جستجوی استاد راهنمای دانشگاهی

Harris H. Wangمشاهده پروفایل

دانشیار

• Systems Biology
• Synthetic Biology
• Genome Engineering
• +۱۷ مورد دیگر

Harris H. Wang is an Associate Professor in the Department of Systems Biology and Department of Pathology and Cell Biology at Columbia University's Vagelos College of Physicians and Surgeons, where he also serves as Interim Chair of Systems Biology. He is affiliated with the Center for Computational Biology and Bioinformatics (C2B2) and the Integrated Program in Cellular, Molecular and Biomedical Studies (CMBS). B.S., Physics and Mathematics, MIT Ph.D., Biophysics, Harvard University Dr. Wang's research lies at the intersection of systems and synthetic biology, focusing on developing foundational technologies for genome engineering, microbiome manipulation, and synthetic genomics. His lab pioneers methods such as MAGE, MAGIC, CAST, and CAMII to enable high-throughput genetic manipulation, in situ microbiome engineering, and AI-driven microbial culturomics. Key research themes include understanding microbial community dynamics, engineering cellular memory systems, designing biocontained genetic circuits, and applying synthetic biology to human health challenges in personalized medicine and infectious disease. His recent publications reveal a strong trend in spatial and functional metagenomics, CRISPR-based microbiome editing, and synthetic biology tools for data storage and genetic stability. The articles span high-impact journals like Nature , Science , and Nature Biotechnology , reflecting his leadership in developing scalable, programmable biological systems. Scientific Awards: NIH Director’s Early Independence Award Forbes 30 Under 30 in Science Sloan Research Fellowship NSF CAREER Award ONR Young Investigator Award Burroughs Wellcome Fund PATH Award Schaefer Scholar Blavatnik National Award Vilcek Prize PECASE Dr. Wang has advised numerous PhD and postdoctoral researchers, many of whom have gone on to independent scientific careers. His lab is supported by major grants from NIH, NSF, DARPA, DOE, and foundations including the Bill & Melinda Gates Foundation and CZ Biohub NY. He is actively involved in educational initiatives, including organizing Columbia’s iGEM team and the Cold Spring Harbor Laboratory Synthetic Biology course. The Wang Lab is based at the Columbia University Irving Medical Center and is part of national consortia such as the Engineering Biology Research Consortium (EBRC) and the Genome Project-Write (GP-Write) initiative. The lab develops and applies cutting-edge technologies in automation, machine learning, and synthetic biology to engineer microbiomes for applications in medicine, global health, and climate change.

Dawn Y. Sumnerمشاهده پروفایل

استاد

• Geobiology
• Paleobiology
• Geochemistry
• +۳ مورد دیگر

Dawn Y. Sumner is a Professor in the Department of Earth and Planetary Sciences at the University of California, Davis. Her research focuses on geobiology, paleobiology, and planetary science, particularly reconstructing ancient environments on Earth and Mars. She is a key member of NASA’s Mars Science Laboratory team, contributing to the Curiosity rover’s exploration of Gale Crater on Mars. Sumner’s work integrates field studies, lab analyses, and interdisciplinary approaches to understand microbial life’s role in shaping Earth’s history and potential habitability on other planets. Education: Ph.D., Massachusetts Institute of Technology (1995). Research interests include microbialite formation, Antarctic lake ecosystems, and the evolution of oxygenic photosynthesis. She investigates modern microbial communities in ice-covered lakes (e.g., Lake Vanda) to understand ancient environments and their biosignatures. Her scientific awards include the California Academy of Sciences Academy Fellow (2020) and Geological Society of America Fellow (2014). Sumner emphasizes inclusive education and supports student success in STEM through feminist research practices. Labs/Teams: W.M. Keck Center for Active Visualization in the Earth Sciences (KeckCAVES), Antarctic Lake Research Group.

Ning Zhangمشاهده پروفایل

استادیار

• Plant Defense Mechanisms
• Genome Editing Technologies
• Crop Improvement
• +۳ مورد دیگر

Ning Zhang is an Assistant Professor in the Biology Department at James Madison University (JMU), joining in 2024. Her research focuses on enhancing crop resilience through molecular and biochemical studies of plant defense mechanisms against bacterial pathogens, alongside developing genome editing technologies for trait improvement. She holds a PhD in Horticulture and Crop Science from The Ohio State University (2016), an MS in Silviculture from Zhejiang Agriculture and Forestry University (2011), and a BS in Landscape Architecture from Shandong Agricultural University (2008). Research Interests: Dr. Zhang's lab investigates plant immunity pathways, CRISPR/Cas9 genome editing applications, and engineering crops for disease resistance. Her work integrates molecular biology, genetics, and biochemistry to tackle challenges posed by climate change and biotic/abiotic stresses. Recent Trends in Publications: Her articles concentrate on MAPK signaling pathways, NLR protein interactions, PP2C phosphatase regulation, and bacterial effector mechanisms in tomato and other crops. Key themes include immune system activation, pathogen recognition diversity, and transgenic plant development. Lab Information: The Zhang Lab at JMU is part of the Department of Biology, focusing on plant biotechnology solutions for agricultural sustainability. They collaborate on projects involving CRISPR-based gene editing and stress tolerance research.

Ryo Morimotoمشاهده پروفایل

پژوهشگر ارشد

• Evolutionary Biology
• Immunology
• Genome Editing
• +۲ مورد دیگر

Ryo Morimoto is a Research Fellow and Group Leader at the Department of Molecular Biology, Umeå University, affiliated with Molecular Infection Medicine Sweden (MIMS). He leads studies on the evolutionary foundations of adaptive immunity and host genome editing mechanisms. MD (2011) and PhD (2017) from University of Tokyo Postdoctoral work at Max Planck Institute for Immunobiology & Epigenetics (2017-2024) Project Leader (2022) and Group Leader (2024) at MIMS His research explores antigen receptor diversification in jawless vertebrates, evolutionary emergence of lymphopoietic systems, and self-tolerance mechanisms. Using non-conventional models, his lab integrates in vitro biochemistry, single-cell omics, and computational genomics to address genome integrity challenges in adaptive immunity. The lab's recent publications highlight evolutionary insights into immune system development and its implications for human immunity. Research focuses on conserved enzyme families mediating genome editing and their biotechnological applications. Ryo Morimoto's team emphasizes multicultural collaboration, interdisciplinary training, and skill development for early-career scientists. The lab maintains partnerships with Umeå Centre for Microbial Research (UCMR) and employs in vivo techniques alongside molecular and computational approaches.

Daniel Segrèمشاهده پروفایل

استاد

• Systems Biology
• Metabolic Engineering
• Microbial Ecology
• +۷ مورد دیگر

Professor Daniel Segrè is a faculty member at Boston University, holding the title of Professor of Biology, Bioinformatics, and Biomedical Engineering. His research focuses on systems biology, microbial ecology, and metabolic engineering, with an emphasis on understanding complex biological networks and their applications in bioenergy and biomedicine. Segrè leads the Segre Lab ( segrelab.bu.edu ), where theoretical and computational approaches are applied to study metabolism, microbial interactions, and synthetic biology. Segrè earned his PhD from the Weizmann Institute of Science, Israel. His work bridges fundamental science and applied engineering, addressing topics such as microbial community dynamics, metabolic pathway design, and environmental microbiome applications. Research Interests: Systems biology of metabolism, evolution of biochemical networks, microbial interactions, bioinformatics, and environmental microbiome engineering. His lab develops computational models (e.g., COMETS) to simulate microbial ecosystems and design synthetic microbial communities for climate change mitigation and bioenergy production. Teaching: Courses include BE 777 (Computational Genomics), BF 821 (Bioinformatics Seminar), and BF 571 (Dynamics and Evolution of Biological Networks). These courses reflect his expertise in integrating computational methods with biological systems analysis.

Gabriel Birzuمشاهده پروفایل

استادیار

• Microbial Ecology
• Evolutionary Dynamics
• Population Genetics
• +۳ مورد دیگر

Gabriel Birzu is an Assistant Professor in the Department of Physics at the University of Florida. He develops quantitative models of microbial ecology and evolution using statistical physics approaches. His research investigates fine-scale diversity in microbial communities, examining how spatial processes shape evolutionary trajectories. Recent work analyzes hybridization barriers in cyanobacteria and genealogical patterns during range expansions. Birzu's interdisciplinary approach combines theory, computation, and data analysis to understand microbial diversification mechanisms and community responses to environmental perturbations.

Corrie Moreauمشاهده پروفایل

استاد

• Evolutionary Patterns and Processes
• Organismal Biology
• Plant-animal Interactions
• +۱۳ مورد دیگر

Corrie Moreau is the Martha N. & John C. Moser Professor of Arthropod Biosystematics and Biodiversity at Cornell University, serving as Director & Curator of the Cornell University Insect Collection. She holds affiliations with the Department of Ecology and Evolutionary Biology and the College of Arts and Sciences. Her research focuses on symbiotic factors driving speciation, adaptation, and diversification in insects, particularly ants. Moreau’s work integrates molecular methods, next-generation sequencing, and field-based research to study biodiversity across scales. Education: Ph.D. in Organismic and Evolutionary Biology from Harvard University (2007), M.Sc. in Biology from San Francisco State University/California Academy of Sciences (2003), B.S. in Biology from San Francisco State University (2000). Research Interests: Evolutionary patterns/processes, organismal biology, plant-animal interactions, chemical ecology, sustainability, and microbiome dynamics. Her lab (Moreau Lab) investigates ant-microbe symbioses, host-microbe interactions, and the role of symbioses in macroevolutionary processes. Recent work includes studies on ant phylogenetics, gut microbiome evolution, and the impact of invasive species on native ecosystems. Publications highlight her contributions to understanding ant evolution, microbial symbiosis, and biogeography. Grants include NSF-funded projects on ant genomics and symbiosis. She advocates for natural history collections and their role in biodiversity research and education.

• Virology
• Molecular Biology
• Genomics
• +۶ مورد دیگر

James Van Etten is the William Allington Distinguished Professor of Plant Pathology at the University of Nebraska-Lincoln, affiliated with the School of Biological Sciences and Nebraska Center for Virology. His research focuses on chloroviruses—large dsDNA viruses infecting Chlorella-like algae—with emphasis on DNA replication, restriction systems, and membrane transport proteins. Key research themes include: Viral DNA modification systems Host-virus interactions Structural virology Evolution of organellar genomes Recent work analyzed: SMRT sequencing of viral methylation patterns Chlorovirus cryopreservation methods Potassium channel biophysics Host chemical signaling mechanisms Lab webpage: vanettenlab.unl.edu

Waldemar Kolanusمشاهده پروفایل

استاد

• Molecular Immunology
• Cell Signaling
• Signal Transduction Pathways
• +۴ مورد دیگر

Prof. Waldemar Kolanus leads the Molecular Immunology and Cell Biology department at the University of Bonn's Life & Medical Sciences Institute (LIMES) . His research bridges immunoregulation , stem cell dynamics , and metabolic stress responses in immune cells. Unit 2 member at LIMES Principal investigator in SFB 704 and ImmunoSensation Cluster Leads a multidisciplinary lab with postdocs, PhD students, and technical staff His work focuses on intracellular signaling pathways connecting immune activation to tissue homeostasis, particularly through: Cytohesin proteins in integrin-mediated adhesion and migration TRIM71 in stem cell regulation and congenital hydrocephalus High-salt environments affecting macrophage function Publication trends show expertise in immune cell migration , genetic models , and chemical inhibition , with frequent use of mice and zebrafish for in vivo studies. Key articles explore: TRIM71's dual role in auditory development and germ cell maintenance Cytohesin family's Golgi regulation and insulin signaling Ruxolitinib's off-target migration inhibition of dendritic cells Contact details: Address: LIMES Institute, Carl-Troll-Straße 31, Bonn Email: kolanus.sekretariat@uni-bonn.de Phone: +49 228 73-62788

Stefan Helmreichمشاهده پروفایل

استاد

• Anthropology of Science
• Oceanography
• Sound Studies
• +۳ مورد دیگر

Stefan Helmreich is the Elting E. Morison Professor of Anthropology at MIT, where his research examines how scientists conceptualize fundamental phenomena—especially waves—across oceanography, biology, acoustics, and computing. His interdisciplinary work bridges anthropology, science studies, and media theory. Core research themes include: Cultural and scientific constructions of ocean waves Marine microbial ecologies and alien oceans Sound studies and transduction theories Multispecies ethnography Scientific visualization practices Helmreich's publications demonstrate consistent engagement with wave phenomena as both physical forces and cultural symbols, exploring how scientific representations of waves shape environmental understanding. His award-winning books trace connections between marine science, cosmology, and media technologies. He has received numerous prestigious awards including a Guggenheim Fellowship and multiple book prizes from anthropological associations. Helmreich maintains creative collaborations through projects like 'Wave Count'—a musical exploration of wave representations across genres.

Lucas Paoliمشاهده پروفایل

پژوهشگر

• Microbiome Research
• Microbial Immunity
• Ecological Genomics
• +۴ مورد دیگر

Lucas Paoli is a Researcher and Course Instructor at École Polytechnique Fédérale de Lausanne (EPFL), Switzerland. He leads the Paoli Lab (Microbiome Immunity and Ecology) within the Global Health Institute (GHI) under the School of Life Sciences (SV). His roles include scientific collaboration and teaching responsibilities in life sciences engineering. Paoli holds a PhD in Microbiome Research from ETH Zürich (2018-2023), an M.Phil. in Environmental Policy from the University of Cambridge (2017-2018), and an M.Sc. in Ecology and Evolution from École normale supérieure (2015-2017). Research Focus: His work bridges microbial immunity and ecology, investigating how microbes defend against viral infections across ecosystems like oceans and human microbiomes. Techniques include global-scale metagenomics and functional genomics to study immune strategies and ecological interactions. Key themes involve microbial community dynamics, viral defense mechanisms, and the impact of environmental factors on microbial immunity. Lab & Education: The Paoli Lab explores microbiome-immunity interactions with a focus on ecological contexts. Paoli supervises PhD students in Life Sciences Engineering. His research outputs span microbial ecology, metagenomic tool development, and marine microbiome studies. Contact: lucas.paoli@epfl.ch, AAB 1 39, +41 21 693 16 99.

Amy E. Fraleyمشاهده پروفایل

استادیار

• Natural Products Biosynthesis
• Biotechnology
• Biochemistry
• +۶ مورد دیگر

Amy E. Fraley is an Assistant Professor at ETH Zürich, Department of Chemistry and Applied Biosciences, and leads the Medicinal Chemistry Research Group. Her cross-disciplinary work bridges natural products biosynthesis, pharmaceutical sciences, and environmental sustainability through enzymatic chemistry and biotechnology. BSc in Chemistry, Millersville University of Pennsylvania (2014) PhD in Medicinal Chemistry, University of Michigan College of Pharmacy (2019) Postdoctoral work at ETH Zürich Institute of Microbiology under Prof. Jörn Piel Her research focuses on harnessing biosynthetic enzymes (e.g., halogenases, monooxygenases, Diels-Alderases) to create sustainable bioactive metabolites. She explores natural product biosynthesis in fungi and marine bacteria, targeting disease mechanisms and green chemistry applications. Recent work includes metagenomic studies of Lake Chilika microbial mats and polyketide synthase engineering. Notable scientific awards include the 2024 JSP Fellow at Bürgenstock Conference, 2018 Rackham Predoctoral Fellowship, and multiple University of Michigan honors. Her group secured funding from the ETH4D Doctoral Mentorship Grant and Messerli Foundation . Collaborations span structural biology, synthetic chemistry, and microbiology, with key contributions to flavoenzyme characterization and bioactive compound libraries . The lab emphasizes interdisciplinary training and innovation in biocatalytic tools for organic synthesis.

• Behavioral Ecology
• Evolutionary Biology
• Population Ecology
• +۱۱ مورد دیگر

Prof. Dr. Oliver Krüger is a behavioral ecologist and evolutionary biologist at Bielefeld University 's Faculty of Biology , where he leads the Department of Animal Behaviour since 2013. His research spans avian and marine mammal systems, focusing on life history strategies, parasite-host interactions, and environmental adaptation. Education: Biology studies at Bielefeld University (1994-1996) MSc in Oxford (1996-1997) PhD at Bielefeld University with Fritz Trillmich and Jan Lindström (1998-2000) Research Themes: Behavioral ecology, evolutionary biology, and population dynamics across tropical and temperate ecosystems. Key projects include NC³ (Niche Choice/Construction) and studies on Galápagos sea lions, common buzzards, and pinniped species. Scientific Leadership: Spokesperson, SFB TRR 212 "NC³" (2018-2025) Advisory Board member: German Ornithologists Union, IUCN SSC pinniped group, German Primate Centre Peer review roles: Humboldt Foundation, DFG, HFSP, NSF Awards: Leopoldina Prize (2001) Niko Tinbergen Award (2008) DFG Heisenberg Professorship (2010-2015)

Katy D. Heathمشاهده پروفایل

استاد

• Microbiome and Microbial Communities
• Evolutionary Genetics
• Symbiosis and Mutualism Evolution
• +۳ مورد دیگر

Katy D. Heath is a Professor of Plant Biology and Affiliate Professor in Microbiology at the University of Illinois Urbana-Champaign (UIUC). She leads the Plant Biology department and is affiliated with the Carl R. Woese Institute for Genomic Biology. Her research focuses on the evolution of mutualisms, particularly plant-microbe interactions such as legume-rhizobium symbiosis, emphasizing genetic and ecological factors influencing symbiotic stability and adaptation. She investigates how environmental pressures (e.g., global change) shape mutualistic relationships and microbial community dynamics. Education: B.S. (2000) and Ph.D. (2007) from the University of Illinois and University of Minnesota, respectively, followed by postdoctoral work at the University of Toronto (2007–2009). Research Interests: Symbiosis evolution, microbial genetics, plasmid transmission dynamics, and the impacts of agricultural practices on rhizobia populations. She studies diverse systems, including Medicago-Sinorhizobium, soybean-Bradyrhizobium, and invasive legume-rhizobium interactions. Recent publications (2020–2025) highlight studies on endophyte impacts on soybean yield, rhizobia diversity under conventional farming, and genomic analyses of symbiotic coevolution. Her work integrates molecular biology, quantitative genetics, and ecology. Grants & Collaborations: Lead PI on a $12.5M NSF Biology Integration Institute (Genomics and Eco-evolution of Multi-scale Symbiosis). Her team includes collaborations with institutions like Indiana University and the University of Chicago. Labs & Teams: Heath Lab focuses on symbiosis research, with active projects on microbiome dynamics, plasmid-host coevolution, and community outreach (e.g., Boys and Girls Club collaborations). Recent lab highlights include student graduations (e.g., Ivan Sosa Marquez, Chase) and awards like the John R. Laughnan Award in Plant Biology.

• Microbial Biofilms
• Environmental Microbiology
• Antibiofilm Drug Development
• +۴ مورد دیگر

Staffan Kjelleberg is a Distinguished University Professor at Nanyang Technological University (NTU), Singapore, and Director of the Singapore National Biofilm Consortium (SNBC) and Singapore Centre for Environmental Life Sciences Engineering (SCELSE). He holds previous positions as Scientia Professor at the University of New South Wales (UNSW), Australia, and has led major research initiatives globally. His academic career spans over four decades, with roles including Head of School at UNSW and Professorships at the University of Gothenburg, Sweden. Education: BSc (Chemistry and Biology, 1975), PhD (Microbiology, 1981), and Docent (Microbiology, 1983) from the University of Gothenburg. He has authored over 384 journal papers with significant citations, reflecting his leadership in microbial biofilm research. Research focuses on microbial biofilms and microbiomes, addressing environmental sustainability, public health, and industrial applications. He employs an interdisciplinary approach to study biofilm community dynamics, matrix properties, and translational technologies for biofilm control. Key contributions include discoveries on quorum sensing inhibitors, biofilm dispersal mechanisms, and eDNA roles in biofilm structure. Honours include Fellowships from the Australian and American Academies of Microbiology, Web of Science Highly Cited Researcher status, and Editor roles for 15 international journals. He leads major programs like the Marine Climate Change Science initiative and has co-directed global research centers such as the Centre for Marine Bio-Innovation. Advising and grants: While specific student names are not listed, his extensive leadership in research programs indicates mentorship of numerous scholars. His work bridges fundamental and applied microbiology, impacting environmental and biomedical fields. Labs/Teams: Directs SCELSE and SNBC, co-founded the Centre for Marine Bio-Innovation, and collaborates internationally on biofilm and microbiome research.