Joseph A. November is an Associate Professor in the Department of History at the University of South Carolina, affiliated with the McCausland College of Arts and Sciences. His research focuses on the history of biomedical computing, distributed computing, and the intersection of technology and medicine. He holds a Ph.D. from Princeton University (2006), an M.A. from the University of Chicago (2002), and a B.A. from Hamilton College (1997). His work includes the award-winning book Biomedical Computing: Digitizing Life in the United States (2012), which explores the co-development of biomedicine and computing technologies. Current projects include Revolutions@home , examining distributed computing in protein folding research, and a biography of computing pioneer Robert S. Ledley. He has received grants from the NSF, NIH, and the Charles Babbage Institute. Teaching interests span the history of science and technology, including courses on the history of medicine, digital humanities, and the role of games in historical education. He actively contributes to professional organizations like SHOT and the History of Science Society. Awards include the Computer History Museum Prize (2013) and the National Institutes of Health DeWitt Stetten Fellowship (2007-2008). His research bridges historical analysis with contemporary issues in technology and biomedical ethics.
Tommi Jaakkola is the Thomas Siebel Professor of Electrical Engineering and Computer Science and the Institute for Data, Systems, and Society at the Massachusetts Institute of Technology. He received his MSc in theoretical physics from Helsinki University of Technology in 1992 and his PhD from MIT in computational neuroscience in 1997. After completing a postdoctoral position in computational molecular biology as a DOE/Sloan fellow at UCSC, he joined the MIT EECS faculty in 1998. His research advances how machines can learn, predict or control, and do so at scale in an efficient, principled, and interpretable manner. His work in machine learning extends from foundational theory to modern applications, focusing especially on statistical inference and estimation tasks that lie at the heart of complex learning problems. He designs new methods, theory and algorithms to automate the use and generation of semi-structured data such as natural language text, images, molecules, or strategies. Jaakkola applies and develops algorithms to solve multi-faceted recommender, retrieval, or inferential tasks (particularly in biomedical contexts), design and optimize molecules or reactions for drug design, and model strategic, game theoretic interactions. His recent work heavily focuses on diffusion models, protein structure prediction, molecular design, and generative AI, with significant publications in top conferences including ICML, NeurIPS, and ICLR. His scientific contributions span multiple disciplines with significant impact in both theoretical machine learning and practical applications in computational biology and chemistry, including notable work on antibiotic discovery published in Cell. Current advisees: Julia Balla, Bowen Jing, Hannes Stärk, Peter Holderrieth, Chenyu Wang Recent graduates: Gabriele Corso (Boltz PBC), Ezra Erives (DE Shaw), Jason Yim (Xaira) Jaakkola maintains an active research program through MIT's Computer Science and Artificial Intelligence Laboratory (CSAIL) and the Institute for Data, Systems, and Society (IDSS), with his office located in the Stata Center (32-G470). His work bridges theoretical machine learning with practical applications, making significant contributions to both the academic field and potential real-world impact in healthcare and drug discovery.
Professor Thomas Bein is affiliated with the Department of Chemistry at Ludwig-Maximilians-Universität München (LMU) , where he leads the Functional Nanosystems research group. His work focuses on synthesizing and characterizing nanostructured materials with applications in energy, catalysis, and biomedical delivery. Mesoporous nanoparticles for drug delivery Semiconductor nano-morphologies for photovoltaics Photoelectrochemical water splitting Metal-organic frameworks (MOFs) Electroactive networks His research emphasizes atomic-scale control of material architectures using self-assembly, hydrogen bonding, and covalent interactions, enabling precise tuning of electronic, optical, and catalytic properties. A review of his recent publications reveals cutting-edge investigations into covalent organic frameworks (COFs), perovskite-inspired solar materials, and functional nanoparticle systems. Key trends include optimizing energy conversion efficiency, enhancing stability in optoelectronic devices, and exploring bio-compatible nanocarriers for targeted therapies. Professor Bein’s group actively contributes to interdisciplinary projects at the intersection of chemistry, physics, and biomedical engineering, with ongoing collaborations in solar energy, sustainable materials, and nanomedicine.
Harris H. Wang is an Associate Professor in the Department of Systems Biology and Department of Pathology and Cell Biology at Columbia University's Vagelos College of Physicians and Surgeons, where he also serves as Interim Chair of Systems Biology. He is affiliated with the Center for Computational Biology and Bioinformatics (C2B2) and the Integrated Program in Cellular, Molecular and Biomedical Studies (CMBS). B.S., Physics and Mathematics, MIT Ph.D., Biophysics, Harvard University Dr. Wang's research lies at the intersection of systems and synthetic biology, focusing on developing foundational technologies for genome engineering, microbiome manipulation, and synthetic genomics. His lab pioneers methods such as MAGE, MAGIC, CAST, and CAMII to enable high-throughput genetic manipulation, in situ microbiome engineering, and AI-driven microbial culturomics. Key research themes include understanding microbial community dynamics, engineering cellular memory systems, designing biocontained genetic circuits, and applying synthetic biology to human health challenges in personalized medicine and infectious disease. His recent publications reveal a strong trend in spatial and functional metagenomics, CRISPR-based microbiome editing, and synthetic biology tools for data storage and genetic stability. The articles span high-impact journals like Nature , Science , and Nature Biotechnology , reflecting his leadership in developing scalable, programmable biological systems. Scientific Awards: NIH Director’s Early Independence Award Forbes 30 Under 30 in Science Sloan Research Fellowship NSF CAREER Award ONR Young Investigator Award Burroughs Wellcome Fund PATH Award Schaefer Scholar Blavatnik National Award Vilcek Prize PECASE Dr. Wang has advised numerous PhD and postdoctoral researchers, many of whom have gone on to independent scientific careers. His lab is supported by major grants from NIH, NSF, DARPA, DOE, and foundations including the Bill & Melinda Gates Foundation and CZ Biohub NY. He is actively involved in educational initiatives, including organizing Columbia’s iGEM team and the Cold Spring Harbor Laboratory Synthetic Biology course. The Wang Lab is based at the Columbia University Irving Medical Center and is part of national consortia such as the Engineering Biology Research Consortium (EBRC) and the Genome Project-Write (GP-Write) initiative. The lab develops and applies cutting-edge technologies in automation, machine learning, and synthetic biology to engineer microbiomes for applications in medicine, global health, and climate change.
Romain Lopez is an Assistant Professor of Computer Science and Biology at New York University, with a joint appointment in the Courant Institute of Mathematical Sciences and the Department of Biology. He will be joining NYU in September 2025, bringing expertise at the intersection of machine learning and computational biology. Prior to joining NYU, he was a Postdoctoral Fellow at Genentech and Stanford Medicine from 2021 to 2025, working with Jonathan Pritchard and Aviv Regev. Dr. Lopez received his educational training at prestigious institutions: PhD in Computer Science (2021) from the University of California, Berkeley, advised by Mike Jordan and Nir Yosef M.S. in Applied Mathematics (2016) from École polytechnique, Palaiseau, France Dr. Lopez's research focuses on developing machine learning methods to understand biological systems at the cellular level. His work bridges computational techniques with biological applications, particularly in single-cell and spatial omics analysis. He pioneered probabilistic approaches for single-cell analysis with scVI and co-developed scvi-tools, now widely adopted tools in the field. His research spans deep generative models, causal inference, perturbation modeling, and representation learning for biological data. His publication record demonstrates a consistent trajectory of innovation in computational biology, with recent work focusing on spatial biology, disentangled representations of cellular perturbations, and causal modeling of cellular responses. He has made significant contributions to the field of single-cell analysis, developing methods that help scientists interpret complex cellular data and predict how cells respond to various perturbations. Dr. Lopez has received numerous honors and awards for his research: Best Paper Award from the ICML Workshop on AI for Science (2024) Best Paper Award Honorable Mention from the AAAI Conference on Artificial Intelligence (2021) Best Student Poster Award from the ICML Workshop on Computational Biology (2019) UC Berkeley EECS Departmental Graduate Fellowship (2016) Carnot Foundation Fellowship (2016) Monahan Foundation Fellowship (2016) French National Defence Medal, Bronze Echelon (2014) At NYU, Dr. Lopez will lead the Biological Machine Learning group, which develops probabilistic machine learning methods to uncover biological mechanisms governing cellular behavior and disease. His lab focuses on creating tools that transform complex cellular data into biological insights, with applications in understanding cancer, immune responses, and fundamental cellular processes. His work has significant implications for precision medicine and drug discovery.
Richard M. Murray is the Thomas E. and Doris Everhart Professor of Control and Dynamical Systems and Bioengineering at the California Institute of Technology (Caltech). He holds a B.S. from Caltech (1985), M.S. from UC Berkeley (1988), and Ph.D. from UC Berkeley (1990). He has served in academic roles from Assistant Professor (1991–1997) to his current endowed professorship. He chaired the Engineering and Applied Science division (2000–2005) and Biology and Biological Engineering (2020–2024). His research focuses on feedback control in biological and autonomous systems, synthetic cells, and networked control systems. Collaborators include experts in robotics, synthetic biology, and systems biology. Key awards include the IEEE Control Systems Award and election to the National Academy of Engineering. His educational contributions span courses on control systems, robotics, and bioengineering. Current research projects include the Developer Cell initiative (Sloan Foundation), layered testing for autonomous systems (AFOSR), and microbiome-based environmental solutions (CHARMME, ARO). He advises numerous graduate students and postdocs, with notable alumni in academia and industry. Labs include facilities in Keck and Steele laboratories at Caltech. His work bridges control theory, synthetic biology, and autonomous systems to address societal challenges like environmental monitoring and safe autonomy.
Jonas Fischer is the head of the Explainable Machine Learning group at the Max Planck Institute for Informatics, Department of Computer Vision and Machine Learning. His research focuses on interpreting complex machine learning models, particularly in genomics and healthcare, aiming to enhance robustness and alignment with human decision-making. Prior to his role at MPI, he was a postdoctoral fellow at Harvard University's Department of Biostatistics, where he worked on interpretable models for gene regulatory systems in cancer. Education: PhD in Computer Science from Saarland University (2022), with a thesis titled More than the sum of its parts , exploring the intersection of pattern mining and deep learning. He has contributed to advancing methods in neural network pruning, federated learning, and low-dimensional embeddings (e.g., dtSNE, Mercat). His work bridges computational biology, data mining, and machine learning, with applications in DNA methylation analysis, graph-based differential networks, and biomedical informatics. Key research areas include: (1) Explainable AI and neural network interpretability, (2) Biomedical applications of machine learning (e.g., gene regulatory networks, cancer genomics), (3) Low-dimensional embeddings and visualization techniques, (4) Federated learning for privacy-preserving collaborative models, and (5) Pattern mining for error analysis in NLP and classification tasks. Publications span top venues like NeurIPS, ICLR, Bioinformatics, and Genome Biology. His group develops tools such as BONOBO for omics data integration and node2vec2rank for scalable graph analysis. He actively collaborates with biomedical researchers to address challenges in data-driven healthcare and precision medicine.
Han Liu is a Professor in the Department of Computer Science at Northwestern University's McCormick School of Engineering. He directs the MAGICS (Modern Artificial General Intelligible and Computer Systems) Lab and the Center for Foundation Models and Generative AI at Northwestern, with prior roles as director of the Deep Reinforcement Learning Center at Tencent AI Lab and professor at Princeton and Johns Hopkins Universities. PhD in Machine Learning and Statistics from Carnegie Mellon University (2012), advised by John Lafferty and Larry Wasserman Han Liu's research focuses on integrating artificial intelligence with computer systems, particularly through foundation models and probabilistic graphical models. His work aims to revolutionize science, engineering, and business by deploying statistical machine learning methods in edge and cloud computing environments. Recent research trends include transformer-based models, modern Hopfield networks, genomic foundation models, and theoretical analysis of attention mechanisms. His 2025 publications explore topics like species differentiation with DNA embeddings, universal approximation capabilities of transformers, and metaverse spatial reasoning. Alfred P Sloan Fellowship in Mathematics IMS Tweedie New Researcher Award ASA Noether Young Scholar Award NSF CAREER Award Presidential Early Career Awards for Scientists and Engineers Han Liu serves as associate editor for the Journal of American Statistical Association, Electronic Journal of Statistics, Technometrics, and the Journal of Portfolio Management. He has directed research centers at Northwestern and contributed to major conferences as area chair (NeurIPS, ICML, ICLR).
Sriram Subramaniam is a Professor in the Department of Biochemistry and Molecular Biology at the University of British Columbia (UBC) and holds the Gobind Khorana Canada Excellence Research Chair in Precision Cancer Drug Design. His research leverages cryo-electron microscopy (cryo-EM) to advance structural biology and drug design, focusing on protein dynamics and therapeutic target identification. Education: PhD in Physical Chemistry (1987) from Stanford University; MSc in Chemistry (1981) from Indian Institute of Technology, Kanpur. Subramaniam's interdisciplinary work combines cryo-EM with computational tools and molecular biology to study protein structures at atomic resolution. His lab has pioneered cryo-EM applications in precision medicine, including mapping small molecule drugs on patient-specific cancer mutants. Recent publications (2024-2022) highlight his contributions to understanding SARS-CoV-2 immune evasion, structural mechanisms of ATPases, and AI integration in structural biology. His research spans viral entry mechanisms, CRISPR systems, and neurodegenerative disease pathways. Scientific Awards: Gobind Khorana Canada Excellence Research Chair NIH Director’s Award for Scientific Excellence Fellow of the Biophysical Society Breakthrough Prize nomination Based at the Djavad Mowafaghian Center for Brain Health, Subramaniam leads the Program in Cryo-EM Guided Drug Design, contributing to over 177 peer-reviewed publications with a career h-index of 58 and citations exceeding 12,340.
Suhas Diggavi is a Professor in the Department of Electrical and Computer Engineering at the University of California, Los Angeles, within the Henry Samueli School of Engineering and Applied Science. His primary research area is Signals and Systems, with a strong focus on information theory and its interdisciplinary applications. His research interests span Information Theory , Machine Learning , Differential Privacy , Federated Learning , Cyber-Physical Systems , and Bio-informatics . He investigates fundamental limits and practical algorithms for secure, efficient, and robust data processing in distributed and networked environments. The recent publications highlight a strong trend in privacy-preserving machine learning, particularly in the shuffled model of differential privacy , communication-efficient distributed SGD , and robust optimization . His work bridges theoretical information-theoretic foundations with real-world applications in federated learning, wireless networks, and genomic data analysis. Notable scientific awards include: Guggenheim Foundation Fellow (2021) ACM CCS Best Paper Award (2021) IEEE Fellow (2013) IEEE Donald G. Fink Prize Paper Award (2006) Multiple Google, Amazon, and Facebook Research Awards Suhas Diggavi actively advises graduate students and leads a research group focused on learning, information, and optimization. His work is supported by major industry grants and collaborations, particularly in privacy and distributed learning. He has made significant contributions to information-theoretic models in bio-sequencing and wireless security. He leads the LIOS (Learning, Information, Optimization, and Stochastic Systems) research group at UCLA, where his team develops theoretical frameworks and practical algorithms for next-generation data-driven systems.
Professor Todd Squires is a distinguished faculty member in the Department of Chemical Engineering at the University of California, Santa Barbara, within the Robert Mehrabian College of Engineering. His research focuses on the fundamental principles of transport phenomena as applied to interfaces, membranes, and complex fluids, employing theoretical, computational, and experimental approaches to address significant challenges in micro-scale fluid mechanics. Dr. Squires' educational background includes: BS in Physics, UCLA (1995) BA in Russian Language and Literature, UCLA (1995) PhD in Physics, Harvard University (2002) His research interests span microfluidics and electrokinetics, active and nonlinear microrheology of complex materials, polymer dynamics and sensors, with particular emphasis on non-linear electrokinetic flows, interfacial rheology, and the self-assembly of nanostructured materials. His work bridges fundamental fluid mechanics with practical applications in microfluidic devices, energy storage, and biomedical systems, demonstrating the versatility of this fascinating field. Analysis of Professor Squires' recent publications reveals a consistent focus on interfacial phenomena, with particular attention to the rheological properties of fluid interfaces, particle dynamics in complex fluids, and novel microfluidic techniques for measuring and manipulating these systems. His research demonstrates strong interdisciplinary connections between chemical engineering, physics, and materials science, with applications spanning energy storage, biomedical engineering, and environmental systems. Professor Squires has received numerous prestigious awards and honors: 2018 Robert W. Vaughan Lecture in Chemical Engineering, Caltech 2015 Elected Fellow of the American Physical Society 2013 Mid-Career Award, American Electrophoresis Society 2012 The Dudley Saville Memorial Lecture at Princeton 2010 Pierre Gilles de Gennes Prize 2010 Allan P. Colburn Memorial Lectureship, University of Delaware 2009 Francois Frenkiel Award for Fluid Mechanics 2009 Camille Dreyfus Teacher-Scholar Award 2008 Beckman Young Investigator 2007 NSF CAREER Award 2005 'Rising Star' - Chronicle of Higher Education As principal investigator of the Squires Group, Professor Squires leads a dynamic research team that combines experimental, theoretical, and computational approaches to investigate transport phenomena at interfaces. His work has been supported by major funding agencies including the National Science Foundation, with his CAREER award indicating early recognition of his potential as both researcher and educator. While specific grant details aren't provided in the source material, his extensive publication record and prestigious awards suggest robust and sustained research funding. The Squires Group maintains state-of-the-art laboratory facilities for studying micro-scale fluid mechanics, including specialized equipment for microrheology measurements, microfluidic device fabrication, and interfacial characterization. Their research environment fosters collaboration across disciplines, with connections to materials science, physics, and biomedical engineering researchers at UCSB and beyond.
Alexis Battle is an Associate Professor at Johns Hopkins University with appointments in Biomedical Engineering , Computer Science , and Genetic Medicine (secondary). She directs the Malone Center for Engineering in Healthcare and serves as Deputy Director of the Data Science and AI Institute . Educated at Stanford University (PhD in Computer Science, 2013), Battle transitioned to academia after leadership roles at Google. Research Focus: Battle’s work bridges genomics and machine learning , emphasizing the impact of genetic variation on human health. Her lab develops tools like Watershed to predict functional effects of rare variants, aiming to enhance rare disease diagnosis. Key themes include non-coding DNA analysis , personalized genomics , and systems biology , with applications in cardiovascular disease and neurodegenerative disorders . Publications & Awards: Over 60 peer-reviewed articles in journals like Nature , Science , and Genome Biology , with recent emphasis on single-cell transcriptomics , multiomics integration , and telomere biology . Recipient of the President’s Frontier Award (2022), Microsoft Investigator Fellowship (2019), and Searle Scholar (2016). Scientific Awards: 2022 President’s Frontier Award 2019 Microsoft Investigator Fellowship 2019 Johns Hopkins Discovery Award 2017 Johns Hopkins Catalyst Award 2016 Searle Scholar Advising & Funding: Mentors 11 PhD students, 3 undergraduates, and postdoctoral fellows. Her research is funded by NIH, Searle Scholars, and institutional grants. The Battle Lab collaborates on projects like the GTEx Consortium , focusing on gene regulation and clinical genomics .
Yaojun Zhang is an Assistant Professor in the Department of Physics & Astronomy and the Department of Biophysics at Johns Hopkins University. She earned her PhD in Physics from the University of California, San Diego (2015), followed by postdoctoral fellowships at the Princeton Center for Theoretical Science (2015-2018) and the Princeton Center for the Physics of Biological Function (2018-2021). Her research focuses on biological physics, particularly the complex behaviors of biomolecules and their assemblies across scales—from single-molecule folding to intracellular transport and biomolecular phase separation. She employs theoretical, mathematical, and computational tools to bridge biological questions with physical principles. Education PhD in Physics, University of California, San Diego (2015) Postdoctoral Fellowships: Princeton University (2015-2021) Research Interests Her group studies biomolecular condensates and liquid-liquid phase separation, exploring how microscopic interactions determine macroscopic properties of cellular compartments. Key areas include: Biomolecular condensate formation and dynamics Phase separation in cellular environments Interactions between biomolecules and cellular components Biophysics of intracellular transport Collaborations & Tools Zhang collaborates with experimentalists to validate theoretical models and develops frameworks for understanding condensate functions, such as surface tension, stoichiometry, and phase diagrams. Her work addresses challenges like condensate stability, molecular exclusion, and biological function regulation. Labs & Resources She leads the Zhang Lab , which integrates experimental and computational approaches. Her team’s research is supported by resources at the Bloomberg Center for Physics and Astronomy.
Frank L. Brown is a Professor of Chemistry & Biochemistry at the University of California, Santa Barbara, with a joint appointment in Physics and the Biomolecular Sciences & Engineering (BMSE) program. His research focuses on theoretical and computational studies at the interface of physical chemistry and biophysics, particularly biomembrane dynamics and spectroscopy. Dr. Brown received his B.S. in Chemistry and B.A. in Applied Mathematics from UC Berkeley, followed by a Ph.D. in Physical Chemistry from MIT. He has held postdoctoral appointments at UC San Diego and the University of Chicago before joining UCSB in 2001. He is the recipient of prestigious awards including the Alfred P. Sloan Research Fellowship and the Presidential Early Career Award in Science and Engineering. His laboratory employs tools from statistical mechanics, hydrodynamics, and quantum mechanics to study biomembrane structure, dynamics, and interactions with embedded proteins. Key research areas include lipid bilayer fluctuations, membrane protein diffusion, and interpretation of spectroscopic techniques like single-molecule fluorescence and neutron spin echo. Dr. Brown has mentored numerous graduate students and postdoctoral researchers, with notable alumni including Brian Camley, Max Watson, and Golan Bel. His research is supported by grants from agencies such as the National Science Foundation and the Department of Energy. He directs the Brown Research Group, which collaborates with institutions like the CNSI Center for Scientific Computing. His work bridges computational modeling and experimental biophysics, advancing understanding of membrane systems in health and disease.
Gail E. Kaiser is a Professor of Computer Science and the Director of the Programming Systems Laboratory (PSL) in the Computer Science Department at Columbia University. She has been with Columbia University since 1985, becoming a full Professor in 1998. Prof. Kaiser's research spans software engineering, program analysis, software testing, and software security, with recent focus on addressing challenges in AI/ML systems testing and security. Prof. Kaiser received her PhD in Computer Science from Carnegie Mellon University in 1985 and her ScB in Computer Science and Engineering from MIT in 1979. Her dissertation at CMU was titled "Semantics for Structure Editing Environments" under advisor Nico Habermann, and at MIT she completed "Automatic Extension of an Augmented Transition Network Grammar for Morse Code Conversations" under advisor Al Vezza. Prof. Kaiser's research interests primarily focus on software engineering following a systems building approach, with recent emphasis on static and dynamic program analysis techniques to improve software reliability and security. Since 2005, she has investigated testing "non-testable" programs, particularly in machine learning, data mining, and scientific computing applications where traditional testing oracles are insufficient. She has developed novel techniques and tools for detecting bugs and verifying repairs in complex systems. Concurrently, she has worked on collaboration environments for computational scientists, creating knowledge sharing and domain-aware environments to support scientific workflows. Prof. Kaiser's recent publications demonstrate a strong focus on the intersection of software engineering and artificial intelligence. Her work addresses critical challenges in testing AI systems, code understanding through deep learning, vulnerability detection, and educational tools for computational thinking. There's a clear evolution from traditional software engineering topics toward AI/ML applications, with particular emphasis on metamorphic testing for non-testable systems, code similarity analysis, and educational applications. Prof. Kaiser has received numerous prestigious awards throughout her career: Distinguished Journal Award (10 Years) from 18th IEEE International Conference on Software Testing, Verification and Validation (ICST), April 2025 Best Research Paper Award at 24th IEEE International Conference on Source Code Analysis & Manipulation (SCAM), October 2024 Distinguished Reviewer Awards for ASE 2024 and FSE 2024 ACM SIGSOFT Distinguished Paper Award for "CONCORD: Clone-aware Contrastive Learning for Source Code", July 2023 Best Student Paper Award at ICCE 2021 Multiple ACM SIGSOFT Distinguished Paper Awards dating back to 2014 Presidential Young Investigator in Software Engineering and Software Systems from NSF (1988-1993) Prof. Kaiser has chaired Columbia's doctoral program since 1997 and served on editorial boards including IEEE Internet Computing and as a founding associate editor of ACM Transactions on Software Engineering and Methodology. Her lab has been continuously funded by major agencies including NSF, NIH, DARPA, ONR, NASA, and numerous companies. Current grants include significant NSF funding for secure containers architecture, learning semantics of code for software assurance, and finding semantic security bugs. As Director of the Programming Systems Laboratory (PSL), Prof. Kaiser leads research in software systems, program analysis, and software testing. The lab has developed numerous tools and techniques for software reliability and security, with recent focus on challenges in AI/ML systems. Her work bridges theoretical foundations with practical applications, often resulting in deployable tools that address real-world software engineering challenges.
