جست‌وجوی استاد و پژوهشگر

Harris H. Wangمشاهده پروفایل

دانشیار

• Systems Biology
• Synthetic Biology
• Genome Engineering
• +۱۷ مورد دیگر

Harris H. Wang is an Associate Professor in the Department of Systems Biology and Department of Pathology and Cell Biology at Columbia University's Vagelos College of Physicians and Surgeons, where he also serves as Interim Chair of Systems Biology. He is affiliated with the Center for Computational Biology and Bioinformatics (C2B2) and the Integrated Program in Cellular, Molecular and Biomedical Studies (CMBS). B.S., Physics and Mathematics, MIT Ph.D., Biophysics, Harvard University Dr. Wang's research lies at the intersection of systems and synthetic biology, focusing on developing foundational technologies for genome engineering, microbiome manipulation, and synthetic genomics. His lab pioneers methods such as MAGE, MAGIC, CAST, and CAMII to enable high-throughput genetic manipulation, in situ microbiome engineering, and AI-driven microbial culturomics. Key research themes include understanding microbial community dynamics, engineering cellular memory systems, designing biocontained genetic circuits, and applying synthetic biology to human health challenges in personalized medicine and infectious disease. His recent publications reveal a strong trend in spatial and functional metagenomics, CRISPR-based microbiome editing, and synthetic biology tools for data storage and genetic stability. The articles span high-impact journals like Nature , Science , and Nature Biotechnology , reflecting his leadership in developing scalable, programmable biological systems. Scientific Awards: NIH Director’s Early Independence Award Forbes 30 Under 30 in Science Sloan Research Fellowship NSF CAREER Award ONR Young Investigator Award Burroughs Wellcome Fund PATH Award Schaefer Scholar Blavatnik National Award Vilcek Prize PECASE Dr. Wang has advised numerous PhD and postdoctoral researchers, many of whom have gone on to independent scientific careers. His lab is supported by major grants from NIH, NSF, DARPA, DOE, and foundations including the Bill & Melinda Gates Foundation and CZ Biohub NY. He is actively involved in educational initiatives, including organizing Columbia’s iGEM team and the Cold Spring Harbor Laboratory Synthetic Biology course. The Wang Lab is based at the Columbia University Irving Medical Center and is part of national consortia such as the Engineering Biology Research Consortium (EBRC) and the Genome Project-Write (GP-Write) initiative. The lab develops and applies cutting-edge technologies in automation, machine learning, and synthetic biology to engineer microbiomes for applications in medicine, global health, and climate change.

Praneet Prakashمشاهده پروفایل

پژوهشگر

• Biophysics
• Soft Matter Physics
• Statistical Mechanics
• +۳ مورد دیگر

Dr. Praneet Prakash is a Researcher in the Department of Applied Mathematics and Theoretical Physics at the University of Cambridge, working under Prof. Raymond Goldstein. His research focuses on interdisciplinary approaches combining microfluidics, microscopy, and theoretical physics to study biological systems. Key areas include microbial motility, active matter dynamics, and the interplay between physics and living systems. He utilizes experimental techniques such as microfluidics and advanced microscopy to investigate phenomena like bacterial swimming, nutrient exchange in microbial communities, and growth oscillations in filamentous fungi. His work bridges Soft Matter Physics, Statistical Mechanics, and Biophysics, with applications ranging from understanding microorganism behavior to developing biosensor technologies. Recent studies explore phototactic algae behavior, ciliary surface interactions in animalcules, and adaptive motility in marine microorganisms. Publications highlight contributions to microbial ecology, active matter systems, and biophysical modeling. While no formal awards are listed, his research has been published in high-impact journals like Journal of the Royal Society Interface and Physical Review Fluids . He is affiliated with the Biological Physics and Mechanics research group and maintains an active presence on academic platforms like Twitter and LinkedIn.

• Synthetic Biology
• Systems Biology
• Quantitative Biology
• +۵ مورد دیگر

Ting Lu is an Associate Professor at the University of Illinois at Urbana-Champaign in the School of Biomedical and Translational Sciences, focusing on microbial synthetic biology and systems biology. Their research bridges biology, engineering, and physics to reprogram cellular functionalities through gene regulatory networks. Ph.D. in Biophysics, University of California at San Diego (2007) B.S. in Physics, Zhejiang University (2002) Ting Lu's work explores microbial ecosystems, synthetic gene circuits, and their applications in biotechnology and medicine. By combining experimental approaches with mathematical modeling, they investigate bacterial communication networks, metabolic pathways, and spatial dynamics in microbial communities. Selected research trends include microbial consortia engineering for bioremediation and bioproduction, complexity reduction in microbiomes, and predictive modeling of synthetic gene networks. Their publications span high-impact journals such as Nature Communications , Nature Chemical Biology , and eLife . Fellow, American Institute for Medical and Biological Engineering (2022) Future Insight Prize (2021) Donald Biggar Willett Faculty Scholar (UIUC) (2020) NIH Maximizing Investigators' Research Award (2019) NSF CAREER Award (2015) AHA National Scientist Development Grant (2012) Ting Lu's lab has received grants from NIH, NSF, ONR, and industry partners. They offer undergraduate research opportunities in synthetic and systems biology, and teach advanced courses such as BIOE 430 - Intro Synthetic Biology and BIOE 432 - Systems Biology .

Michael McAlpineمشاهده پروفایل

استاد

• 3D Printing
• Nanotechnology
• Biomedical Engineering
• +۴ مورد دیگر

Michael McAlpine is a Professor in the Mechanical Engineering department at the University of Minnesota . He also holds affiliations with the Biomedical Engineering and Electrical and Computer Engineering departments. His research focuses on 3D printing functional materials & devices , Nanoscale inks , Biomedical devices , Bioelectronics , and Flexible Microsystems . Research Interests : 3D Printing, Biomedical Engineering, Nanotechnology, Flexible Electronics, Microfluidics Labs : ME 361/363 Contact : mcalpine@umn.edu , (612) 626-3303, ME 117 Recent Research Trends include 3D Printed Biomedical Devices , Flexible Electronics , and Bioprinting Applications . His work spans from Spinal Organoid Formation to Programmable Drug Release Capsules . Scientific Award : Circulation Research 2020 Best Manuscript Award

Robert J. Hamersمشاهده پروفایل

استاد

• Electrochemistry
• Nanotechnology
• Materials Science
• +۹ مورد دیگر

Robert J. Hamers is a Professor of Chemistry and the Steenbock Professor of Physical Science at the University of Wisconsin-Madison . He serves as the Director of the Center for Sustainable Nanotechnology , a multi-institutional collaboration, and is a Senior Editor for Accounts of Chemical Research . Additionally, he co-founded the startup Silatronix, Inc. and leads the ACS/UW-Madison Bridge to the Chemistry Doctorate Program . B.S. in Chemistry, University of Wisconsin-Madison (1980) Ph.D. in Chemistry, Cornell University (1986) Hamers' research focuses on surface chemistry, nanotechnology, and renewable energy , with specific interests in electrochemical energy storage, photoelectron emission mechanisms, and environmental impacts of nanomaterials . His group develops ultra-stable surface chemistries for energy devices and investigates charge-transfer processes at material interfaces . Recent publications highlight advances in diamond-based materials , organosilicon electrolyte additives , and environmental fate of nanomaterials . Scientific recognitions include the Wisconsin Distinguished Professor title. His work bridges fundamental surface science with applied technologies through collaborations with academic institutions, national laboratories, and industry partners like Dow Chemical . The Hamers Group actively trains graduate students and postdoctoral researchers in multidisciplinary approaches.

Gabriel Birzuمشاهده پروفایل

استادیار

• Microbial Ecology
• Evolutionary Dynamics
• Population Genetics
• +۳ مورد دیگر

Gabriel Birzu is an Assistant Professor in the Department of Physics at the University of Florida. He develops quantitative models of microbial ecology and evolution using statistical physics approaches. His research investigates fine-scale diversity in microbial communities, examining how spatial processes shape evolutionary trajectories. Recent work analyzes hybridization barriers in cyanobacteria and genealogical patterns during range expansions. Birzu's interdisciplinary approach combines theory, computation, and data analysis to understand microbial diversification mechanisms and community responses to environmental perturbations.

Michele Klingbeilمشاهده پروفایل

استاد

• Parasitology
• Molecular Biology
• Microbiology
• +۴ مورد دیگر

Michele Klingbeil is a Professor in the Department of Microbiology at the University of Massachusetts Amherst, where she leads the Klingbeil DNA Replication Laboratory. She received her PhD in Cell and Molecular Biology from the University of Toledo in 1996 and previously worked at Johns Hopkins School of Medicine before moving to UMass in July 2007. Her educational background includes: PhD in Cell and Molecular Biology, University of Toledo, 1996 Dr. Klingbeil's research focuses on the unique biology of trypanosomatid parasites, particularly Trypanosoma brucei , the causative agent of African sleeping sickness. Her laboratory investigates two main areas: (1) replication of the unusual mitochondrial DNA network called kinetoplast DNA (kDNA), and (2) nuclear DNA replication initiation. Her work on kDNA is particularly significant as this structure is essential for parasite survival but has no counterpart in mammalian hosts, making it an attractive drug target. She employs a combination of reverse genetics (RNAi), cell biology, and biochemistry to understand the replication and repair mechanisms of kDNA, with a special focus on a family of four DNA polymerases related to bacterial Pol I. Dr. Klingbeil's recent publications reveal her laboratory's deep investigation into mitochondrial DNA polymerases in trypanosomatids, with discoveries showing multiple polymerases having specialized functions in kDNA replication and repair. Her research has established that several of these polymerases are essential for parasite viability, opening new avenues for drug development. She has also made significant contributions to understanding the simplified Origin Recognition Complex in trypanosomatids compared to other eukaryotes. Dr. Klingbeil has received the Thomas G. Lessie Distinguished Lectureship Award for her impact on teaching at the graduate level. Her research is funded by the National Institutes of Health, U.S. Department of Agriculture, the Joeph P. Healey Endowment, and the University of Massachusetts Amherst. She has mentored numerous graduate and undergraduate students, including current PhD candidates Dave Bruhn, Jeniffer Concepción, and Juemin Luo, as well as visiting scholar Eva Vidal Rico. Her former students have gone on to positions at institutions including Dana Farber/Broad Institute, Regis College, and Flagship Ventures. The laboratory regularly participates in scientific conferences including the Molecular Parasitology Meeting at Woods Hole and the Kinetoplastid Molecular Cell Biology conference. Dr. Klingbeil teaches several courses including Parasitology (MICRO 590S), Parasitology Lab (MICRO 590L), Molecular Mechanisms of Pathogenesis (MICRO 797P), Advanced Cell Biology (MCB 641), and Writing in Microbiology (MICRO 360). Her laboratory organizes regular social events including pumpkin carving parties and outings to Six Flags New England and Mt. Sugarloaf.

Knut Drescherمشاهده پروفایل

دانشیار

• Bacterial Biofilms
• Microbial Multicellularity
• Biophysics
• +۵ مورد دیگر

Prof. Knut Drescher is an Associate Professor at the Biozentrum, University of Basel , leading a research group focused on bacterial biofilms , swarming , and microbial multicellularity . Previously, he served as a Professor of Biophysics and Max Planck Research Group Leader at Philipps-Universität Marburg (2015-2021) and conducted postdoctoral research at Princeton University. Research Interests: Physical and biological mechanisms of biofilm formation Cell-cell interactions in microbial communities Antibiotic resistance in biofilms Hydrodynamics of bacterial swarms Evolution of cooperation in multispecies biofilms Development of bioimaging software (BiofilmQ, BacStalk) Scientific Awards: 2023: SNSF Consolidator Grant 2019: Heinz Maier-Leibnitz Prize (DFG), VAAM Research Prize, IUPAP Young Scientist Prize 2016: ERC Starting Grant Advising & Grants: Advises PhD and Master's students in microbiology, biophysics, and bioinformatics Secured major grants from ERC , HFSP , and DFG

• Virology
• Molecular Biology
• Genomics
• +۶ مورد دیگر

James Van Etten is the William Allington Distinguished Professor of Plant Pathology at the University of Nebraska-Lincoln, affiliated with the School of Biological Sciences and Nebraska Center for Virology. His research focuses on chloroviruses—large dsDNA viruses infecting Chlorella-like algae—with emphasis on DNA replication, restriction systems, and membrane transport proteins. Key research themes include: Viral DNA modification systems Host-virus interactions Structural virology Evolution of organellar genomes Recent work analyzed: SMRT sequencing of viral methylation patterns Chlorovirus cryopreservation methods Potassium channel biophysics Host chemical signaling mechanisms Lab webpage: vanettenlab.unl.edu

Rebecca Willettمشاهده پروفایل

استاد

• Machine Learning
• Signal Processing
• Data Science
• +۳ مورد دیگر

Rebecca Willett is a Professor of Statistics and Computer Science at the University of Chicago and Faculty Director of AI at the Data Science Institute. She holds the Worah Family Professorship and is a member of the Wallman Society of Fellows. Her research focuses on machine learning, signal processing, and scientific computing, with applications in astronomy, climate science, and biochemistry. She has held visiting roles at institutions including UCLA and INRIA. Key roles include Deputy Directorships at the NSF-Simons Institute for Theory and Mathematics in Biology and the SkAI Institute. Education: PhD in Electrical and Computer Engineering from Rice University (2005), followed by faculty roles at Duke University (2005–2013) and the University of Wisconsin-Madison (2013–2018). Awards include the 2024 SIAM Data Science Career Award, NSF CAREER Award (2007), and AFOSR Young Investigator Award (2010). Research interests span inverse problems, optimization theory, and interdisciplinary applications. Her work bridges high-dimensional statistics and imaging science. Recent articles emphasize neural network theory, climate data assimilation, and biophysical modeling. Awards include SIAM Fellowship, IEEE Fellowship, and teaching excellence awards. She leads initiatives in AI ethics, broadening participation in STEM, and serves on key committees like the National Academies' CATS. Labs/Groups: Machine Learning Group at UChicago, CERES Center for Unstoppable Computing. Grants include NSF, DOE, and collaborations with Argonne National Laboratory.

Waldemar Kolanusمشاهده پروفایل

استاد

• Molecular Immunology
• Cell Signaling
• Signal Transduction Pathways
• +۴ مورد دیگر

Prof. Waldemar Kolanus leads the Molecular Immunology and Cell Biology department at the University of Bonn's Life & Medical Sciences Institute (LIMES) . His research bridges immunoregulation , stem cell dynamics , and metabolic stress responses in immune cells. Unit 2 member at LIMES Principal investigator in SFB 704 and ImmunoSensation Cluster Leads a multidisciplinary lab with postdocs, PhD students, and technical staff His work focuses on intracellular signaling pathways connecting immune activation to tissue homeostasis, particularly through: Cytohesin proteins in integrin-mediated adhesion and migration TRIM71 in stem cell regulation and congenital hydrocephalus High-salt environments affecting macrophage function Publication trends show expertise in immune cell migration , genetic models , and chemical inhibition , with frequent use of mice and zebrafish for in vivo studies. Key articles explore: TRIM71's dual role in auditory development and germ cell maintenance Cytohesin family's Golgi regulation and insulin signaling Ruxolitinib's off-target migration inhibition of dendritic cells Contact details: Address: LIMES Institute, Carl-Troll-Straße 31, Bonn Email: kolanus.sekretariat@uni-bonn.de Phone: +49 228 73-62788

Kesen Maمشاهده پروفایل

دانشیار

• Microbiology
• Biochemistry and enzymology
• Protein purification and analysis
• +۹ مورد دیگر

Kesen Ma is an Associate Professor and Undergraduate Advisor in Biology at the University of Waterloo, specializing in hyperthermophile physiology and enzymology. His research explores metabolic processes at extreme temperatures for biofuel production, with affiliations at the Centre for Bioengineering and Biotechnology and Waterloo Centre for Microbial Research. His educational background includes: Ph.D. in Microbial Biochemistry from Philipps-Universität Marburg, Germany (1989) M.Sc. in Microbiology from Academia Sinica, Taiwan (1984) B.Sc. in Microbiology from Wuhan University, China (1982) Dr. Ma's research spans Microbiology , Biochemistry , and Renewable Energy , focusing on protein thermostability, novel metabolic pathways in extremophiles, and industrial applications of thermostable enzymes. His work bridges fundamental enzymology with practical biocatalysis for pharmaceutical and biofuel industries. Analysis of his 2017-2024 publications reveals consistent focus on alcohol dehydrogenases and pyruvate decarboxylases from thermophiles, emphasizing enzyme characterization, thermostability mechanisms, and high-temperature fermentation systems for ethanol production. His scientific recognition includes: Research Fellow at Max-Planck Institute, Philipps-Universität Marburg (1985) Graduate Scholarship from Academia Sinica, Beijing (1982) As Undergraduate Advisor for Biology, Dr. Ma mentors students while leading patented research on thermostable biocatalysts (US patent 8476051). His work has direct industrial applications in bioethanol production and stereo-specific compound synthesis. He actively collaborates through the Waterloo Centre for Microbial Research, focusing on extremophile enzymology for sustainable bioprocessing solutions.

Atul N. Parikhمشاهده پروفایل

استاد

• Biophysical mechanisms
• Bio-inspired materials
• Membranes and vesicles
• +۵ مورد دیگر

Atul N. Parikh is a Professor in the Departments of Biomedical Engineering and Materials Science and Engineering at the University of California Davis. His work bridges physical and biological sciences, focusing on understanding cellular mechanisms and designing bio-inspired synthetic materials. Key research areas include membrane dynamics, phase separation in vesicles, and the creation of synthetic protocells to explore life's fundamental processes. Education details are not explicitly provided in the text. His research emphasizes far-from-equilibrium systems and non-equilibrium self-assembly, aiming to develop materials capable of complex functions like memory and self-repair. Recent studies explore lipid phase separation, osmotic stress responses, and surfactant-mediated membrane modulations. Notable projects include the development of lipid nanoconstructs for drug delivery, osmo-regulated vesicle systems, and understanding microbial membrane interactions. His work has applications in biomedical engineering, material science, and synthetic biology. Lab activities focus on experimental approaches combining microscopy, biophysical characterization, and synthetic material fabrication. Collaborative efforts involve interdisciplinary teams addressing challenges in membrane biology and functional materials design.

Thomas R Powersمشاهده پروفایل

استاد

• Soft Matter
• Fluid Mechanics
• Biophysics
• +۵ مورد دیگر

Thomas R Powers is a Professor of Engineering and Professor of Physics at Brown University. He joined Brown in 2000 as the first holder of the James R. Rice Term Chair in Solid Mechanics and has been an influential figure in soft matter physics, biomechanics, and microorganism locomotion. PhD in Physics, University of Pennsylvania (1995) BS in Physics and Mathematics, MIT (1989) His research focuses on soft matter systems, including colloidal and lipid bilayer membranes, liquid crystals, and active matter, with an emphasis on low-Reynolds-number hydrodynamics and geometric mechanics. His work has been supported by NSF grants, including collaborations with Brandeis University's bioinspired materials center. Recent publications explore microbial flagellar dynamics (e.g., Giardia lamblia ), chiral membrane behavior, and active gel responses to shear. Key keywords include soft matter, active matter, fluid mechanics, and microscale locomotion. Scientific honors include: Fellow, American Physical Society NSF CAREER Award (2001-2006) T. Francis Ogilvie Young Investigator Lectureship, MIT Ocean Engineering He has advised numerous students through courses like ENGN 2912F (Soft Matter) and ENGN 1210 (Biomechanics), while leading funded research on colloidal membranes and viscoelastic fluid interactions.

• Multiscale Modeling
• Multiphysics Modeling
• Biophysics
• +۷ مورد دیگر

Dr. Igor V. Pivkin is a Full Professor at the Institute of Computing within the Faculty of Informatics at the Università della Svizzera italiana (USI) in Lugano, Switzerland. His academic journey includes degrees from Novosibirsk State University (B.Sc./M.Sc. Mathematics), Brown University (M.Sc. Computer Science and Ph.D. Applied Mathematics), and postdoctoral research at MIT's Department of Materials Science and Engineering. His research focuses on multiscale/multiphysics modeling , numerical methods , and large-scale simulations of biological and physical systems. Key areas include biophysics, cellular/molecular biomechanics, stochastic modeling, and coarse-grained molecular simulations. He leverages high-performance computing (HPC) and particle-based methods to address complex biological phenomena. His work spans diverse applications, from understanding cellular mechanosensitivity and biofilm engineering to modeling cancer cell behavior and red blood cell dynamics in the spleen. His contributions bridge computational science, biotechnology, and biomedical research. He has published extensively in top-tier journals, with recent work advancing automated biofilm analysis, deep learning for microbial classification, and systems biology approaches to metal bioleaching. His lab collaborates on interdisciplinary projects, emphasizing computational innovation for real-world biological challenges.