جست‌وجوی استاد و پژوهشگر

Karoline Faustمشاهده پروفایل

دانشیار

• Microbial community dynamics
• Microbial systems biology
• Bioinformatics
• +۶ مورد دیگر

Karoline Faust is an Associate Professor at KU Leuven, affiliated with the Laboratory of Molecular Bacteriology (Rega Institute) and the Faculty of Medicine . She contributes to the iSi Health and Leuven One Health institutes, and serves on senior academic councils. Her research spans microbial systems biology, focusing on community dynamics and network analysis. Education: PhD in bioinformatics (2010, KU Leuven) Affiliations: KU Leuven, ISME Journal editorial board, Belgian Society for Microbiology Her research investigates microbial community dynamics , systems biology approaches to microbiomes, and bioinformatics tool development . She specializes in modeling human gut microbiota , synthetic microbial communities , and environmental microbiomes (e.g., microplastic impacts on Daphnia microbiomes). Her work integrates metabolic modeling , network analysis , and experimental systems to understand microbial interactions. Recent publications highlight her contributions to microbial network inference , 16S rRNA sequencing protocols , microfluidics , and ecological modeling of microbiomes. She develops tools like manta , miaSim , and CoNet to analyze community structures. Teaching: Karoline co-teaches courses in microbiology, bioinformatics, and network analysis at KU Leuven, and has contributed to international workshops on microbial network inference. Scientific Engagement: She serves as Senior Editor at ISME Journal and Secretary of the Belgian Society for Microbiology .

• Veterinary Epidemiology
• Antimicrobial Resistance
• One Health
• +۳ مورد دیگر

Professor Ruth Zadoks is a faculty member at the Sydney School of Veterinary Science, University of Sydney. She holds academic positions in the Sydney Institute of Agriculture and Sydney Southeast Asia Centre, and is involved with the Sydney Infectious Diseases Institute. Her research focuses on antimicrobial resistance, zoonotic diseases, bovine health, and One Health principles. Notable projects include investigations into Japanese encephalitis transmission dynamics, antibiotic use in East African livestock, and molecular epidemiology of Group B Streptococcus. Recent grants include studies on microbial spillover in aquaculture and precision feeding in broiler chickens. Her work integrates veterinary and public health perspectives, addressing issues like anthrax impacts in rural Africa, tilapia-borne zoonoses, and diagnostic innovations for bovine mastitis. Over 118 peer-reviewed publications highlight her contributions to aquatic pathogen genomics, food safety, and livestock disease ecology. Recent grants (2024): - Revealing microbial spillover drivers in aquaculture (SSEAC Incubator) - Sustainable Precision Feeding in Broiler Chickens (AgriFutures) - ASEAN Antimicrobial Resistance Network (DFAT-funded) Labs/Teams: Affiliated with Sydney Infectious Diseases Institute and collaborates across interdisciplinary One Health networks.

Mark Smeltzerمشاهده پروفایل

استاد

• Bacterial Pathogenesis
• Antimicrobial Resistance
• Infectious Disease
• +۴ مورد دیگر

Mark Smeltzer is a Professor in the Department of Microbiology and Immunology and Department of Orthopaedics at the University of Arkansas for Medical Sciences (UAMS). He specializes in the molecular pathogenesis of Staphylococcus aureus infections, particularly focusing on its role in orthopaedic infections, biofilm formation, and antibiotic resistance mechanisms. His work integrates molecular biology, proteomics, and nanotechnology to develop novel therapeutic strategies. Dr. Smeltzer earned his Ph.D. from Kansas State University and completed postdoctoral training under Dr. John J. Iandolo. His research is supported by grants from the National Institute of Allergy and Infectious Diseases (NIAID), the Congressionally-Directed Medical Research Program, and the Texas Hip and Knee Foundation. Key collaborations include projects with Dr. Jingyi Chen (nanotherapeutics) and Dr. Alexandru Biris (bone regeneration scaffolds). Research Interests: Mechanisms of S. aureus biofilm formation and antibiotic resistance Role of the sarA regulatory gene in virulence and infection Development of nanoparticle-based therapies for biofilm-associated infections Orthopaedic device-related infections and bone regeneration Key Findings: Identified sarA mutations limiting biofilm formation and enhancing antibiotic susceptibility Developed gold nanocage-based systems for targeted antibiotic delivery and photothermal therapy Discovered protease-dependent virulence factors critical for infection progression Funding Highlights: NIAID grants for sarA regulatory pathway studies Congressionally-Directed Medical Research Program grants for small molecule inhibitors Collaborative grants for nanotherapeutic and bone regeneration projects Dr. Smeltzer’s lab actively explores translational approaches to combat antibiotic-resistant infections, with a focus on clinical applications in orthopaedics and infectious diseases.

Irene Nobeliمشاهده پروفایل

مدرس ارشد

• Bioinformatics
• Transcriptomics
• Regulatory RNAs
• +۳ مورد دیگر

Dr. Irene Nobeli is a Senior Lecturer and Education Lead (PG taught courses) at the School of Natural Sciences, Birkbeck, University of London. She specializes in computational biology and chemoinformatics, focusing on regulatory RNAs, transcriptomics in health/disease, brain disorders, and small molecule roles in biology. Her work bridges bioinformatics tools development and translational research. Administrative roles include directing the MSc Bioinformatics program and organizing the Sequence Analysis and Omics module. She collaborates with research centers like the Birkbeck Institute for Data Analytics (BIDA) and the Institute of Structural Molecular Biology (ISMB). Research interests span bioinformatics methodologies, Mycobacterium genomics, neurodevelopmental disorders, and computational drug design. Notable contributions include developing flexiMAP (alternative polyadenylation analysis) and baerhunter (bacterial non-coding RNA detection). Publications highlight her expertise in transcriptomics, bacterial pathogenesis, and neurobiological mechanisms. She actively engages in advancing computational methods for genomic data interpretation and translational medicine.

• Veterinary Medicine
• Dairy Cattle Health
• Reproductive Health
• +۴ مورد دیگر

Prof. Jocelyn Dubuc is a Full Professor at the Faculty of Veterinary Medicine (Université de Montréal), specializing in bovine population health and reproductive medicine. He leads the Department of Clinical Sciences , focusing on dairy cow uterine health, metabolic diseases, and epidemiology. His work bridges clinical practice and research, emphasizing evidence-based management strategies. Education: 2005: DVM, Université de Montréal 2007: MSc in Veterinary Sciences, Université de Montréal 2010: PhD in Veterinary Science, University of Guelph Research Focus: Uterine infections and postpartum disorders Metabolic diseases (e.g., ketosis) Antimicrobial stewardship On-farm diagnostic tools Reproductive tract disease epidemiology His studies have redefined understanding of postpartum endometritis and shaped clinical guidelines for dairy herd management. Awards: 2013: Prix Carl J. Norden for Teaching Excellence 2015: Journal of Dairy Science Loyalty Program Grants & Collaborations: Leading projects funded by MAPAQ, FRQNT, and industry partnerships. Key member of RQR (Reproduction Network) and Op+lait (Dairy Quality Optimization). Developed courses on uterine health monitoring and metabolic diagnostics. Teams: Collaborates with over 100 researchers in networks like Vetmétabo (AI-driven veterinary medicine) and the Québec Dairy Health Benchmarking Initiative.

• Phytopathology
• Virology
• Plant Pathology
• +۳ مورد دیگر

Ayşe ÇANDAR serves as a Lecturer in the Department of Plant Protection, Faculty of Agriculture at Ahi Evran University, Turkey. She holds a PhD in Phytopathology from Ege University, which she completed in 2020. Her academic career includes multiple teaching and research positions at Kırşehir Ahi Evran University, where she currently teaches undergraduate courses in Plant Protection, Plant Bacteriology, Plant Virus and Viroid Diseases, and General Microbiology. Dr. ÇANDAR earned her BSc (2011), MSc (2014), and PhD (2020) in Plant Protection from Ege University, with her doctoral research focusing on race determination and characterization of Potato Virus Y (PVY) in Solanaceae family crops. Her foreign language proficiency includes English (YÖKDİL 58, 2021; ÜDS 65, 2011). Her research specializes in phytopathology and virology, particularly examining viral and viroid diseases in agricultural crops. She investigates molecular detection methods, seed-borne pathogens, and disease management strategies. Recent work explores the application of chitosan in mitigating salt stress effects on seed germination and the impact of artificial lighting on plant diseases. Her research connects plant pathology with sustainable agricultural practices, focusing on biocontrol methods and greenhouse cultivation systems. Analysis of her publication trends shows increasing scholarly output since 2020, with a concentration on practical applications of plant pathology research. Her work spans molecular diagnostics of plant pathogens, seed pathology, greenhouse disease management, and sustainable agricultural approaches. She frequently collaborates with researchers from Ege University and other Turkish institutions, demonstrating strong interdisciplinary connections within the agricultural sciences community. Dr. ÇANDAR actively contributes to academic service through editorial roles for journals including Turkish Journal of Agriculture-Food Science and Technology, Journal of Plant Diseases and Protection, and several university publications. She serves on quality assurance committees at Ahi Evran University, including as a Quality Coordinator for the Geothermal Advanced Greenhouse Technologies and Production Techniques Application and Research Center. She has participated in numerous research projects, including studies on virus diseases in vegetables grown in Kırşehir, development of tomato rootstock lines resistant to soil-borne diseases using MAS techniques, and the Geothermal Cluster Project in Greenhouses. Her laboratory work focuses on molecular diagnostics of plant pathogens, particularly viroids and viruses affecting grapevines, potatoes, and vegetable crops.

Rui Liuمشاهده پروفایل

استادیار

• Aging and Geriatrics
• Neurodegenerative Disease
• Environmental Exposures
• +۷ مورد دیگر

Rui Liu, Ph.D., MPH, serves as Assistant Professor of Health Science in the College of Health Professions at Sacred Heart University. Her expertise spans aging research, neurodegenerative disease, and environmental health impacts, with significant contributions to understanding cognitive decline and chronic disease mechanisms in aging populations. She teaches core courses including Research Methods and Health Research Capstone while leading active investigations into sleep, inflammation, and dementia risk. Her educational foundation includes: Ph.D. in Epidemiology, University of South Carolina MPH in Public Health, Southern Connecticut State University BS in Bacteriology, University of Wisconsin-Madison Dr. Liu's research program integrates geriatric health, neuroimaging, and environmental exposures to address critical gaps in aging science. Primary focus areas include: Neurodegenerative disease progression in diverse populations Impact of air pollution and nutrition on cognitive function Health disparities among Asian American older adults Mechanistic links between telomere biology and coronary disease Her mixed-methods approach combines large-scale biobank analyses with community-based investigations to develop targeted interventions for at-risk elders. Recent publications (2023-2025) reveal consistent emphasis on environmental determinants of cognitive aging and health equity . Key trends include leveraging UK Biobank data to examine telomere dynamics, analyzing racial disparities in cognitive outcomes, and exploring early-life influences on late-life dementia risk. Her work bridges epidemiology, environmental health, and gerontology to address modifiable risk factors in aging populations. Major recognitions include: College of Health Professions Excellence in Teaching Award (2022) Sacred Heart University Research and Creativity Grant (2022) NIEHS Intramural Epidemiology Research Award (2017) NIH Fellows Award for Research Excellence (2016) These reflect her dual excellence in pedagogy and innovative aging research. Dr. Liu mentors students through capstone projects and research internships while leading the active study The Effects of Sleep and Inflammation on Cognition and Dementia Risk (funded by Sacred Heart University since 2022). Her grant portfolio demonstrates sustained focus on translating epidemiological findings into preventive strategies for cognitive decline, with particular attention to vulnerable aging subpopulations. Though specific laboratory facilities aren't detailed, her UK Biobank collaborations and community-focused environmental justice work indicate strong interdisciplinary partnerships across public health, social work, and clinical neuroscience domains.

Federico Reyمشاهده پروفایل

استاد

• Microbiome
• Microbe-diet interactions
• Cardiovascular disease
• +۴ مورد دیگر

Federico Rey is a Professor in the Department of Bacteriology and Medical Microbiology & Immunology at the University of Wisconsin–Madison. His research focuses on the interplay between gut microbiota, diet, and host health, particularly in cardiometabolic and neurodegenerative diseases. Education: Licenciado en Bioquímica (University of Córdoba, Argentina, 1998), Ph.D. in Microbiology (University of Iowa, 2006), Postdoctoral Research at Washington University’s Center for Genome Sciences and Systems Biology. Rey’s work investigates how microbial metabolism of nutrients like choline and flavonoids influences diseases such as atherosclerosis and Alzheimer’s. His lab employs gnotobiotic mouse models, sequencing analyses, and collaborations to dissect mechanisms linking TMAO production, epigenetic changes, and vascular health. Recent studies explore dietary interventions (e.g., quercetin, tripropionin) and host genetic factors affecting microbiome composition. The lab also examines microbial contributions to metabolic syndrome, post-infarction cardiac repair, and bile acid transformations. Notable trends in his publications include the role of bacterial pathways in cardiometabolic disease, microbiome interactions with dietary components, and microbial strain specificity in therapeutic engraftment. Collaborations span neurology, immunology, and systems genetics, addressing questions from social determinants to genetic mapping of host-microbe traits.

Katy JEANNOTمشاهده پروفایل

استاد بالینی

• Bacteriology
• Molecular Biology
• Antibiotic Resistance
• +۷ مورد دیگر

Katy JEANNOT is a Clinical Professor affiliated with the University of Bourgogne Franche-Comté and the CHU Besançon Hospital. Her research focuses on antibiotic resistance mechanisms in Pseudomonas aeruginosa and Acinetobacter baumannii, including efflux pumps, genetic determinants of resistance, and adaptations to antimicrobial peptides. She investigates clinical isolates from cystic fibrosis patients, analyzing their phenotypic and genotypic evolution. Her work spans epidemiological studies of antibiotic resistance, such as the 2023–24 Mycoplasma pneumoniae outbreak in France, and evaluates new antimicrobial agents like cefiderocol and murepavadin. She collaborates on projects involving rapid diagnostic tests for carbapenemases and genomic studies of high-risk bacterial clones. Key research areas include multidrug resistance mechanisms, envelope stress responses, and the development of novel antimicrobial strategies. She has contributed to clinical trials assessing compassionate use of antibiotics and has authored/co-authored over 80 peer-reviewed articles, emphasizing global antibiotic resistance surveillance and molecular epidemiology. Affiliations: CHU Besançon, UMR 6249 Chrono-Environnement, University of Bourgogne Franche-Comté Labs/Teams: Involved in multidisciplinary teams studying microbial pathogenesis and antimicrobial resistance.

• Immunology
• Molecular Immunology
• Infectious Diseases
• +۷ مورد دیگر

Jan Petersen is a Research Fellow in the Department of Biochemistry and Molecular Biology at Monash University, within the Faculty of Medicine, Nursing and Health Sciences. His research is centered on molecular and cellular immunology, particularly focusing on T-cell responses to viral and bacterial pathogens. His research interests span Immunology , Infectious Diseases , T-cell Immunity , Immunopeptidomics , HLA Biology , and Viral Epitopes . His work explores how the immune system recognizes conserved epitopes in pathogens such as influenza B virus and SARS-CoV-2, as well as bacterial toxins like cholesterol-dependent cytolysins. The recent publications highlight a strong trend in understanding immune responses across diverse populations, including First Nations peoples, and the role of genetic polymorphisms in immune receptors like KIR3DL3. His research combines structural biology, immunogenetics, and clinical immunology to uncover mechanisms of broad-spectrum immunity. Jan Petersen has no listed scientific awards in the provided text. He collaborates extensively with leading immunologists including James Rossjohn, Anthony W. Purcell, and Katherine Kedzierska. While no direct mention of student supervision or grants is made, his active publication record in top-tier journals suggests involvement in major research initiatives and team-based science. He is part of a dynamic research network at Monash University focused on infectious disease immunity, antigen presentation, and immune modulation in both viral and bacterial contexts.

Ivo Gomperts Bonecaمشاهده پروفایل

پژوهشگر

• Bacteriology
• Microbiology and Infection
• Cell biology and development
• +۹ مورد دیگر

Ivo Gomperts Boneca is a permanent researcher and head of the Laboratory of Biology and Genetics of the Bacterial Cell Wall at the Institut Pasteur, Paris, within the Department of Microbiology. His research focuses on peptidoglycan (PGN) metabolism in bacterial pathogens such as Helicobacter pylori , Neisseria meningitidis , and Leptospira interrogans , examining both bacterial physiology and host immune responses. He leads major funded projects including ERC-2024-SyG-AI4AMR, which integrates artificial intelligence into antibiotic discovery, and participates in the INCEPTION convergence institute for interdisciplinary research. Institut Pasteur, Paris, France Department of Microbiology Laboratory of Biology and Genetics of the Bacterial Cell Wall Principal Investigator, ERC grants Member, INCEPTION program His research interests center on understanding how the bacterial cell wall is assembled and remodeled during growth and division, and how PGN fragments influence host innate immunity. He investigates how pathogens modulate PGN to evade immune detection and how commensal bacteria contribute to gut homeostasis and disease prevention. His work bridges microbiology, immunology, and systems biology, with implications for antibiotic development and inflammatory disease treatment. The recent publications reflect a strong trend in microbial cell wall biology, host-pathogen interactions, and the gut-immune-brain axis. Themes include PGN dynamics in host tissues, bacterial shape modulation, immune sensing mechanisms, and the role of microbiota in inflammation and cancer immunotherapy. The integration of AI in antimicrobial discovery highlights a forward-looking approach to combating antibiotic resistance. ERC-2007-Stg-202283-PGNfromSHAPEtoVIR ERC-2024-SyG-AI4AMR INCEPTION convergence program Dr. Boneca mentors numerous PhD students and postdoctoral researchers, fostering a dynamic research environment. His lab receives substantial funding from the European Research Council and participates in collaborative, interdisciplinary grants. He leads projects on PGN assembly inhibition, gut microbiota effects on immunity and cancer therapy, and the development of optogenetic tools. His team includes research engineers, technicians, and administrative staff, reflecting a well-supported research structure. He is affiliated with core research platforms at the Institut Pasteur, including those in bioimaging and microbiology. His laboratory is embedded within a network of interdisciplinary teams working on infectious diseases, immunity, and microbial evolution. The integration of computational and experimental approaches is evident in his participation in AI-driven drug discovery initiatives.

Natalie K. Gotoمشاهده پروفایل

دانشیار

• Protein Structure
• Protein Dynamics
• Solution NMR Spectroscopy
• +۵ مورد دیگر

Natalie K. Goto is an Associate Professor in the Department of Chemistry and Biomolecular Sciences at the University of Ottawa. She leads a research laboratory focused on protein science using solution NMR spectroscopy. Her educational background includes a B.Sc. in Biochemistry from the University of Toronto (1993), a Ph.D. from the University of Toronto (2001), and postdoctoral training at The Scripps Research Institute (2002). Her research investigates protein structure-function relationships in two primary areas: (1) Bacterial cell division mechanisms, particularly the MinCDE system in Neisseria gonorrhoeae that regulates symmetric cell division through membrane-associated oscillation; and (2) Membrane protein structural biology, with emphasis on rhomboid proteases like GlpG and their function in lipid bilayers. Her lab employs NMR spectroscopy to analyze protein dynamics and conformational changes. Professor Goto has received notable scientific recognition including the Ontario Early Researcher Award (2008), John Charles Polanyi Prize in Chemistry (2004), and Research Corporation Innovation Award (2003). She currently advises graduate students including Adam Cloutier (MSc) and Anwar Hassan (MSc), and is actively recruiting additional graduate students and postdoctoral researchers to her laboratory.

Alan R Hauserمشاهده پروفایل

استاد

• Infectious Diseases
• Microbiology
• Bacterial Pathogenesis
• +۳ مورد دیگر

Dr. Alan R Hauser is a Professor in the Department of Microbiology-Immunology and Medicine (Infectious Diseases) at Northwestern University Feinberg School of Medicine. He serves as Vice Chair of Microbiology-Immunology and Director of Feinberg’s Medical Scientist Training Program (MSTP). BA, St. John's University (1982) MS, PhD, MD, University of Minnesota (1985, 1990, 1992) Postgraduate Training: University of Minnesota Medical Center (1993-1994), UCSF (1996, 1999) His research focuses on the pathogenesis of multidrug-resistant gram-negative bacteria, including Pseudomonas aeruginosa , Acinetobacter baumannii , and Klebsiella pneumoniae . Key areas include virulence factors like type III secretion systems, genomic approaches to identify novel virulence determinants, and translational strategies to combat bacterial infections. His lab utilizes molecular/cellular assays, animal models, and epidemiological studies. Recent publications highlight advancements in pharmacokinetic/pharmacodynamic modeling for ICU antibiotic therapies, genomic insights into bacterial colonization mechanisms, and novel methodologies for virulence quantification using Galleria mellonella . These works span disciplines including Infectious Diseases, Genomics, and Clinical Pharmacology. Scientific Awards: Tripartite Legacy Faculty Prize in Translational Science and Education (2024) Faculty Mentor of the Year Award (2024) Multiple Teaching Pin Awards (2016-2021) Fellow, American Academy of Microbiology (2016) Dr. Hauser actively contributes to editorial boards (e.g., Infection and Immunity ), scientific advisory roles (Microbiotix, Inc.), and professional societies (Infectious Diseases Society of America, American Society for Microbiology). His lab collaborates with institutes like the Center for Genetic Medicine and NUCATS.

• Molecular Biology
• Bacteriology
• Phage Therapy
• +۲ مورد دیگر

Ed Galyov is a Reader (equivalent to Associate Professor) in the Department of Genetics and Genome Biology at the University of Leicester. His research centers on bacterial pathogenesis, phage therapy, and the molecular mechanisms of host-pathogen interactions, particularly involving Salmonella and Burkholderia species. Galyov develops phage-based diagnostics and therapeutics to combat antimicrobial resistance. His work includes optimizing bacteriophage cocktails for clinical applications and modeling pathogen dynamics in changing environments.

Mathieu Picardeauمشاهده پروفایل

استاد

• Bacteriology
• Leptospirosis
• Genomics
• +۷ مورد دیگر

Mathieu Picardeau is Head of the Biology of Spirochetes Unit at the Institut Pasteur in Paris, France. The unit serves as the French National Reference Center (NRC) for Leptospirosis and a WHO Collaborating Center for Research and Reference on Leptospirosis. He leads research on the genomics, epidemiology, and diagnostics of Leptospira , a significant zoonotic pathogen affecting tropical and underserved populations globally. His research focuses on: Whole-genome sequencing and cgMLST genotyping of Leptospira strains Development of improved diagnostic tools, including ELISA and point-of-care tests Characterization of Leptospira biodiversity and discovery of novel species Epidemiological surveillance in France and overseas territories Application of targeted genome capture to overcome cultivation challenges His recent publications reveal strong trends in molecular epidemiology, diagnostic validation, and global pathogen surveillance. He contributes to international taxonomic efforts and One Health approaches, with studies spanning human, animal, and environmental health across multiple continents. His work is central to improving healthcare outcomes for neglected tropical diseases. Scientific contributions and recognitions include: Leadership of the French NRC and WHO Collaborating Center for Leptospirosis Development of the publicly accessible cgMLST database at https://bigsdb.pasteur.fr/leptospira/ Principal investigator on multiple national and international research projects Active participation in the International Committee on Systematics of Prokaryotes As a principal investigator, Dr. Picardeau mentors junior scientists and collaborates extensively with teams in endemic regions such as Laos, Costa Rica, Algeria, and French Guiana. His research is supported by institutional funding and international collaborations. The Biology of Spirochetes Unit maintains a large, curated collection of Leptospira strains and plays a key role in public health response and outbreak investigation. Future work is expected to focus on real-time genomic surveillance, vaccine development, and expanding diagnostic accessibility in low-resource settings.