
معرفی
Florian Muller is a Group Leader and Researcher at the Photonic BioImaging (UTechS PBI), Pasteur Institute, Paris. His work integrates advanced microscopy, image analysis, and single-RNA imaging to study spatial transcriptomics and gene regulation.
- Institution: Pasteur Institute
- Department: Photonic BioImaging (UTechS PBI)
- Role: Group Leader (Principal Investigator)
His research focuses on quantitative imaging, spatial transcriptomics, and bioimage analysis, with an emphasis on developing computational tools for cell segmentation and RNA localization. He leads projects such as Fish&Chips and autoFISH, and develops open-source software including RNA2seg and Comseg.
The recent publications highlight a strong trend in machine learning for image analysis, spatial omics, and high-throughput RNA imaging, particularly using smFISH and point cloud methods. His work bridges biology, computer science, and microscopy.
He mentors a team including a PhD student and post-doctoral researchers, contributing to training and collaborative science at the Pasteur Institute.




