جست‌وجوی استاد و پژوهشگر

Karoline Faustمشاهده پروفایل

دانشیار

• Microbial community dynamics
• Microbial systems biology
• Bioinformatics
• +۶ مورد دیگر

Karoline Faust is an Associate Professor at KU Leuven, affiliated with the Laboratory of Molecular Bacteriology (Rega Institute) and the Faculty of Medicine . She contributes to the iSi Health and Leuven One Health institutes, and serves on senior academic councils. Her research spans microbial systems biology, focusing on community dynamics and network analysis. Education: PhD in bioinformatics (2010, KU Leuven) Affiliations: KU Leuven, ISME Journal editorial board, Belgian Society for Microbiology Her research investigates microbial community dynamics , systems biology approaches to microbiomes, and bioinformatics tool development . She specializes in modeling human gut microbiota , synthetic microbial communities , and environmental microbiomes (e.g., microplastic impacts on Daphnia microbiomes). Her work integrates metabolic modeling , network analysis , and experimental systems to understand microbial interactions. Recent publications highlight her contributions to microbial network inference , 16S rRNA sequencing protocols , microfluidics , and ecological modeling of microbiomes. She develops tools like manta , miaSim , and CoNet to analyze community structures. Teaching: Karoline co-teaches courses in microbiology, bioinformatics, and network analysis at KU Leuven, and has contributed to international workshops on microbial network inference. Scientific Engagement: She serves as Senior Editor at ISME Journal and Secretary of the Belgian Society for Microbiology .

Amit R. Reddiمشاهده پروفایل

استاد

• Biochemistry
• Metalloproteins in biological regulation and disease
• Heme trafficking and signaling
• +۴ مورد دیگر

Amit R. Reddi is a Professor at the Department of Chemistry, Georgia Institute of Technology. His research focuses on metalloproteins, particularly the mechanisms of heme trafficking and redox signaling in relation to cancer, neurodegenerative disorders, and infectious diseases. He has received numerous awards for both research and teaching excellence. Education : B.A. from Carleton College (2003) Ph.D. from Columbia University (2008) NIH Postdoctoral Fellowship at Johns Hopkins University (2013) Research Interests : The Reddi laboratory investigates cellular mechanisms of metalloprotein activation and inter-biomolecular communication in metabolic and signaling pathways critical to human health. Key projects explore heme trafficking pathways and the role of Cu/Zn Superoxide Dismutase (SOD1) in redox signaling, with implications for cancer, neurodegenerative diseases, and microbial pathogenesis. Scientific Awards : Vasser Woolley Faculty Fellowship (2021) Student Recognition of Excellence in Teaching Class of 1934 Award (2021) CTL/BP Junior Faculty Excellence in Teaching Award (2019) Bergmann Memorial Award (2018) Blanchard Professorship (2016) NSF CAREER Award (2015) NIH NRSA Post-doctoral Fellowship (2008-2011) Grants & Fellowships : NSF CAREER Award (2015) Sigma Xi Grants-In-Aid-of-Research (2003) NIH Cancer Research Training Award Fellowship (1999-2001)

Deniz Tasdemirمشاهده پروفایل

استاد

• Marine Natural Products Chemistry
• Marine Ecology
• Biodiscovery
• +۲ مورد دیگر

Prof. Dr. Deniz Tasdemir is a Full Professor (W3) of Marine Natural Products Chemistry at GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel and serves as Director of the GEOMAR-Biotech center and Head of the Marine Natural Product Chemistry Research Unit. Her career spans institutions including the National University of Ireland Galway and UCL School of Pharmacy. PhD in Pharmacy, ETH Zurich (1997) Post-doctoral work, University of Utah (2001) Dr. Helmut Legerlotz Fellowship, University of Zurich (2002-2025) Her research focuses on marine chemical ecology , metabolomics , and bioprospecting for bioactive compounds from sponges, algae, and marine microbiomes. Recent work explores seagrass pathogen reduction, microbiome interactions, and aquafeed applications. Scientific awards include: Waters Award for Natural Products Innovation (2016) Egon Stahl Silver Medal (2005) Pierre Fabre Prize (2004) ETH Zurich Medal (1997) She leads collaborative projects on ocean sustainability and marine drug discovery, with editorial roles in Marine Drugs , Planta Medica , and Phytochemistry Letters .

Madjid Mohseniمشاهده پروفایل

استاد

• Water Quality
• Advanced Water Treatment
• Advanced Oxidation Processes
• +۶ مورد دیگر

Dr. Madjid Mohseni is a Professor in the Department of Chemical and Biological Engineering at the University of British Columbia's Faculty of Applied Science. He serves as the Scientific Director of the Community Circle on Scaling Business Innovation for Humanity with his office located in CHBE 221. Dr. Mohseni leads the Water Laboratory (http://waterlab.chbe.ubc.ca/), focusing on water quality and advanced treatment technologies for drinking water applications. Dr. Mohseni earned his Ph.D. (1998) and M.A.Sc. (1994) from the University of Toronto, and his B.Sc. from Amirkabir University of Technology in Iran. His educational background has prepared him for his current research in water treatment and environmental engineering. His research program centers on developing, evaluating, and implementing advanced oxidation processes (AOPs), particularly UV-based AOPs, ion exchange, and electrochemical processes. His laboratory conducts both laboratory-scale development and pilot-scale field evaluations at partner community sites. Current work emphasizes PFAS remediation through various approaches including advanced oxidation/reduction processes, ion exchange technologies, and electrochemical methods. He also investigates novel materials like MXenes for water purification and develops practical solutions for municipal and community water systems. Analysis of Dr. Mohseni's recent publications reveals a strong focus on emerging contaminants, particularly PFAS, with significant emphasis on UV-based treatments and vacuum UV technology. His research consistently bridges fundamental science with real-world applications, developing technologies specifically tailored for small community water systems while addressing critical water quality challenges. Dr. Mohseni maintains affiliations with the Clean Energy Research Centre and the Bioproducts Institute at UBC, demonstrating his commitment to interdisciplinary research that addresses environmental challenges through innovative engineering solutions. His work aims to advance the science behind water treatment technologies while offering communities more efficient and cost-effective solutions to protect human health and the environment.

Jennifer L Clarkeمشاهده پروفایل

استاد

• Statistical Methodology
• Bioinformatics/Computational Biology
• Data Mining/Machine Learning
• +۳ مورد دیگر

Jennifer L. Clarke is a Professor in the Department of Statistics at the University of Nebraska–Lincoln and Director of the Quantitative Life Science Initiative. She holds leadership roles in enabling big data integration across the University of Nebraska system through collaborative research programs. Her affiliations include the Institute of Agriculture and Natural Resources (IANR) and the College of Agriculture and Natural Resources. Dr. Clarke's research focuses on statistical methodology for high-dimensional data, computational biology, bioinformatics, and bacterial genomics. Her work bridges statistical innovation with applications in oncology, microbiome analysis, and agricultural phenomics. Key areas include predictive modeling, machine learning, and genomic/metagenomic data integration. Her recent publications span cancer biomarker discovery, plant phenotyping methodologies, and microbial community analysis, reflecting her interdisciplinary approach. Articles emphasize translational applications like therapeutic target identification and precision agriculture. Dr. Clarke leads initiatives fostering collaboration between statisticians and domain scientists, including the Quantitative Life Science Initiative and contributions to the Agricultural Genome-to-Phenome Initiative (AG2PI). Her work advances data-driven solutions for healthcare and food security challenges. Notable projects include developing statistical tools for microbiome studies, analyzing root architecture via 3D imaging, and investigating cranberry-derived compounds' cancer-inhibitory mechanisms. Her methodological contributions include hybrid clustering techniques and predictive model validation frameworks.

Lauren Andrewsمشاهده پروفایل

دانشیار

• Synthetic Biology
• Genome Engineering
• Metabolic Engineering
• +۵ مورد دیگر

Lauren Andrews serves as Associate Professor and Marvin and Eva Schlanger Faculty Fellow in the Department of Chemical Engineering at the University of Massachusetts Amherst. Her research integrates synthetic biology and genetic engineering to develop programmable cellular systems for biotechnological applications. Education: Postdoctoral Training: Massachusetts Institute of Technology (Biological Engineering and Broad Institute of MIT and Harvard) PhD: University of Colorado Boulder, Chemical Engineering (2012) MS: University of Colorado Boulder, Chemical Engineering (2009) BS: Cornell University, Chemical Engineering (2006) Dr. Andrews' research focuses on establishing genetic design rules for reprogramming cellular regulation and metabolism. Her lab pioneers synthetic gene networks, genetically-encoded biosensors, and high-throughput methodologies for optimizing genetic designs in both model and non-model bacteria. This work enables precise control of cellular sensing, memory, and environmental responses through multiplexed DNA assembly and next-generation sequencing. Analysis of her 15 most recent publications reveals dominant themes in bacterial biosensor development (particularly for bioremediation), quorum sensing engineering, and programmable genetic circuits for probiotic applications. Her research consistently bridges fundamental genetic circuit design with practical implementations in bacterial consortia and non-model organisms. Scientific Awards: Marvin and Eva Schlanger Faculty Fellowship NSF CAREER Award (2020) for "Programmable synthetic microbial consortia for complex multicellular functions" Her grant portfolio demonstrates significant funding for collaborative research in bacterial communication systems and model-guided design of synthetic ecosystems. The Andrews Lab maintains active partnerships with the MIT-Broad Foundry and Cold Spring Harbor Laboratory, where she co-founded the Synthetic Biology Summer Course. Current projects focus on CRISPR-based regulation in non-model bacteria and algorithmic programming of sequential logic in probiotic strains. The Andrews Lab operates within the Life Science Laboratories at UMass Amherst, utilizing advanced facilities for genetic prototyping and high-throughput screening. Her team develops multiplexed tools for exploring genetic design spaces, with particular emphasis on soil bacteria and Gram-positive pathogens for environmental and therapeutic applications.

Jennifer Smithمشاهده پروفایل

استاد

• Marine Ecology
• Coral Reef Conservation
• Benthic Ecosystems
• +۱۲ مورد دیگر

Jennifer Smith is a faculty researcher at the Scripps Institution of Oceanography, University of California, San Diego, where she leads the Smith Lab within the Center for Marine Biodiversity and Conservation. Her work focuses on coral reef ecosystems, integrating ecology with conservation, restoration, and sustainability. Her research explores how human activities such as nutrient pollution, invasive species, and climate change affect benthic marine communities. She has pioneered the use of large-area imaging and structure-from-motion technology to monitor long-term changes in Maui's coral reefs, including responses to sequential bleaching events and wildfire impacts. Her lab investigates microbial interactions with corals and the role of algae in reef degradation and resilience. Dr. Smith’s publication record reveals a strong focus on coral-algal interactions, nutrient dynamics, invasive seaweeds, and ecosystem-scale analyses. Her work spans tropical regions including Hawaii and the Great Barrier Reef, contributing to global understanding of reef resilience. She mentors graduate students and collaborates widely across marine science disciplines. Scientific Awards: No awards mentioned in the provided text. Advising and Grants: Dr. Smith advises graduate students such as Orion McCarthy and Morgan Winston. Her lab conducts long-term monitoring supported by institutional and likely federal funding, though specific grants are not listed. She leads field campaigns in Hawaii and publishes in high-impact journals. Labs and Teams: The Smith Lab is actively engaged in coral reef research, focusing on resilience, restoration, and human impacts. The team includes researchers and volunteers who conduct field surveys, analyze imagery, and produce outreach materials such as the 'Underwater Gardens' film.

Karl Griswoldمشاهده پروفایل

استاد

• Protein engineering
• Directed evolution
• Biotherapeutics
• +۲ مورد دیگر

Karl Griswold is a Professor of Engineering at Dartmouth College's Thayer School of Engineering, where he leads the Griswold Research Group focused on protein engineering and biotherapeutics development. His interdisciplinary work spans chemical, biological, and engineering disciplines to address critical challenges in drug-resistant infections and protein therapeutics. Education: BS in Chemistry from Southwest Texas State University (1995) PhD in Chemistry from the University of Texas at Austin (2005) Research Focus: Professor Griswold's laboratory specializes in protein engineering, directed evolution, and biotherapeutics development , creating novel biomolecules with superior functionality compared to natural proteins. The group develops high-throughput screening methods, protein deimmunization strategies, enhanced expression systems, and antibacterial agents targeting drug-resistant infections. Their work has significant translational potential for treating conditions like MRSA and Pseudomonas aeruginosa infections. Scientific Recognition: Wallace H. Coulter Foundation Early Career Translational Research Award in Biomedical Engineering (2008) NIH Biotechnology Training Grant (2000-2003) Royston M. Roberts - Regents Fellowship, University of Texas (1999) DOW Chemical Foundation Scholar, Texas State University (1991-1995) Senior Fellow, National Academy of Inventors Research Leadership: As co-founder and CEO of Stealth Biologics, Professor Griswold translates academic research into commercial applications. His work has secured NIH funding and Dartmouth Innovations Accelerator support, with research featured in Chemical & Engineering News, Vermont Public Radio, and the New Hampshire Union Leader for developing alternatives to traditional antibiotics. Research Environment: The Griswold Research Group maintains extensive collaborations across disciplines including clinical medicine, immunology, structural biology, and chemical engineering. This interdisciplinary approach prepares trainees for careers at the intersection of multiple scientific fields, with research focusing on Biomolecular Antimicrobial Therapies, Deimmunizing Protein Therapeutics, and Gene Library Construction Technologies.

Lucas Paoliمشاهده پروفایل

پژوهشگر

• Microbiome Research
• Microbial Immunity
• Ecological Genomics
• +۴ مورد دیگر

Lucas Paoli is a Researcher and Course Instructor at École Polytechnique Fédérale de Lausanne (EPFL), Switzerland. He leads the Paoli Lab (Microbiome Immunity and Ecology) within the Global Health Institute (GHI) under the School of Life Sciences (SV). His roles include scientific collaboration and teaching responsibilities in life sciences engineering. Paoli holds a PhD in Microbiome Research from ETH Zürich (2018-2023), an M.Phil. in Environmental Policy from the University of Cambridge (2017-2018), and an M.Sc. in Ecology and Evolution from École normale supérieure (2015-2017). Research Focus: His work bridges microbial immunity and ecology, investigating how microbes defend against viral infections across ecosystems like oceans and human microbiomes. Techniques include global-scale metagenomics and functional genomics to study immune strategies and ecological interactions. Key themes involve microbial community dynamics, viral defense mechanisms, and the impact of environmental factors on microbial immunity. Lab & Education: The Paoli Lab explores microbiome-immunity interactions with a focus on ecological contexts. Paoli supervises PhD students in Life Sciences Engineering. His research outputs span microbial ecology, metagenomic tool development, and marine microbiome studies. Contact: lucas.paoli@epfl.ch, AAB 1 39, +41 21 693 16 99.

Lawrence Goodridgeمشاهده پروفایل

استاد

• Food Safety
• Antibiotic Resistance
• Foodborne Pathogens
• +۶ مورد دیگر

Lawrence Goodridge is a Professor and Director of the Canadian Research Institute for Food Safety (CRIFS) at the University of Guelph's Ontario Agricultural College. He holds the Leung Family Professorship in Food Safety and leads research at the intersection of food safety, antibiotic resistance, and One Health principles. His work focuses on applying genomic technologies to study foodborne pathogens (E. coli, Salmonella, Listeria, Cronobacter) and leveraging wastewater surveillance for infectious disease outbreak prediction. Academic History: BSc Microbiology (University of Guelph, 1995), MSc Food Microbiology (2003), PhD Food Microbiology (2002), followed by post-doctoral training in Food Safety at the University of Georgia (2002). Joined CRIFS in 2003. Research Interests: Genomic analysis of pathogen emergence, wastewater-based epidemiology, bacteriophage applications, and consumer education strategies for food safety. His lab develops innovative methods for rapid pathogen detection in food systems and environmental samples. Articles Trends: Over 100 peer-reviewed publications emphasize genomic surveillance of foodborne pathogens and SARS-CoV-2, with a focus on wastewater sampling innovations. Recent work explores multi-modal data integration for public health forecasting and ethical data protection frameworks for surveillance programs. Awards: While no specific prizes are listed, his $50M+ research funding from Canadian/international sources underscores recognition of his impactful work. Grants support projects like phage-based sanitization and antimicrobial resistance tracking. Advising & Labs: Leads CRIFS laboratory operations and collaborates globally on food safety initiatives. His research has informed food industry guidelines and policy frameworks for mitigating pathogen risks in agricultural and environmental systems.

• Behavioral Ecology
• Evolutionary Biology
• Population Ecology
• +۱۱ مورد دیگر

Prof. Dr. Oliver Krüger is a behavioral ecologist and evolutionary biologist at Bielefeld University 's Faculty of Biology , where he leads the Department of Animal Behaviour since 2013. His research spans avian and marine mammal systems, focusing on life history strategies, parasite-host interactions, and environmental adaptation. Education: Biology studies at Bielefeld University (1994-1996) MSc in Oxford (1996-1997) PhD at Bielefeld University with Fritz Trillmich and Jan Lindström (1998-2000) Research Themes: Behavioral ecology, evolutionary biology, and population dynamics across tropical and temperate ecosystems. Key projects include NC³ (Niche Choice/Construction) and studies on Galápagos sea lions, common buzzards, and pinniped species. Scientific Leadership: Spokesperson, SFB TRR 212 "NC³" (2018-2025) Advisory Board member: German Ornithologists Union, IUCN SSC pinniped group, German Primate Centre Peer review roles: Humboldt Foundation, DFG, HFSP, NSF Awards: Leopoldina Prize (2001) Niko Tinbergen Award (2008) DFG Heisenberg Professorship (2010-2015)

Oswald J. Schmitzمشاهده پروفایل

استاد

• Biodiversity
• Ecosystem Services
• Species Interactions
• +۷ مورد دیگر

Oswald J. Schmitz is the Oastler Professor of Population and Community Ecology at the Yale University School of the Environment. His research bridges biodiversity and ecosystem services, focusing on species interactions, climate change impacts, and conservation strategies. He employs field experiments and mathematical models to study predator-herbivore-plant dynamics, nutrient cycling, and carbon sequestration. Education: B.Sc., M.Sc., University of Guelph Ph.D., University of Michigan Research areas include: Trophic rewilding for climate solutions Human-wildlife conflict dynamics Meta-ecosystem nutrient flows Animal-driven carbon cycle modifications Context-dependent conservation strategies His 2024 Bormann Prize-winning work on calving impacts in nutrient cycles and other recent publications highlight innovative ecosystem science. Schmitz mentors students like Kristy Ferraro and collaborates with alumni such as Rob Buchkowski and Julia Monk. He teaches three conservation-focused courses with an emphasis on quantitative skills and real-world applications.

• Digital Well-being
• Human-Microbe Interaction
• Neo-cybernetics
• +۷ مورد دیگر

Dominique Chen is a Professor at Waseda University's School of Culture, Media and Society since 2022, previously serving as Associate Professor from 2017-2022. A French national born in 1981, he holds a Ph.D. in Interdisciplinary Informatics from the University of Tokyo (2013). His work bridges technology, art, and human experience with a focus on digital well-being and more-than-human relationships. Chen's research interests include human-microbe interaction, neo-cybernetics, and the design of systems that foster mutual care between humans and non-human entities. His work with the Nukabot project exemplifies this interdisciplinary approach, exploring how fermentation processes can serve as metaphors for communication and relationship building. He leads the Ferment Media Research group, investigating how fermentation principles apply to digital cultures and communication systems. His recent publications reveal a consistent focus on designing for well-being in digital societies, with particular attention to translation processes, human-microbe relationships, and the creation of systems that support co-adaptive interaction. The Nukabot research series demonstrates how traditional fermentation practices can inform novel interaction paradigms that acknowledge and incorporate more-than-human perspectives. Best Paper Honorable Mention (2024) - ACM Synlogue with Aizuchi-bot ACM SIGGRAPH Special Prize (2023) - Nukabot Best of AppStore 2015/2016 - Picsee/Syncle applications Good Design Award (2008) - Creative Commons Japan Super Creator certification (2009) - IPA Exploratory IT Program Chen has advised numerous projects through his leadership of Ferment Media Research and has served on various committees including the Good Design Award jury (2016-), Yomiuri Shimbun Reading Committee, and advisory boards for art and design institutions. His work extends beyond academia through his founding of Divideal Inc. (acquired by Smart News in 2018) and Creative Commons Japan (now Commonsphere). His laboratory, Ferment Media Research, explores interdisciplinary connections between fermentation processes, digital systems, and human relationships, creating installations like Nukabot that facilitate human-microbe interaction and Last Words/TypeTrace that examines writing processes and communication.

Michael Baymمشاهده پروفایل

دانشیار

• Microbial Evolutionary Genomics
• Antibiotic Resistance
• Computational Biology
• +۷ مورد دیگر

Dr. Michael Baym is an Associate Professor of Biomedical Informatics at Harvard Medical School with affiliate appointments in Microbiology and the Laboratory of Systems Pharmacology, and as an Associate Member of the Broad Institute. He leads the Baym Lab, which studies microbial evolutionary genomics and antibiotic resistance through a hybrid of experimental, computational, and theoretical approaches. His research focuses on: Antibiotic Resistance Evolution and practical interventions Mobile Genetic Elements (plasmids, phages, transposons) Computational Genomic Algorithms for big data analysis Synthetic Biology tools and technologies Key recent publications explore phage discovery systems , phylogenetic compression of microbial genomes, and RNA-guided gene drives in plasmids. His work is supported by multiple NIH/NIGMS and NSF grants including a MIRA award. Scientific honors include: Packard Fellowship (2018) Pew Biomedical Scholarship (2020) Sloan Research Fellowship (2020) A. Clifford Barger Excellence in Mentoring Award (2021) SSQBio Mentorship Award (2022) The lab actively trains PhD students and postdoctoral fellows with alumni occupying academic and industry positions globally. Current team members include researchers from interdisciplinary backgrounds working at the intersection of experiment, computation, and theory .

Jonathan Conwayمشاهده پروفایل

استادیار

• Plant-microbe interactions
• Biomolecular engineering
• Systems biology
• +۴ مورد دیگر

Jonathan Conway is an Assistant Professor in the Department of Chemical and Biological Engineering at Princeton University and an associated faculty member of the High Meadows Environmental Institute (HMEI). He leads the Conway Lab, which focuses on engineering plant-microbe interactions for applications in bioagriculture, bioenergy, and biochemical industries. Education: B.S. Chemical Engineering, University of Notre Dame (2011) M.S. Chemical Engineering, North Carolina State University (2013) Ph.D. Chemical Engineering, North Carolina State University (2017) Postdoctoral Fellow, University of North Carolina Chapel Hill & Howard Hughes Medical Institute (2017-2021) Research Interests: The Conway Lab develops genetic engineering approaches for non-model bacteria at plant-microbe interfaces. Key research areas include: chemical signaling between plants and microbes, microbiome impacts on plant immunity, environmental stress responses in agricultural systems, and enzymatic degradation of lignocellulosic biomass using thermophilic bacteria. The lab employs bacterial genetics, systems biology, and biomolecular engineering to create technologies for sustainable bioindustries. Publication Trends: Recent work demonstrates strong emphasis on molecular mechanisms of plant-microbe communication (2020-2024), enzyme characterization in biomass degradation (2024-2025), and development of synthetic microbial communities for climate resilience (2024). Earlier research focused on extremophile enzymology and metabolic engineering (2012-2019). Student Advising: Currently mentors 4 graduate students and 8 undergraduates. Alumni include 9 former advisees who graduated between 2022-2024. The lab actively recruits students through Princeton's Chemical Engineering graduate program and undergraduate research initiatives. Laboratory: The Conway Lab develops microfluidic systems for root microbiome studies and genetic tools for engineering plant-associated bacteria. Current projects include designing thermophilic microbial consortia for consolidated bioprocessing and characterizing bacterial immune evasion strategies.