جست‌وجوی استاد و پژوهشگر

Ning Zhangمشاهده پروفایل

استادیار

• Plant Defense Mechanisms
• Genome Editing Technologies
• Crop Improvement
• +۳ مورد دیگر

Ning Zhang is an Assistant Professor in the Biology Department at James Madison University (JMU), joining in 2024. Her research focuses on enhancing crop resilience through molecular and biochemical studies of plant defense mechanisms against bacterial pathogens, alongside developing genome editing technologies for trait improvement. She holds a PhD in Horticulture and Crop Science from The Ohio State University (2016), an MS in Silviculture from Zhejiang Agriculture and Forestry University (2011), and a BS in Landscape Architecture from Shandong Agricultural University (2008). Research Interests: Dr. Zhang's lab investigates plant immunity pathways, CRISPR/Cas9 genome editing applications, and engineering crops for disease resistance. Her work integrates molecular biology, genetics, and biochemistry to tackle challenges posed by climate change and biotic/abiotic stresses. Recent Trends in Publications: Her articles concentrate on MAPK signaling pathways, NLR protein interactions, PP2C phosphatase regulation, and bacterial effector mechanisms in tomato and other crops. Key themes include immune system activation, pathogen recognition diversity, and transgenic plant development. Lab Information: The Zhang Lab at JMU is part of the Department of Biology, focusing on plant biotechnology solutions for agricultural sustainability. They collaborate on projects involving CRISPR-based gene editing and stress tolerance research.

Yin Baoمشاهده پروفایل

استادیار

• Robotics and Controls
• Agricultural Automation
• Precision Farming
• +۴ مورد دیگر

Yin Bao is an Assistant Professor in Plant and Soil Sciences and Mechanical Engineering at the University of Delaware since 2023, previously holding the same position at Auburn University's Department of Biosystems Engineering (2019-2023). He holds a BE in Mechanical Engineering from China Agricultural University (2012) and a PhD in Agricultural and Biosystems Engineering from Iowa State University (2018), followed by postdoctoral research there until 2019. His research focuses on automation technology for agriculture and forestry, leveraging robotics, machine learning, and sensing systems to develop tools for precision farming and plant phenotyping. Key areas include unmanned systems (UGVs/UAVs), spectral imaging, and AI-driven predictive models for crop and livestock management. Recent work emphasizes automated inventory systems for forest nurseries, UAV-based vegetation assessment, and machine learning applications in crop yield prediction. His publications span robotic guidance systems, root segmentation in X-ray CT scans, and equine gait analysis using deep learning. Notable projects include the Robotic Assay for Drought (RoAD) system and the 'smart canopy' sorghum initiative. Collaborative efforts involve integrating multifrequency microwave sensing and electronic nose technologies for crop quality analysis.

Richard L. Petersمشاهده پروفایل

استاد

• Tree Physiology
• Wood Formation Science
• Forest Ecology
• +۶ مورد دیگر

Prof. Richard L. Peters is a Professor and Head of the Chair of Tree Growth and Wood Physiology at the Technische Universität München (TUM) since 2024. His research focuses on tree physiology, wood formation, and climate-forest interactions. He holds a doctorate summa cum laude from the University of Basel (2018) and has conducted postdoctoral research at the Swiss Federal Institute for Forest Science (WSL) and Ghent University. His work integrates forest ecology, dendrochronology, and ecophysiology to address climate change impacts on forests. Education: B.Sc./M.Sc. in Biology at Utrecht University, Ph.D. from University of Basel (2018). Key career steps include a Swiss National Science Foundation (SNSF) fellowship at Ghent University and coordination of the Swiss Canopy Crane II project (2021). Research Interests: Tree water-use strategies, drought tolerance mechanisms, carbon allocation dynamics, and the physiological basis of tree growth. He leads interdisciplinary projects to monitor forest responses to environmental stress using tools like the TreeNet network. Awards: Early Postdoc Mobility Fellowship (SNSF, 2019), Doctorate summa cum laude (2018). Contributions: Authored >180 publications, co-developed the datacleanr R package for ecological data processing, and pioneered methods linking tree-ring data with climate models. His work emphasizes the need for better observational data to improve vegetation models.

Michael McAlpineمشاهده پروفایل

استاد

• 3D Printing
• Nanotechnology
• Biomedical Engineering
• +۴ مورد دیگر

Michael McAlpine is a Professor in the Mechanical Engineering department at the University of Minnesota . He also holds affiliations with the Biomedical Engineering and Electrical and Computer Engineering departments. His research focuses on 3D printing functional materials & devices , Nanoscale inks , Biomedical devices , Bioelectronics , and Flexible Microsystems . Research Interests : 3D Printing, Biomedical Engineering, Nanotechnology, Flexible Electronics, Microfluidics Labs : ME 361/363 Contact : mcalpine@umn.edu , (612) 626-3303, ME 117 Recent Research Trends include 3D Printed Biomedical Devices , Flexible Electronics , and Bioprinting Applications . His work spans from Spinal Organoid Formation to Programmable Drug Release Capsules . Scientific Award : Circulation Research 2020 Best Manuscript Award

Angela D Kentمشاهده پروفایل

استاد

• Microbial Ecology
• Nitrogen Cycling
• Agroecosystems
• +۳ مورد دیگر

Angela D. Kent is a Professor in the Department of Natural Resources and Environmental Sciences at the University of Illinois Urbana-Champaign, where she also serves as Director of the Program in Ecology, Evolution, and Conservation Biology within the School of Integrative Biology. She is affiliated with the Carl R. Woese Institute for Genomic Biology. Her research focuses on microbial communities in agroecosystems and natural environments, particularly their roles in nitrogen cycling, soil health, and sustainable bioenergy production. Key research interests include microbial interactions in plant-microbe systems, the impact of genetic variation in crops on microbial processes, and the ecological and biogeochemical implications of soil microbiomes. She has authored over 99 publications and supervised datasets on topics such as denitrification dynamics, rhizosphere microbiome assembly, and microbial contributions to nitrogen retention. Dr. Kent has received the NACTA Educator Award (2012) and has contributed to high-impact studies on topics like microbial community responses to environmental stressors and the application of stable isotopes in bioenergy research. Her work bridges microbial ecology, agronomy, and environmental science, emphasizing practical solutions for sustainable agriculture and ecosystem management.

Wojciech Rytterمشاهده پروفایل

استاد

• Design and analysis of computer algorithms
• Automata and formal languages
• Parallel algorithms
• +۵ مورد دیگر

Wojciech Rytter is a full professor at the Institute of Informatics, Department of Mathematics and Informatics at the University of Warsaw, Poland, holding this position continuously since October 1971. His academic career includes significant international appointments as full professor at New Jersey Institute of Technology (2002-2004), Liverpool University (1997-2002), and Bonn University (1994-1995), and as visiting professor at University of California, Riverside (1992-1993) and University of Warwick (1985-1986). He earned his MSc in 1971, PhD in 1975, habilitation in 1985, and was awarded the scientific degree of professor in 1997, all from Warsaw University. Professor Rytter's research focuses on the design and analysis of computer algorithms, with particular expertise in automata and formal languages, parallel algorithms, and text algorithms. His work spans efficient sequential and parallel algorithms, automata theory, complexity of recognition and parsing of context-free languages, pattern matching, algorithmics of WWW, parallel combinatorial computing, graph-theoretic algorithms, and algorithmics of highly compressible objects. His theoretical contributions have practical applications in computational biology, bioinformatics, and text processing systems. His recent publications (2022-2025) demonstrate continued activity in string algorithms, particularly in pattern matching, string covers, and combinatorics on words, with a strong focus on theoretical computer science with applications in bioinformatics. 200 problems on automata, languages, computations (Cambridge University Press 2023) 125 Problems in Text Algorithms (Cambridge University Press, 2021) Jewels of Stringology (World Scientific, 2002) Fast parallel algorithms for matching problems in graphs (Oxford University Press 1998) Text algorithms (Oxford University Press 1994) Professor Rytter has collaborated extensively with researchers including Jakub Radoszewski, Tomasz Walen, Tomasz Kociumaka, and Maxime Crochemore. He is a member of the Academy of Europe (elected 2011, Informatics section) and has authored or co-authored more than 130 publications. He maintains an active research laboratory focused on string algorithms and combinatorics on words at the University of Warsaw.

• Machine Learning
• Genomics
• Gene Regulatory Networks
• +۳ مورد دیگر

Sushmita Roy is a Professor at the University of Wisconsin–Madison, affiliated with the Department of Computer Sciences and the College of Letters and Science. Her research focuses on developing computational methods in statistical machine learning to understand gene regulatory networks in living cells, particularly under environmental, developmental, disease, and evolutionary contexts. She explores bulk and single-cell genomic data integration to study processes like cell fate specification, host-microbe interactions, and diseases such as cancer and neurodevelopmental disorders. Her work emphasizes three key areas: inference of genome-scale transcriptional networks, evolutionary analysis of regulatory networks, and 3D genome organization dynamics. Roy’s lab collaborates across disciplines, leveraging genomic data from plant and mammalian systems. She has contributed to methodologies for analyzing chromatin accessibility, single-cell profiling, and network-based models of pathogen systems. Her affiliations include Wisconsin Institutes for Discovery, and she is a leader in computational biology and systems genomics research.

• Forest Ecology
• Global Change Biology
• Root Ecology
• +۶ مورد دیگر

Prof. Dr. Ina Christin Meier serves as Head of Department and Head of Research Unit for Functional Forest Ecology at the University of Hamburg, within the Faculty of Mathematics, Computer Science and Natural Sciences. She is affiliated with the Institute of Wood Sciences (Institut für Holzwissenschaften) in the Department of Biology, where she leads research on forest ecosystem responses to global environmental changes at Ohnhorststrasse 18, 22609 Hamburg. Dr. Meier's research focuses on the impacts of global change factors —including increasing atmospheric CO 2 concentration, summer drought, nitrogen deposition, and intensified management—on the biogeochemistry and biodiversity of temperate, boreal, Mediterranean, and global forest biomes. Her work spans functional ecology of forest trees and grasslands , interactions between roots, mycorrhizal fungi and soil , ecophysiology , and long-term changes in forest ecosystems . She has made significant contributions to understanding root carbon allocation, tropical forest responses to climate change, and the role of mycorrhizal relationships in forest ecosystems. Analysis of Dr. Meier's publication record reveals a strong emphasis on belowground ecology and global change biology , with particular attention to root systems across diverse biomes. Her research bridges plant physiology, ecosystem ecology, and climate science, often synthesizing data from multiple studies to identify broader patterns. She frequently investigates how carbon allocation to root exudates affects soil sequestration and drought response, and has developed important frameworks for understanding root trait responses to multiple global change drivers. Dr. Meier actively collaborates with international research teams across continents. Her work on Nature's Contributions to People has demonstrated that securing essential ecosystem services requires maintaining at least 20-25% semi-natural habitat in human-modified landscapes. She also investigates the chemical complexity of root exudates and their ecological significance, contributing methodological advances to this challenging area of research.

Karen Alimمشاهده پروفایل

استاد

• Biological Physics
• Morphogenesis
• Non-neuronal Information Processing
• +۴ مورد دیگر

Prof. Karen Alim is a Professor of Biological Physics and Morphogenesis at the Department of Physics, Technische Universität München (TUM), affiliated with the TUM School of Natural Sciences. She holds a PhD from the Ludwig-Maximilians-Universität München (2010) and conducted postdoctoral research at Harvard University (2010–2015) before leading a Max Planck Research Group in Göttingen. Her research focuses on non-neuronal information processing in living systems, particularly using Physarum polycephalum to study physical principles of network adaptation, fluid dynamics, and morphogenesis. Education: PhD in Physics, Ludwig-Maximilians-Universität München (2010) Studies at Universität Karlsruhe, LMU München, and University of Manchester Research Interests: Prof. Alim explores how biological systems process information without neurons, emphasizing adaptive flow networks, mechanical signaling in plants, and collective behavior in active matter. Her work combines theoretical modeling with experimental systems like slime molds and plant tissues. Awards: ERC Starting Grant (2020) Elisabeth-Schiemann-Kolleg Fellowship (2013–2018) DAAD Stipendium (2011–2014) John Birks Award (2004) Advising & Grants: While specific grant details beyond the ERC award are not listed, her research has been supported by major funding bodies. No student advisees are explicitly listed in the provided materials. Labs/Teams: Leads the Biological Physics and Morphogenesis group at TUM, focusing on interdisciplinary studies of living systems' physical principles.

Jennifer L Clarkeمشاهده پروفایل

استاد

• Statistical Methodology
• Bioinformatics/Computational Biology
• Data Mining/Machine Learning
• +۳ مورد دیگر

Jennifer L. Clarke is a Professor in the Department of Statistics at the University of Nebraska–Lincoln and Director of the Quantitative Life Science Initiative. She holds leadership roles in enabling big data integration across the University of Nebraska system through collaborative research programs. Her affiliations include the Institute of Agriculture and Natural Resources (IANR) and the College of Agriculture and Natural Resources. Dr. Clarke's research focuses on statistical methodology for high-dimensional data, computational biology, bioinformatics, and bacterial genomics. Her work bridges statistical innovation with applications in oncology, microbiome analysis, and agricultural phenomics. Key areas include predictive modeling, machine learning, and genomic/metagenomic data integration. Her recent publications span cancer biomarker discovery, plant phenotyping methodologies, and microbial community analysis, reflecting her interdisciplinary approach. Articles emphasize translational applications like therapeutic target identification and precision agriculture. Dr. Clarke leads initiatives fostering collaboration between statisticians and domain scientists, including the Quantitative Life Science Initiative and contributions to the Agricultural Genome-to-Phenome Initiative (AG2PI). Her work advances data-driven solutions for healthcare and food security challenges. Notable projects include developing statistical tools for microbiome studies, analyzing root architecture via 3D imaging, and investigating cranberry-derived compounds' cancer-inhibitory mechanisms. Her methodological contributions include hybrid clustering techniques and predictive model validation frameworks.

• Climate Change Ecosystem Interactions
• Plant Ecophysiology
• Ecosystem Dynamics
• +۴ مورد دیگر

Hugo de Boer is a Professor at the Copernicus Institute of Sustainable Development , Faculty of Geosciences, Utrecht University. He serves as scientific lead for the Delta Climate Center in Vlissingen and coordinates MSc programs in Water Science and Management and Water Management for Climate Adaptation . His research explores climate-ecosystem interactions, focusing on plant ecophysiology, ecosystem dynamics, and nature-inclusive climate adaptation in deltas. Research Themes: Future Deltas, Pathways to Sustainability, Integrative Bioinformatics Projects: LEMONTREE, CloudRoots, 'From losers to winners' (ancient plant lineages under elevated CO2) Teaching Expertise: System thinking for sustainability, quantitative statistics, plant ecophysiology Research Trends emphasize interdisciplinary approaches to climate change impacts on ecosystems, with publications spanning plant-cloud processes, CO2 acclimation, and eco-evolutionary optimality models. His work bridges biogeochemistry, land-atmosphere interactions, and sustainable development frameworks. Projects & Collaborations include experimental studies on ancient plant lineages (Equisetum) and integrative field campaigns in Amazon and temperate forests. He contributes to modeling climate-vegetation feedbacks, pesticide emission scenarios, and social-ecological system transitions.

Lucas Paoliمشاهده پروفایل

پژوهشگر

• Microbiome Research
• Microbial Immunity
• Ecological Genomics
• +۴ مورد دیگر

Lucas Paoli is a Researcher and Course Instructor at École Polytechnique Fédérale de Lausanne (EPFL), Switzerland. He leads the Paoli Lab (Microbiome Immunity and Ecology) within the Global Health Institute (GHI) under the School of Life Sciences (SV). His roles include scientific collaboration and teaching responsibilities in life sciences engineering. Paoli holds a PhD in Microbiome Research from ETH Zürich (2018-2023), an M.Phil. in Environmental Policy from the University of Cambridge (2017-2018), and an M.Sc. in Ecology and Evolution from École normale supérieure (2015-2017). Research Focus: His work bridges microbial immunity and ecology, investigating how microbes defend against viral infections across ecosystems like oceans and human microbiomes. Techniques include global-scale metagenomics and functional genomics to study immune strategies and ecological interactions. Key themes involve microbial community dynamics, viral defense mechanisms, and the impact of environmental factors on microbial immunity. Lab & Education: The Paoli Lab explores microbiome-immunity interactions with a focus on ecological contexts. Paoli supervises PhD students in Life Sciences Engineering. His research outputs span microbial ecology, metagenomic tool development, and marine microbiome studies. Contact: lucas.paoli@epfl.ch, AAB 1 39, +41 21 693 16 99.

Jonathan Conwayمشاهده پروفایل

استادیار

• Plant-microbe interactions
• Biomolecular engineering
• Systems biology
• +۴ مورد دیگر

Jonathan Conway is an Assistant Professor in the Department of Chemical and Biological Engineering at Princeton University and an associated faculty member of the High Meadows Environmental Institute (HMEI). He leads the Conway Lab, which focuses on engineering plant-microbe interactions for applications in bioagriculture, bioenergy, and biochemical industries. Education: B.S. Chemical Engineering, University of Notre Dame (2011) M.S. Chemical Engineering, North Carolina State University (2013) Ph.D. Chemical Engineering, North Carolina State University (2017) Postdoctoral Fellow, University of North Carolina Chapel Hill & Howard Hughes Medical Institute (2017-2021) Research Interests: The Conway Lab develops genetic engineering approaches for non-model bacteria at plant-microbe interfaces. Key research areas include: chemical signaling between plants and microbes, microbiome impacts on plant immunity, environmental stress responses in agricultural systems, and enzymatic degradation of lignocellulosic biomass using thermophilic bacteria. The lab employs bacterial genetics, systems biology, and biomolecular engineering to create technologies for sustainable bioindustries. Publication Trends: Recent work demonstrates strong emphasis on molecular mechanisms of plant-microbe communication (2020-2024), enzyme characterization in biomass degradation (2024-2025), and development of synthetic microbial communities for climate resilience (2024). Earlier research focused on extremophile enzymology and metabolic engineering (2012-2019). Student Advising: Currently mentors 4 graduate students and 8 undergraduates. Alumni include 9 former advisees who graduated between 2022-2024. The lab actively recruits students through Princeton's Chemical Engineering graduate program and undergraduate research initiatives. Laboratory: The Conway Lab develops microfluidic systems for root microbiome studies and genetic tools for engineering plant-associated bacteria. Current projects include designing thermophilic microbial consortia for consolidated bioprocessing and characterizing bacterial immune evasion strategies.

Markus Schwarzländerمشاهده پروفایل

استاد

• Plant Mitochondrial Physiology
• Redox Biology
• Biosensor Development
• +۳ مورد دیگر

Prof. Dr. Markus Schwarzländer leads the Arbeitsgruppe for Plant Energy Biology at the Institute for Plant Biology and Biotechnology (WWU Münster) . His research focuses on mitochondrial physiology, redox signaling, and biosensor development in Arabidopsis thaliana and other plant species, integrating molecular biology with systems-level analyses to understand energy regulation. Key Research Areas: Mitochondrial-NAD(P)H dynamics Redox-regulated signaling networks Organelle communication Stress-adaptive metabolism Recent work highlights Golgi-localized mitochondrial uncoupling proteins , chloroplast-mitochondria redox coupling , and mitochondrial calcium uniporter function . His group employs cutting-edge fluorescent biosensors and proteomic approaches to dissect energy physiology. Students benefit from hands-on training in bioimaging , metabolic modeling , and organelle biology through iMoPLANT and Life Sciences programs. Scientific Awards: DAAD Fellowship (2019) As an active member of the Faculty of Biology , he collaborates with international institutions including University of São Paulo , CEA France , and Siberian Institute of Plant Physiology , while maintaining a robust publication record in top journals like Plant Cell and Nature . His teaching emphasizes integrative plant sciences and advanced biosensing techniques for B.Sc. and M.Sc. students.

Philip Pooleمشاهده پروفایل

استاد

• Nitrogen Fixation
• Plant-Microbe Interactions
• Rhizosphere Microbiology
• +۳ مورد دیگر

Philip Poole is a Professor of Plant Microbiology at the University of Oxford's Department of Plant Sciences and Senior Research Fellow at Somerville College. His research focuses on plant-microbe interactions, nitrogen fixation, and rhizosphere microbiology. He has led major international projects including the BBSRC-NSF Synthetic Symbioses program (2014-2019) and the India-UK Nitrogen Fixation Consortium (2016-2019). With 26 grants as PI from the UK's BBSRC, he has secured over £10.5 million in funding. His work includes pioneering bacterial Lux biosensors for metabolite analysis, transcriptomics under sterile conditions, and metatranscriptomics in soil to study microbiome-plant interactions. Current projects model nitrogen fixation biochemistry in legume nodules and investigate rhizobia lifecycle transitions from rhizosphere colonization to symbiotic bacteroid differentiation. He co-directs the Oxford Centre for Plants for the 21st Century and serves on editorial/advisory boards for Microbiology UK, The Journal of Bacteriology, and Pivot Bio. His contributions include elucidating the ammonia-alanine pathway for nitrogen secretion and demonstrating symbiotic auxotrophy dependencies in bacteroids. Key achievements include developing global mutagenesis strategies (INSeq) and advancing understanding of microbial community structures in the rhizosphere. His research integrates molecular, genetic, and systems biology approaches to address global challenges in sustainable agriculture.