carreno has served on numerous scientific committees including the American Society for Virology Education Committee, the American Society of Microbiology Committee for Minority Education, and as a Standing Member of the VIR-A NIH study section. His leadership extends to chairing the Cornell CVM Diversity Committee and serving on the Cornell presidential postdoctoral fellowship committee, demonstrating significant commitment to diversity and mentorship in science.

Gregory C. Grayمشاهده پروفایل

استاد

• Infectious Disease Epidemiology
• One Health Approach
• Occupational Disease Transmission
• +۴ مورد دیگر

Gregory C. Gray, MD, MPH, FIDSA is a Professor in Infectious Disease Epidemiology at the University of Texas Medical Branch (UTMB) in Galveston, Texas, with appointments across multiple departments including Internal Medicine (Infectious Diseases), Microbiology & Immunology, and Global Health & Emerging Diseases. Dr. Gray has conducted epidemiological studies of infectious diseases for over 25 years across five continents, with a particular focus on occupational disease transmission, especially respiratory viruses. His research has examined farmers, veterinarians, turkey workers, swine workers, poultry workers, horse workers, cattle workers, hunters, and military personnel. He pioneered the Millennium Cohort Study, a prospective cohort study of approximately 300,000 people projected to continue through 2068, and has led numerous large-scale vaccine trials. As a strong advocate for the One Health approach, Dr. Gray has established One Health centers in the USA, Romania, and China, and developed four graduate programs in One Health (PhD, MHS, and certificates). His recent research focuses on zoonotic spillover events, universal influenza vaccines, and coronavirus detection in agricultural settings, with numerous publications in 2024-2025 addressing H5N1 avian influenza, respiratory virus transmission, and environmental health impacts. Selected honors include: Department of Defense Legion of Merit Medal Secretary of Defense Medal for Outstanding Public Service Medal of Honor from Mongolia's Minister of Health The Peace Medal awarded by the President of Mongolia University of Texas Medical Branch Robert E. Shope, MD Professorship Dr. Gray has authored over 350 peer-reviewed manuscripts cited more than 21,000 times (H-index 76). His current research portfolio includes multiple active grants from the USDA, Fogarty International Center, and private industry focusing on zoonotic disease surveillance, influenza vaccines, and coronavirus detection in agricultural settings. He has mentored numerous students and established international collaborations across six continents.

Ross Meentemeyerمشاهده پروفایل

استاد

• Geospatial Analytics
• Ecological Forecasting
• Biological Invasions
• +۳ مورد دیگر

Ross Meentemeyer is a Professor and Director of the Center for Geospatial Analytics at North Carolina State University, affiliated with the Department of Forestry and Environmental Resources in the College of Natural Resources. He holds a Ph.D. in Geography from the University of North Carolina, Chapel Hill (2000) and a B.S. in Geography from the University of Georgia (1993). His research focuses on geospatial analytics, ecological forecasting, biological invasions, and forest health, with a strong emphasis on integrating geospatial data and modeling to address environmental challenges. Dr. Meentemeyer's work includes developing decision-support tools for pest management, climate adaptation, and land-use planning. Notable projects involve forecasting invasive species spread via international trade, creating open-source geospatial platforms, and modeling floodplain development risks. He collaborates extensively with federal agencies like USDA, DOI, and NPS to translate research into practical solutions. His grants include multi-million dollar NSF and USDA-funded initiatives addressing plant disease pandemics, agricultural pest threats, and geospatial infrastructure development. Key outcomes include the PAdb system for pandemic prediction and the FUTURES model for urbanization forecasting. He also leads efforts to enhance stakeholder engagement through participatory modeling tools like Tangible Landscape. Research contributions span 20+ years, with over 100 peer-reviewed articles on topics like viewscape modeling, river water dynamics, and wildfire-epidemic interactions. His work bridges ecological and social sciences, emphasizing actionable solutions for sustainable land management and climate resilience.

• Biogeochemistry
• Microbiology
• Soil Science
• +۳ مورد دیگر

Ferran Garcia-Pichel is a Regents Professor and Center Director at Arizona State University’s School of Life Sciences, affiliated with the Biodesign Center for Fundamental & Applied Microbiomics, Center for Biodiversity Outcomes, Water Institute, and Global Drylands Center. He holds a PhD in Microbiology from the University of Oregon (1999) and has been a faculty member at ASU since 1999. His research focuses on microbial adaptations in arid environments, including biogeochemical cycling, soil crust formation, and sustainable land restoration. Key interests include cyanobacterial sunscreen compounds (scytonemin), carbonate dissolution mechanisms, and hydrogen production. Teaching responsibilities include advanced microbiology, microbial ecology, and geomicrobiology courses such as MBB 495 Undergraduate Research and BIO 493 Honors Thesis. Awards span from the 2021 Regents Professor distinction to the 2023 Sperry Award for restoration science. His lab explores interdisciplinary approaches to study microbial communities in desert soils, marine intertidals, and atmospheric dust, with applications in climate resilience and biomedicine. Research highlights include biocrust restoration strategies, microbial nitrogen fixation networks, and the role of GABA/Glu signaling in spatial organization. Collaborations address global challenges like fugitive dust mitigation and carbon sequestration. The lab is based at the Biodesign Building B on ASU’s Tempe campus.

Ryan Zielsمشاهده پروفایل

دانشیار

• Environmental Engineering
• Microbial Ecology
• Sustainable Wastewater Treatment
• +۵ مورد دیگر

Dr. Ryan Ziels is an Associate Professor in the Department of Civil Engineering at the University of British Columbia's Faculty of Applied Science. His research focuses on sustainable biological wastewater treatment and resource recovery through advanced microbial biotechnologies, with affiliations to the BioProducts Institute and Clean Energy Research Centre. Education: PhD and MSE in Civil and Environmental Engineering, University of Washington BS in Environmental Resources Engineering, Humboldt State University Research Focus: Ziels pioneers microbial ecology studies in engineered waste treatment systems, employing multi-omics approaches to optimize anaerobic digestion for biomethane production and biological nutrient removal. His work targets recovery of water, nutrients, and bioenergy while enhancing human and environmental health through microbial community engineering. Publication Trends: Recent publications (2022-2025) reveal intensified focus on metaproteomics for syntrophic metabolism characterization, high-throughput sequencing for microbial community analysis, and wastewater-based epidemiology for pathogen surveillance. His research increasingly integrates ethical frameworks for public health applications while advancing fundamental understanding of microbial processes in anaerobic systems. Academic Engagement: Ziels teaches core courses including Fundamentals of Environmental Engineering (CIVL 204), Environmental Lab Analysis (CIVL 407), and Environmental Biotechnology (CIVL 569). He supervises graduate students in Civil Engineering and Genome Science and Technology programs through UBC's Graduate and Postdoctoral Studies, directing the EMBERr Lab for microbiome engineering research.

Betsy Foxmanمشاهده پروفایل

استاد

• Infectious Disease Epidemiology
• Human Microbiome Research
• Antibiotic Resistance
• +۵ مورد دیگر

Betsy Foxman serves as the Hunein F. and Hilda Maassab Professor of Epidemiology at the University of Michigan School of Public Health. She directs three major initiatives: the Center for Molecular and Clinical Epidemiology of Infectious Diseases, the Integrated Training in Microbial Systems program, and the Certificate in Healthcare Infection Prevention & Control. Her academic leadership spans decades with continuous research contributions. Dr. Foxman earned her PhD and MSPH from UCLA (1983, 1980) and BS from UC Berkeley (1977). Her research centers on infectious disease transmission, microbiome ecology, antibiotic resistance, and wastewater surveillance . Key projects include analyzing the oral microbiome in dental caries using genomic methods, studying nose/throat microbiome associations with respiratory infections in nursing facilities, and developing wastewater monitoring for antibiotic-resistant pathogens. Her work integrates next-generation sequencing with epidemiological analysis to identify novel interventions. Publication trends reveal consistent focus on microbiome-pathogen interactions across multiple body sites (oral, vaginal, gut, respiratory). Recent articles demonstrate methodological innovation in wastewater epidemiology (2024 Norovirus GII monitoring) and clinical applications like predicting vancomycin-resistant enterococci contamination (2023 Lancet study). Her research bridges molecular microbiology with population health, emphasizing translational potential for diagnostics and public health interventions. Fellow of the Infectious Disease Society of America Fellow of the American College of Epidemiology Fellow of the American Academy of Microbiology Dr. Foxman's advising portfolio includes numerous NIH-funded projects on microbiome dynamics and infection control. Her leadership in the Center for Molecular and Clinical Epidemiology drives collaborative research across departments. Current initiatives focus on wastewater surveillance standardization and microbiome-based diagnostics for infection prevention. She maintains active laboratories for genomic analysis of microbial communities and clinical sample processing.

Kyu Y. Rheeمشاهده پروفایل

استاد

• Tuberculosis
• Antibiotic Resistance
• Metabolomics
• +۳ مورد دیگر

Kyu Y. Rhee is a Professor of Medicine and Professor of Microbiology and Immunology at Weill Cornell Medical College . His research focuses on Mycobacterium tuberculosis , with emphasis on metabolic pathways , antibiotic resistance mechanisms , and drug development . Research highlights include: Multi-omic approaches to TB drug discovery Mechanistic studies of antibiotic action Deciphering TB transmission genetics Metabolomics-driven target identification Current funding includes: Bill & Melinda Gates Foundation : AI/ML-assisted bacterial permeability platform National Institute of Allergy & Infectious Diseases : UM1 TB drug regimen design consortium National Heart, Lung, & Blood Institute : Studies on M. tuberculosis PE/PPE proteins and fructose-induced cancer He has authored over 50 publications on TB metabolomics, drug development, and pathogen persistence. His work bridges systems biology , chemical biology , and clinical research to address antimicrobial resistance.

Martin Kaltenpothمشاهده پروفایل

استاد

• Insect Symbiosis
• Evolutionary Ecology
• Chemical Ecology
• +۲ مورد دیگر

Martin Kaltenpoth serves as Director at the Max Planck Institute for Chemical Ecology in Jena since 2020 and Professor for Evolutionary Ecology at Johannes Gutenberg University of Mainz since 2015. Previously, he led the Research Group Insect Symbiosis at the MPI for Chemical Ecology from 2009 to 2015. Education: PhD in Biology (summa cum laude), University of Würzburg, 2006 Diploma in Biology (with honors), University of Würzburg, 2003 His research centers on insect-bacterial symbioses , investigating evolutionary, ecological, and chemical dimensions of host-microbe interactions. Key foci include nutritional and defensive symbiosis in beetles, genomic adaptations of symbiotic bacteria, and chemical mediation of symbiotic relationships. His work bridges entomology, microbiology, and chemical ecology to unravel coevolutionary mechanisms. Analysis of recent publications reveals dominant trends in beetle-microbe systems, emphasizing symbiont roles in cuticle synthesis, antifungal defense, and host-plant adaptation. His studies frequently employ genomic, biochemical, and experimental approaches across diverse insect lineages. No scientific awards were documented in the source material. While specific advisees and grants remain unlisted, his leadership of research groups and dual academic appointments indicate active supervision of graduate researchers and externally funded projects in symbiosis evolution. Currently directing research at the Max Planck Institute, Kaltenpoth advances understanding of symbiotic systems with implications for evolutionary theory and sustainable pest management strategies.