Prof. Willy Tinner is a leading academic at the University of Bern, serving as Head of the Paleoecology section and Vice Executive Director within the Institute of Plant Sciences. His research focuses on reconstructing past environmental changes through pollen analysis, vegetation dynamics, and human-ecosystem interactions. Tinner's work integrates paleoecological data with climatology, archaeology, and conservation biology to understand long-term ecological processes. His expertise spans Holocene climate impacts, Neolithic land use patterns, and biodiversity conservation challenges in alpine and Mediterranean ecosystems. Notable research includes studies on Fagus-Quercus forest coexistence in Italy, Abies alba climatic adaptations, and human-driven vegetation changes across Europe. Tinner collaborates internationally, contributing to projects in Greece, Ukraine, and the Balkans. He has published extensively on topics such as fire regimes, lake sediment archives, and the ecological consequences of ancient agricultural practices. His leadership positions reflect his role in shaping Switzerland's ecological research priorities through institutions like WSL Cadenazzo.
Dr. Giulia Donati is a Researcher at Eawag – Swiss Federal Institute of Aquatic Science and Technology, affiliated with the Department of Environmental Social Sciences. She holds a PhD from ETH Zürich and has extensive experience in conservation biology, inter/transdisciplinary research, and project management. Her work focuses on social-ecological systems, ecological connectivity, and biodiversity conservation in aquatic and terrestrial ecosystems. Education: PhD (2016–2020, ETH Zürich), MSc (2013–2015, University of Lausanne), BSc (2010–2013, University of Lausanne). Notable roles include postdoctoral research on BlueGreenNet (2021–2024) and Connect-HDL (2020), and leadership in the Save Our Seas Foundation project (2019–2020). Research emphasizes social-ecological networks, blue-green infrastructure, and amphibian connectivity in human-dominated landscapes. Projects like BlueGreenNet and Connect-HDL integrate ecological modeling with stakeholder collaboration to enhance biodiversity. Her work bridges ecology, policy, and urban planning to address global conservation challenges. Publications span topics from clownfish genetics to urban biodiversity frameworks, reflecting interdisciplinary approaches. Active in science communication and policy-relevant research, she collaborates across sectors to foster sustainable solutions. Current affiliations include Eawag’s PEGO research group and the Department of Environmental Social Sciences.
Prof. Knut Drescher is an Associate Professor at the Biozentrum, University of Basel , leading a research group focused on bacterial biofilms , swarming , and microbial multicellularity . Previously, he served as a Professor of Biophysics and Max Planck Research Group Leader at Philipps-Universität Marburg (2015-2021) and conducted postdoctoral research at Princeton University. Research Interests: Physical and biological mechanisms of biofilm formation Cell-cell interactions in microbial communities Antibiotic resistance in biofilms Hydrodynamics of bacterial swarms Evolution of cooperation in multispecies biofilms Development of bioimaging software (BiofilmQ, BacStalk) Scientific Awards: 2023: SNSF Consolidator Grant 2019: Heinz Maier-Leibnitz Prize (DFG), VAAM Research Prize, IUPAP Young Scientist Prize 2016: ERC Starting Grant Advising & Grants: Advises PhD and Master's students in microbiology, biophysics, and bioinformatics Secured major grants from ERC , HFSP , and DFG
Prof. Dr. Alex Hall is an Associate Professor at the Department of Environmental Systems Science and Head of the Institute of Integrative Biology at ETH Zürich , Switzerland. He holds a PhD from the University of Edinburgh (2008), followed by postdoctoral work at the University of Oxford and ETH Zürich, including prestigious SNSF Ambizione and Marie Curie Intra-European fellowships. Research Focus: The Hall lab investigates Microbial interactions in human microbiomes Antibiotic resistance evolution Horizontal gene transfer dynamics Computational and in vitro modeling of microbial communities Evolutionary medicine applications Scientific Contributions: His recent studies analyze probiotic treatments for Staphylococcus aureus decolonization, strain-specific ecological success in gut microbiomes, and CRISPR-Cas system roles in plasmid conflicts. The lab employs computational frameworks combined with experimental validations. Scientific Awards: SNSF Ambizione fellowship Marie Curie Intra-European fellowship He also serves on the SNSF PRIMA fellowship evaluation panel and the ETH Zürich Coordination Council Medicine .
Swiss Federal Institute of Technology in LausanneSwitzerland
Lucas Paoli is a Researcher and Course Instructor at École Polytechnique Fédérale de Lausanne (EPFL), Switzerland. He leads the Paoli Lab (Microbiome Immunity and Ecology) within the Global Health Institute (GHI) under the School of Life Sciences (SV). His roles include scientific collaboration and teaching responsibilities in life sciences engineering. Paoli holds a PhD in Microbiome Research from ETH Zürich (2018-2023), an M.Phil. in Environmental Policy from the University of Cambridge (2017-2018), and an M.Sc. in Ecology and Evolution from École normale supérieure (2015-2017). Research Focus: His work bridges microbial immunity and ecology, investigating how microbes defend against viral infections across ecosystems like oceans and human microbiomes. Techniques include global-scale metagenomics and functional genomics to study immune strategies and ecological interactions. Key themes involve microbial community dynamics, viral defense mechanisms, and the impact of environmental factors on microbial immunity. Lab & Education: The Paoli Lab explores microbiome-immunity interactions with a focus on ecological contexts. Paoli supervises PhD students in Life Sciences Engineering. His research outputs span microbial ecology, metagenomic tool development, and marine microbiome studies. Contact: lucas.paoli@epfl.ch, AAB 1 39, +41 21 693 16 99.
Christof Bigler is an Adjunct Professor at ETH Zurich's Department of Environmental Systems Science, where he also serves as Deputy Group Head of the Professorship of Forest Ecology and Senior Scientist. He leads the ETH Tree-Ring Laboratory and teaches courses in dendroecology, applied statistics, and forest ecology. His research focuses on tree mortality, climate impacts on forests, disturbance ecology, and phenology, with a strong emphasis on quantitative methods and long-term data analysis. Bigler holds a PhD in Forest Ecology from ETH Zurich (2003), awarded the ETH Medal for his thesis on tree mortality modeling. He has conducted postdoctoral research in Switzerland and the University of Colorado Boulder, exploring disturbance interactions and dendroecology. He has supervised numerous PhD and master's students, contributing to over 150 publications in top journals like Nature Climate Change and Ecology . His work integrates dendrochronological techniques with statistical modeling to understand forest responses to climate change, including drought effects, tree competition, and mortality patterns. He serves on editorial boards for journals like Agricultural and Forest Meteorology and reviews proposals for national and international science foundations. His research also includes managing forest reserves and studying natural forest dynamics in the Alps and beyond. Education: PhD in Forest Ecology, ETH Zurich (2003) Postdoctoral Research: University of Colorado Boulder (2004–2005) Diploma in Biology, ETH Zurich (1998) Key Awards: ETH Medal for PhD thesis (2003) Professional Roles: Member of the Tree-Ring Society, Editor for Frontiers in Forests , and Commission for Phenology and Seasonality (KPS). Bigler's lab and fieldwork emphasize long-term datasets, including analyses of tree-ring records from Swiss National Park and other reserves. His research highlights the critical role of historical climate data in predicting future forest resilience and adaptation strategies.
Simone Fior is a Lecturer at the Department of Environmental Systems Science , ETH Zürich , focusing on ecological genetics and plant adaptation. Their research integrates genomic, quantitative genetics, and ecological field experiments, particularly on Dianthus (Caryophyllaceae) along altitudinal and climatic gradients. Recent work explores climate-induced range shifts, local adaptation, and genomic responses to environmental changes. Professional experience includes roles at ETH Zürich since 2013 (Senior Assistant, Postdoc) and prior positions at the Edmund Mach Foundation (2009-2012) and University of Insubria (2007-2008). Education spans a PhD in Plant Biology (University of Milan, 2007) and an MSc in Natural Sciences (University of Milan, 2003). Simone co-organizes the Bioinformatics for Adaptation Genomics Winter School . Key research areas include adaptive divergence , polygenic adaptation , climate change biology , and phylogenomics . Articles emphasize genomic selection signatures, functional-structural modeling, and ecological-genetic interactions. Notable collaborations involve Jake Alexander, Alex Widmer, and interdisciplinary teams at ETH Zurich.
Swiss Federal Institute of Technology in LausanneSwitzerland
Tom Ian Battin is a Full Professor at the École Polytechnique Fédérale de Lausanne (EPFL), affiliated with the School of Architecture, Civil and Environmental Engineering (ENAC). He holds roles in three departments: the River Ecosystems Research Laboratory (RIVER), the Laboratory of Management of Infrastructures, Networks and Construction (LIMNC-GE), and the SSIE Teaching Unit (ENS). His research focuses on aquatic ecosystems, microbial communities in glacier-fed streams, climate change impacts, and biogeochemical processes in alpine environments. He advises numerous doctoral students and has supervised over ten theses at EPFL. Battin teaches courses such as 'Fundamentals in Ecology,' 'Aquatic Ecosystems,' and 'Global Change Ecology and Fluvial Ecosystems.' He is actively involved in academic governance, serving on the EPFL Academic Strategic Committee (ASC) and the ENAC Academic Evaluation Committee (CEA). His work investigates how glacier retreat affects stream microbiomes, dissolved organic carbon dynamics, and ecosystem resilience. Key themes include microbial metabolism, biofilm functionality, and the interplay between hydrology and biogeochemistry. Battin leads research projects on global glacier-fed stream biogeography and the resistome of stream biofilms. His interdisciplinary approach bridges ecology, microbiology, and environmental engineering, addressing critical questions about mountain ecosystems under climate change.
Andrea Carminati is a Full Professor at the Department of Environmental Systems Science, ETH Zurich. His research focuses on soil-plant hydraulics , rhizosphere dynamics , and drought adaptation mechanisms in crops and forest species. He investigates how root traits , soil texture , and biogenic substances like mucilage influence water uptake , gas exchange , and soil microbial activity . Key Research Areas: Soil-Plant Water Relations Rhizosphere Hydrology Drought Resistance in Maize and Trees Microplastics in Agricultural Soils Hydraulic Redistribution and Isohydricity Contact: Email: andrea.carminati@usys.ethz.ch Phone: +41 44 633 61 60 Recent studies highlight his work on soil texture-specific transpiration responses , rhizosheath properties under drought , and microplastic impacts on soil hydrology . He employs advanced techniques like X-ray computed tomography and neutron radiography to visualize root-soil interactions.
Dr. Andre Kahles is a Lecturer in the Department of Computer Science at ETH Zürich, specializing in biomedical informatics. His research focuses on computational methods for analyzing large-scale genomic and transcriptomic data, with applications in cancer genomics, metagenomics, and precision medicine. He has contributed to the development of tools such as SplAdder for alternative splicing analysis, MetaGraph for petascale genomic data exploration, and SECEDO for subclone detection in cancer genomes. His work bridges algorithmic innovation with biological insights, addressing challenges in single-cell analysis, genome graph alignment, and multi-omics integration. Key research themes include: Developing scalable algorithms for processing nanopore sequencing and metagenomic data Characterizing somatic mutations and non-coding drivers in cancer genomes Advancing genome graph-based alignment and annotation methods Integrating multi-omics data for clinical decision-making and tumor profiling His publications span topics like RNA-seq analysis, chromothripsis in cancers, and global urban microbiome tracking through the MetaSUB consortium. Kahles has collaborated on landmark projects including the Pan-Cancer Analysis of Whole Genomes (PCAWG) and the Tumor Profiler Study.
Philippe Christe is an Associate Professor in the Department of Ecology and Evolution at the University of Lausanne (UNIL), Faculty of Biology and Medicine. His research centers on host-parasite interactions, with a focus on bats, birds, and their ectoparasites, integrating behavioral, physiological, and genetic approaches. He leads the Christe Group, which investigates evolutionary and ecological dynamics in host-parasite systems, particularly avian malaria and bat-mite relationships. He is actively involved in conservation initiatives, including the Jorat Peri-Urban Nature Park, and collaborates with KORA on human-wildlife interactions. Bachelor's degree in biology, UNIL (1989) PhD in Zoology and Animal Ecology, UNIL (1994) Philippe Christe’s research interests lie at the intersection of parasitology, evolutionary ecology, and conservation biology. He investigates how host defenses evolve in response to parasitic pressures, examining trade-offs between immunity and life history traits such as reproduction and survival. His work often integrates field studies with experimental and molecular techniques. Key model systems include Parus major (great tit) and Culex pipiens in avian malaria, and bat species with their ectoparasitic mites. He also explores broader ecological interactions, including predator-prey dynamics and wildlife conservation in human-modified landscapes. His recent publications reflect a strong emphasis on disease ecology, wildlife conservation, and molecular methods. Articles span topics such as avian malaria transmission, lynx population dynamics, snow leopard behavior, and habitat fragmentation effects on insects. These works employ advanced techniques like DNA metabarcoding, spatial modeling, and long-term monitoring, demonstrating a trend toward interdisciplinary, data-driven ecological research with direct conservation applications. Dubois Foundation Prize for an educational CD-Rom on bats (2004) Communication Award from the Faculty of Biology and Medicine of UNIL (2017) Philippe Christe has supervised numerous PhD and Master’s students, contributing significantly to training the next generation of ecologists and evolutionary biologists. His group collaborates widely with institutions such as the Museum of Zoology in Lausanne and KORA, and participates in large-scale conservation projects involving snow leopards, lynx, and bats. He has been involved in research grants related to host-parasite coevolution, wildlife monitoring, and conservation strategies. His leadership in establishing the Jorat Peri-Urban Nature Park and involvement in the UNIL Interdisciplinary Center for Mountain Research highlight his commitment to applied science and environmental stewardship. He leads the Christe Group, which conducts research on host-parasite coevolution, with a focus on bats and their ectoparasites, and birds affected by avian malaria. The group combines fieldwork, laboratory experiments, and molecular analyses, and includes post-docs, PhD students, and technical staff. Collaborations extend to researchers in Bern, Paris, and Spain, fostering an international and interdisciplinary research environment.
Dr. Anton Lavrinienko is a Lecturer at the Department of Health Sciences and Technology at ETH Zürich, affiliated with the Biotechnology of Food Systems group. His research focuses on microbiome studies, environmental health, and the impact of pollution and radiation on ecosystems and microbiota. He is based in Zurich, Switzerland, and teaches the course Applied Bioinformatics: Microbiomes (Autumn Semester 2025). His work integrates molecular biology, ecology, and public health to address challenges in food systems and environmental sustainability. Research interests include microbial diversity in polluted environments, radiation effects on wildlife, and the application of genomics to biodiversity conservation. He collaborates on projects such as the European Reference Genome Atlas and studies microbial responses to anthropogenic contamination in urban and natural ecosystems. Dr. Lavrinienko’s studies often involve fieldwork in regions like Chernobyl, investigating how chronic radiation and metal pollution alter microbiota and organismal health. His findings contribute to understanding ecological resilience and human health implications of environmental stressors. He emphasizes open data standards and FAIR principles in microbiome research.
Ueli Grossniklaus is an Ordinary Professor at the University of Zurich within the Faculty of Mathematical and Natural Sciences , affiliated with the Department of Plant and Microbiology . His work focuses on plant developmental biology, particularly epigenetic and genetic mechanisms governing reproduction and adaptation. Key Courses: Epigenetics, Plant Biology Workshop, Group Seminars on Current Research Laboratory Techniques: Advanced methods in plant cell mechanics, transcriptomics, and genome editing Research Interests span plant epigenetics, reproductive biology, and the interplay between environmental stress and genetic regulation. He investigates: Mechanistic control of gametogenesis and fertilization Epigenetic contributions to plant adaptation Evolutionary implications of asexual reproduction Biophysical forces in plant cell growth Publication Trends (2025–2018) reveal expertise in: Arabidopsis and fern model systems Epigenetic regulation (DNA methylation, histone dynamics) Apomixis and hybrid seed failure mechanisms Biomechanics of pollen tubes and carnivorous plants Genome editing tools (CRISPR) and long-read sequencing Scientific Collaborations include interdisciplinary projects on: Microfluidic devices for plant cell analysis Gene drive ecology and ethics 3D imaging of plant reproductive structures Advising and Grants focus on mentoring through research internships in developmental biology, genetics, and systems biology. His lab engages in: Epigenetic response to environmental stress Cell wall mechanics in reproduction Computational modeling of plant growth Laboratory Teams integrate plant biologists, bioengineers, and computational scientists to study: Mechanistic gene regulation Evolutionary developmental biology Microrobotics for cellular force measurement
Professor Sebastian Hiller is a Full Professor at the Biozentrum of the University of Basel, Switzerland, where he leads a research group focused on structural biology and biophysics. His laboratory specializes in using nuclear magnetic resonance (NMR) spectroscopy to elucidate the structures and functions of proteins and their interactions at the atomic level. His research spans several key areas including molecular chaperones and protein folding mechanisms, outer membrane protein biogenesis in bacteria, and kinase signaling pathways. Notably, his group has made significant contributions to understanding how chaperones like trigger factor function, the mechanisms of outer membrane protein assembly through the Bam complex, and dynamic kinase interactions. Their work has direct implications for neurodegenerative diseases and antibiotic development. The Hiller lab's recent publications demonstrate a strong focus on NMR methodology development, protein folding dynamics, and structural mechanisms of antibiotic action. Their research on darobactin's mechanism of action against Gram-negative bacteria represents a significant advance in antibiotic discovery. The group frequently publishes in high-impact journals including Nature, Science, and Nature Communications. ICMRBS Founder's Medal (2018) EMBO Young Investigator (2014) ERC starting grant (2011) SNSF professorship (2010) SNSF scholarship for young researchers (2008) Professor Hiller supervises numerous PhD students and postdoctoral researchers, with many alumni having secured prestigious positions in academia and industry. His laboratory maintains strong collaborations across multiple institutions and has received significant funding through ERC grants and other competitive mechanisms. The Hiller group also operates advanced NMR facilities that serve the broader research community at the University of Basel.
Reto Nyffeler , PD Dr., has been Lecturer and Curator of Phanerogams at the University of Zurich since 2002. He leads the Institute of Systematic Botany’s herbarium activities and heads the Nyffeler research group, collaborating closely with the Sukkulenten-Sammlung Zürich. Education & Career Diploma in Systematic Botany, University of Zurich (1988-1991) Ph.D., Institute of Systematic Botany, University of Zurich (1994-1997) Post-doctoral researcher & Mercer Fellow, Arnold Arboretum, Harvard University (1997-2000) Post-doctoral researcher, Stanford University (2000-2001) Lecturer and Herbarium Curator, University of Zurich (2002-present) Research Focus Nyffeler’s work integrates plant systematics, biogeography, and phylogenetic methodology. Empirically, he concentrates on the diversification of succulent plants—especially Cactaceae—using molecular phylogenetics to untangle taxonomy, growth-form evolution, and biogeographic history. Parallel interests include the floristics of alpine regions and the systematics of Campanulaceae, Asteraceae, and Ranunculaceae. Across dozens of peer-reviewed papers (2010-2025) he has advanced family-wide phylogenies for Cactaceae and Caryophyllales, documented repeated succulent radiations, and created online taxonomic backbones such as Caryophyllales.org . His current projects combine next-generation sequencing with classical morphology to revise genera like Parodia and to understand adaptation in high-altitude Callianthemum . Students & Mentoring PhD advisee: Anita Lendel (systematics of Trichocereeae) Master advisees: 16 students (2006-2018) working on alpine ecology, cactus morphology, and floristic change Research Group & Collaborations The Nyffeler group comprises a scientific assistant (Dr. Heike Hofmann), technical and IT staff, and rotating Master students. The team maintains close collaborations with the Sukkulenten-Sammlung Zürich, Harvard’s Arnold Arboretum (Mercer Fellowship network), and multiple international cactus specialists.
