جست‌وجوی استاد و پژوهشگر

Courtney Thaxtonمشاهده پروفایل

دانشیار

• Biocuration
• Clinical Genetics
• Genomics
• +۵ مورد دیگر

Courtney Thaxton, PhD, is an Associate Professor in the Department of Genetics at the University of North Carolina School of Medicine. She directs the ClinGen-affiliated UNC Biocuration and Coordination Core, overseeing clinical domain working groups and expert panels within the ClinGen initiative. Her research focuses on developing computational methods for biocuration, refining gene-disease validity frameworks, and establishing standardized nomenclature for monogenic diseases. Dr. Thaxton holds a PhD in Biomolecular Sciences from the University of Central Florida and completed postdoctoral training at UNC-Chapel Hill. Education: PhD in Biomolecular Sciences, University of Central Florida (2007) BS in Molecular Biology and Microbiology, University of Central Florida (2002) Research Interests: Biocuration methodologies for genomic data Clinical validity assessment of gene-disease relationships Computational tools for variant annotation and evidence extraction Standardization of genetic terminology for precision medicine Advising & Grants: Supervises curation teams and expert panels within ClinGen Develops frameworks for collaborative genomic data interpretation Labs & Teams: Director of the UNC Biocuration and Coordination Core Collaborates with international research groups on genetic disease curation

Bradley M. Hemmingerمشاهده پروفایل

دانشیار

• Scholarly communications
• Medical and bio-informatics
• Computer-human interfaces
• +۶ مورد دیگر

Bradley M. Hemminger is an Associate Professor at the University of North Carolina at Chapel Hill's School of Information and Library Science (SILS), with a joint appointment in the Carolina Center for Genome Sciences and an adjunct role in Radiology. His expertise spans scholarly communications, medical/bio-informatics, digital libraries, and information visualization, including work in augmented/virtual reality and database systems. Education: BS, Vanderbilt University MS (Computer Science), University of North Carolina at Chapel Hill PhD (Computer Science), University of Utrecht Research Interests: Hemminger focuses on digital scholarship paradigms, information visualization, user interface design, and biomedical informatics. His work emphasizes improving scholarly communication systems, interactive information searching, and open access frameworks. He leads the Informatics and Visualization Lab and directs the Center for Research and Development of Digital Libraries, advancing technologies for academic research and publishing. Awards: 2005 ASIS&T Certificate of Appreciation 2005 ACR Distinguished Committee Service Award 2003 RSNA Certificate of Merit 2000 RSNA Honorable Mention Teaching & Labs: Teaches courses in information visualization, databases, and biomedical informatics. Directs the Informatics and Visualization Lab (part of the Interactive Information Systems Lab) and the Digital Libraries Center. His research explores new paradigms for digital scholarship and academic publishing in the modern era.

Stavroula Kanoniمشاهده پروفایل

دانشیار

• Nutrigenetics
• Cardiovascular Genetics
• Cardiometabolic Diseases
• +۵ مورد دیگر

Dr. Stavroula Kanoni is an Associate Professor (Reader) in Nutrigenetics and Cardiovascular Health at Queen Mary University of London's Faculty of Medicine and Dentistry, affiliated with the Clinical Pharmacology and Precision Medicine Centre. She holds additional roles as Deputy Academic Lead of the Environment and Health Multidisciplinary Theme, Fellow of the Digital Environment Research Institute (DERI), and Editorial Board member for Nutrigenetics/Nutrigenomics at the Nutrients Journal. Her expertise spans over a decade in cardiovascular genetics, nutrigenetics, and the interplay between genetics, diet, and lifestyle. Education: B.Sc. in Nutrition and Dietetics (Harokopio University, 2003); M.Sc. in Clinical Dietetics (2006); PhD in Nutrigenetics (2010). Research Focus: Genetic architecture of cardiometabolic diseases, polygenic risk scores, multi-ancestry cohorts, and precision medicine applications. Active in consortia like CARDIoGRAMPlusC4D, GLGC, and MAST4HEALTH. Her research integrates genomic, epigenomic, and metabolomic data to develop predictive models for cardiovascular health. Key projects include AI-driven polygenic risk profiling, genetic determinants of lipid levels, and nutraceutical interventions for NAFLD. She has published over 120 peer-reviewed articles, yielding an H-index of 66. Grants & Leadership: Leads the LEAP Collaborate to Innovate Fund project on cardiovascular risk AI tools and contributes to EU Horizon 2020 initiatives. She also drives educational innovation, designing new courses in environment and health at Queen Mary. Collaborations: Works with institutions like Oxford, Cambridge, Stanford, and international consortia to advance translational research in cardiovascular and metabolic diseases.

• Bioinformatics
• Genomics
• Genetics
• +۷ مورد دیگر

Paul Stothard is a Professor at the University of Alberta, affiliated with the Faculty of Agricultural, Life and Environmental Sciences and the Department of Agriculture, Food & Nutrition Science. He leads the Stothard Research Group, which focuses on bioinformatics-driven genomics and genetics research. His academic work integrates software development with applied animal genetics, contributing to breeding strategies for cattle and pigs, as well as environmental and microbial genomic projects. Dr. Stothard holds a PhD in molecular biology and genetics from the University of Alberta. His research interests include identifying genetic bases for animal traits, cataloging genome variations in livestock, developing diagnostic tools for pathogens in feedlot cattle, and creating user-friendly bioinformatics resources like Proksee and the CGView Comparison Tool. His group’s findings have been applied in DNA tests for cattle breeding and SNP chips for bison conservation. He is currently involved in the Bison Integrated Genomics (BIG) Project and the Resilient Dairy Genome Project, funded by Genome Canada and collaborating with institutions like the University of Guelph. His software contributions include Proksee (a bacterial genome analysis server) and CGView, widely used in microbial genomics research. Teaching includes courses such as AFNS 508 (Applied Bioinformatics) and AN SC 485 (Animal Genetics and Breeding). He advises students like Natalie Diether, who received the 2023 ALES Graduate Student PhD Thesis Award. His research also addresses antimicrobial resistance, feed efficiency in dairy cows, and the genetic underpinnings of livestock resilience to disease and environmental stress.

Thomas Barkerمشاهده پروفایل

استاد

• Risk Communication
• Public Health
• Community Engagement
• +۴ مورد دیگر

Thomas Barker, PhD is a Professor of Communication in the Graduate Program in Communication and Technology at the University of Alberta's Faculty of Arts , specifically within the English & Film Studies Department. He is also a Contributing Faculty member at the Peter Lougheed Leadership College. His research focuses on risk communication, public health, and community engagement, with notable projects including participatory action research in public health and pandemic risk communication models. He teaches courses like Risk Communication and Human Communication , emphasizing analytical tools for understanding communication contexts and public service. Professionally, he has held roles such as Director of Technical Communication at Texas Tech University and advisor to the Society for Technical Communication (STC). His work integrates transformative learning principles and global education frameworks. He has contributed to initiatives like the Wellness Leadership Series and Advanced Citation in Leadership programs. His research collaborations include CIHR-funded projects on public health communication strategies. Barker’s publications span technical documentation, communication theory, and interdisciplinary genomic studies. He emphasizes closing the loop in process development, advocating for iterative knowledge creation. While no formal awards are listed, his extensive advisory roles and academic contributions underscore his leadership in communication and technology fields. His teaching philosophy aligns with Alan Gross’s emphasis on analytical rigor for public good, blending pedagogical innovation with real-world applications. He advises no listed students but actively engages in program development and grants related to leadership and public health communication.

Astrid Collingroمشاهده پروفایل

پژوهشگر

• Microbial Ecology
• Bacterial Symbiosis
• Evolutionary Biology
• +۳ مورد دیگر

Profile Astrid Collingro is a Senior Scientist at the University of Vienna's Centre for Microbiology and Environmental Systems Science , within the Division of Microbial Ecology (DOME) . Her work focuses on the evolution and ecology of chlamydial symbionts, particularly their transition from protist symbionts to animal/human pathogens. She joined the university in 2003 and employs comparative 'omics, phylogenetic analysis, and cultivation techniques in her research. Research Interests Chlamydiae symbiosis and pathogenesis Microbial community dynamics in marine and terrestrial ecosystems Genomic adaptations of intracellular bacteria Evolutionary transitions from mutualism to parasitism Recent Research Trends Her recent work emphasizes coral-associated chlamydiae, fish pathogens, and environmental chlamydiae's ecological roles. Key findings include the role of gene gain in symbiont evolution and the coexistence of chlamydiae with other microbes like Endozoicomonas in corals. Grants & Projects Leads the 2020–2024 Towards functional ecology of environmental chlamydiae project (Research funding). Labs & Teams Part of the DOME research group, collaborating on microbial ecology and pathogen evolution studies.

Seth J Davisمشاهده پروفایل

استاد

• Plant Biology
• Circadian Rhythms
• Environmental Responses
• +۴ مورد دیگر

Professor Seth J. Davis holds the Chair of Plant Biology at the University of York's Department of Biology. His research focuses on plant circadian clocks, environmental responses in extremophilic microalgae (Galdieria), and their applications in crop improvement and biotechnology. He integrates systems biology approaches, including metabolite profiling, genomics, and quantitative genetics to unravel circadian mechanisms. His work bridges fundamental science with agricultural innovation, particularly in stress-resilient crop development. Teaching emphasizes skills-based learning, including student-led research projects, grant-writing exercises, and critical analysis of scientific literature. Courses cover genetic modification, plant model systems, and data analysis. He offers final-year projects on circadian rhythms, Galdieria biochemistry, and genomics. His research highlights include genomic studies of Galdieria's extremophile adaptations, circadian clock regulation in Arabidopsis and barley, and metabolic pathways influencing crop yield under adverse conditions. Collaborations focus on applying circadian insights to improve crop resilience through genetic variation analysis. Publications emphasize circadian clock dynamics, extremophile biology, and translational biotechnology. His lab explores telomere-to-telomere genome assembly techniques to address evolutionary questions in extremophiles. Grant activities and advising are central to his academic leadership, fostering interdisciplinary approaches to plant science challenges.

Kristian Flikkaمشاهده پروفایل

دانشیار

• Proteomics
• Bioinformatics
• Mass Spectrometry
• +۴ مورد دیگر

Kristian Flikka is an Associate Professor at the Department of Informatics, University of Bergen. His research focuses on computational methods in proteomics, bioinformatics, and mass spectrometry. He has expertise in developing tools for proteomic data analysis, including clustering algorithms, spectral quality filtering, and biomarker discovery. His work bridges computational techniques with life sciences, addressing challenges in data preprocessing, error reduction, and interpretability in AI models. Education: PhD in Computational Methods in High-Throughput Proteomics Research (2007) MSc in Methods for Analyzing 2D Electrophoretic Gel Images (2002) Research Interests: His research spans proteomics, computational biology, and AI applications in time series classification. Key areas include: Development of open-source tools for mass spectrometry data (e.g., ms_lims) Prediction of membrane protein structures (BOMP program) Pre-analytical proteomic data treatment Explainable AI for end-user model interpretation Publications: Over 15 publications since 2002, with notable contributions in BMC Bioinformatics , Proteomics , and Nucleic Acids Research . Recent work explores XAI in time series classification, reflecting expanded interests in AI interpretability. Awards & Grants: No specific awards listed, but his research has been supported by grants like the Norwegian Research Council (329745, 2022-2026). Labs/Teams: Collaborates with interdisciplinary teams at the University of Bergen, NORCE Norwegian Research Center, and international partners (e.g., Ghent University). Active in computational proteomics and AI-driven bioinformatics projects.

Ketil Maldeمشاهده پروفایل

دانشیار

• Bioinformatics
• Marine Genomics
• Machine Learning
• +۵ مورد دیگر

Ketil Malde is an Associate Professor at the Department of Informatics, University of Bergen. He is affiliated with the Norwegian Marine Data Center and the Institute of Marine Research. His research focuses on applying machine learning and bioinformatics to marine science challenges, including genome sequencing, acoustic data analysis, and fisheries management. Education: PhD in Algorithms for the Analysis of Expressed Sequence Tags (2005, University of Bergen). Research Interests: Bioinformatics, marine genomics, deep learning applications in fisheries science, acoustic signal processing, and automated data analysis for marine ecosystems. Scientific Contributions: Developed tools like DeepOtolith for fish age estimation, contributed to the salmon louse genome project, and pioneered methods for acoustic target classification using deep learning. His work bridges computational methods with ecological and fisheries management needs. Projects: CRIMAC (Center for Research-based Innovation in marine acoustic abundance estimation), COGMAR, and collaborations with Scantrol Deep Vision for eco-friendly fish sampling. Supervised students include Peter Løkhammer Liessem (object tracking for catch estimation) and Knut T. A. Holager (acoustic frequency subset selection). Active in organizing workshops like the Norway-U.S. Machine Learning in Marine Science collaboration.

Steven Zimmerlyمشاهده پروفایل

استاد

• RNA Biology
• Molecular Genetics
• Evolutionary Biology
• +۳ مورد دیگر

Steven Zimmerly is a Professor in the Department of Biological Sciences at the University of Calgary, Faculty of Science. His research focuses on group II introns' catalytic RNA properties, retroelement behavior, and evolutionary implications. He holds a B.A. in Chemistry from Goshen College (1986) and a Ph.D. in Biophysics from Yale University (1992). Research interests include the self-splicing mechanisms of group II introns, their mobility strategies, structural diversity, and evolutionary relationships. Notably, his work revealed how some introns insert after transcriptional terminators to avoid disrupting host genes. Zimmerly has contributed to databases tracking mobile group II introns and elucidated their roles in horizontal gene transfer and parasitic genomic dynamics. He has been recognized with the GREAT Supervisor Award (2018), AHFMR Senior Scholar (2003), and AHFMR Scholar (1998). Courses taught include BCEM 413 (Laboratory Techniques II) and CMMB 451 (Molecular Analysis of Biological Systems). Over 15 key publications span RNA structure-function studies, retroelement evolution, and bacterial genomic analyses. Grants & Funding: Not explicitly listed in the text. Labs/Teams: Research group focuses on RNA biology and molecular evolution; collaborates widely (e.g., with Lambowitz, Doulatov, and others).

Joy Littleمشاهده پروفایل

عضو هیئت علمی

• Molecular Biology
• Cancer Biology
• Genetics
• +۴ مورد دیگر

Joy Little is an Assistant Teaching Professor in the Department of Biological Sciences at NC State University, serving as Director of the Undergraduate Program in Biology (BA). She is affiliated with the College of Sciences and actively involved in the Genetics Genetics and Genomics Academy (GGA) and Molecular, Cellular and Developmental Biology initiatives. Her research focuses on molecular mechanisms underlying cancer progression, particularly in mammary tumorigenesis, genetic signaling pathways, and the role of NEDD9 in oncogenesis. She also explores connections between fatty acid synthesis pathways and endoplasmic reticulum stress in tumor cells. Her scholarly work spans bacteriophage genomics, including studies on Mycobacteriophages from clusters B1 and J, and she has contributed to understanding the interplay between metabolic pathways and cellular stress responses in cancer contexts. Her laboratory’s findings have implications for developing targeted anti-tumor therapies. Recent research highlights include: Genetic requirements for tumor initiation in mouse models Role of NEDD9 in luminal progenitor cells ER stress and unfolded protein response signaling Awards and grants: No specific honors are listed in the provided text. Her advising role focuses on undergraduate biology education, and she collaborates with interdisciplinary teams within the College of Sciences.

Jonathan Olsonمشاهده پروفایل

دانشیار

• Microbiology
• Bacterial Pathogenesis
• Antimicrobial Resistance
• +۳ مورد دیگر

Jonathan Olson is an Associate Professor and Director of the Undergraduate Program in Microbiology at NC State University, located in the Department of Biological Sciences within the College of Sciences. His research focuses on microbial physiology, pathogenesis, and stress response mechanisms in bacteria such as Campylobacter and Helicobacter species. He investigates topics including antimicrobial resistance dissemination, oxidative stress tolerance, and respiratory pathways critical for bacterial survival and host colonization. Key research areas include understanding how Campylobacter species adapt to environmental stressors like copper toxicity and oxidative damage, as well as analyzing genomic features influencing antibiotic resistance and horizontal gene transfer. His work bridges fundamental microbiology with applied studies on foodborne pathogens and industrial biotechnology applications, such as optimizing polyhydroxybutyrate production in Alcaligenes latus using agricultural byproducts. Dr. Olson collaborates with affiliated graduate programs in Microbiology (College of Agriculture and Life Sciences) and Molecular, Cellular and Developmental Biology. His research has led to significant contributions in bacterial genomics, including complete genome sequencing of Campylobacter strains, and has produced over 30 peer-reviewed publications since 2001. His articles frequently explore Campylobacter's genetic diversity, respiratory systems, and interactions with host organisms. He currently directs undergraduate microbiology education and oversees student advising through the BioSci Student Services office in Bostian Hall. His laboratory facilities are housed in Thomas Hall, where he mentors students through experimental projects on bacterial genetics and physiology.

Eric Lyonsمشاهده پروفایل

دانشیار

• Plant Genomics
• Agricultural Biotechnology
• Computational Biology
• +۴ مورد دیگر

Eric Lyons is an Associate Professor in the School of Plant Sciences and Biosystems Engineering at the University of Arizona's College of Agriculture and Life Sciences. He is also an Affiliate Faculty member in the College of Information Science and part of the BIO5 Institute. His research focuses on plant genomics, bioinformatics tools, and agricultural cyberinfrastructure. Key projects include developing platforms like CyVerse and PhytoOracle for genomic and phenomic data analysis, as well as advancing understanding of mRNA modifications and plant responses to environmental stresses. Lyons contributes to interdisciplinary initiatives such as the Agricultural Genome to Phenome Initiative (AG2PI), bridging computational and biological sciences. Research interests span plant molecular biology, computational genomics, and open-science infrastructure. He has pioneered tools for genomic data management (e.g., CoGe) and phenomic analysis, enabling collaborative research in agriculture and plant biology. His work integrates machine learning for plant imaging and addresses challenges in translating genomic data into actionable insights for crop improvement. No notable scientific awards are listed. His contributions to grants and advising are not detailed in available texts. He collaborates with the BIO5 Institute and the College of Information Science on interdisciplinary projects, emphasizing data-driven solutions in agriculture and biology.

• Neuroscience
• Systems Biology
• Computational Biology
• +۴ مورد دیگر

Stig William Omholt is a Research Professor and Research Director at the Kavli Institute for Systems Neuroscience at NTNU. His work bridges systems biology, neuroscience, and computational modeling. Key research interests include Alzheimer’s disease mechanisms, population dynamics modeling, and cardiovascular physiology. He has contributed to major initiatives like the Functional Annotation of All Salmonid Genomes (FAASG) and pandemic response strategies during the COVID-19 crisis. Publications span topics such as amyloid beta-reelin interactions in Alzheimer’s, household-targeted vaccination strategies, and mitochondrial genetics. His interdisciplinary approach integrates mathematical modeling with experimental data to address complex biological systems. Recent work emphasizes translational applications in personalized medicine and ecological conservation. Key Contributions: Alzheimer’s pathology modeling, wildlife population dynamics, and pandemic intervention strategies Collaborations: International teams in genomics, cardiology, and epidemiology Expertise: Systems-level analysis of physiological and ecological systems

Carol Loopstraمشاهده پروفایل

دانشیار

• Forest Genetics
• Genomics
• Molecular Biology
• +۳ مورد دیگر

Carol Loopstra is an Associate Professor in the Department of Ecology and Conservation Biology at Texas A&M University, part of the College of Agriculture & Life Sciences. She specializes in loblolly pine genomics and molecular biology, with a focus on drought stress responses and tools for tree breeders. Her work explores gene expression variation and its impact on adaptation. Loopstra has secured over $47 million in grants, with $2.49 million directly attributed to her research. She teaches courses like Forest Trees of North America and has advised 17 graduate students (7 PhD, 10 master’s). She serves as Section Editor-in-Chief for the journal Forests ’ Genetics and Molecular Biology section. Education: B.S. in Forest Management (Oregon State University), M.S. in Forest Science (Oregon State University), Ph.D. in Genetics and Forestry (North Carolina State University). Research interests include understanding genetic bases of adaptive traits, genomic selection in conifers, and molecular mechanisms of stress tolerance. Her lab contributes to projects like PINEMAP+, aiming to improve future forests through genomic tools. Recent publications highlight advancements in loblolly pine genomics, drought responses, and exome-wide association studies. Grants and advising reflect a commitment to applied genetics and education. She is active in Texas A&M AgriLife Research, integrating academic and practical forestry solutions.