Timothy Patrick Jenkins

Timothy Patrick Jenkins is Associate Professor at DTU's Department of Biotechnology and Biomedicine, specializing in computational approaches to protein design and proteomics. His research integrates machine learning with experimental biology for biotherapeutic development.

Research domains include:

• AI-driven protein design
• De novo peptide sequencing algorithms
• Computational structural biology
• Venom proteome analysis
• Directed evolution

Recent publications demonstrate innovations in diffusion-based peptide sequencing, plasmid engineering techniques, and computational toxin analysis. Research contributes to therapeutic antibody design and proteomics methodology advancement.

Supervision portfolio includes PhD projects on:

• Deep immune receptor modeling
• AI-driven protein binder design
• Poly-specific peptide engineering
• Nanobody optimization
• Analytical tool compound development