جست‌وجوی استاد و پژوهشگر

Stephen Leveneمشاهده پروفایل

استاد

• DNA topology
• protein-DNA interactions
• nucleic acid structure
• +۵ مورد دیگر

Stephen Levene is a Professor of Bioengineering at The University of Texas at Dallas (UT Dallas), affiliated with the Erik Jonsson School of Engineering and Computer Science. His research focuses on the physical and functional genomics of DNA structure, protein-DNA interactions, and DNA topology in biological systems. He holds a PhD from Yale University (1985) and an AB from Columbia University (1979). Levene’s laboratory investigates genome organization, chromatin dynamics, and the role of circular DNA (eccDNA) in health and disease. His work employs advanced biophysical techniques, including hydroxyl radical probing, gel electrophoresis, and single-molecule analysis. Key areas include DNA supercoiling, topoisomerase function, and the interplay between DNA structure and cellular processes. His research has led to innovations in DNA topology simplification, Cre recombination kinetics, and methodologies for analyzing circular DNA populations in organisms like C. elegans and humans. Levene’s lab also develops tools for genomic studies, such as shallow-learning models for DNA fragmentation analysis and unmasking hidden topological activities in recombination systems. Levene’s contributions span over 40 years, with publications addressing DNA looping, knotting, and the thermodynamics of nucleoprotein assemblies. His work bridges biophysics, molecular biology, and engineering, emphasizing interdisciplinary approaches to genomic challenges.

Norbert O. Reichمشاهده پروفایل

استاد

• Materials Chemistry
• Biochemistry & Biophysics
• Biomedical Sciences
• +۵ مورد دیگر

Norbert O. Reich is a Distinguished Professor in the Department of Chemistry & Biochemistry at the University of California, Santa Barbara (UCSB), affiliated with the College of Letters and Science. He joined UCSB in 1987 after completing his Ph.D. at UCSF in 1984 and an NIH postdoctoral fellowship there. His research focuses on enzyme mechanisms, particularly DNA methylation and telomerase, with applications in antibiotic and cancer therapy design. He also develops innovative chemical biology tools, including gold nanoshell-based drug delivery systems and fluorescence-based protein tracking methods. Education: Ph.D. in Chemistry from UCSF (1984). Awards: Regent's Junior Faculty Fellowship (1987), American Cancer Society Faculty Research Award (1991), UC President's Award for Excellence in Undergraduate Research (1994). Research Interests: Epigenetic regulation via DNA methylation in bacteria and mammals Enzyme mechanisms of DNA methyltransferases (e.g., DNMT3A, CcrM) Design of therapeutic inhibitors targeting epigenetic enzymes Light-controlled delivery of proteins/RNA via gold nanoshells Protein-DNA interaction analysis using microfluidic arrays Awards and Recognition: His honors reflect contributions to both research and education, emphasizing his dual impact in science and teaching. Lab and Collaborations: Leads the Reich Lab, collaborating with researchers like Tom Pettus (UCSB) and Erkki Ruoslahti. Projects include antibiotic development, cancer epigenetics, and nanotechnology-driven drug delivery. Future Work: Expanding applications of nanoshell technology for targeted gene silencing and exploring allosteric inhibitors of DNMT3A for cancer treatment.

• DNA Nanotechnology
• Molecular Robotics
• Self-Assembling Nanostructures
• +۴ مورد دیگر

Dr. Shelley Wickham is an Associate Professor and ARC DECRA Fellow at the University of Sydney, holding joint appointments in the Schools of Chemistry and Physics. She serves as a Westpac Research Fellow and leads the DNA Nanotechnology Group at the Sydney Nano Institute. Dr. Wickham is also co-Champion of the Sydney Nano Institute Grand Challenge project in Molecular Nanorobotics for Health, co-lead of the School of Physics Grand Challenge on Nanoscale brain navigation for targeted drug delivery, and faculty mentor of the University of Sydney BIOMOD team. Bachelor of Science and Master of Science in Physics from University of Sydney PhD in Condensed Matter Physics from University of Oxford Postdoctoral Fellow at Harvard Medical School, Dana-Farber Cancer Institute, and Wyss Institute Dr. Wickham's research focuses on self-assembling nanotechnology and molecular robotics, particularly in the design and assembly of programmable nanostructures out of DNA. Her work spans applications in cell biology, materials science, and nanomedicine. Current research projects include design and synthesis of self-assembling DNA nanostructures, proto-cells made of DNA gels that move under flow, new plasma fabrication methods for biomolecule micropatterning, and DNA computation circuits for navigating the brain using machine learning. Her research aligns with the Faculty of Science Research Strengths in Molecules to Materials, Preventing and Treating Disease & Disorder, and Next Generation Materials. Analysis of Dr. Wickham's recent publications reveals a consistent focus on DNA nanotechnology with increasing sophistication in structural complexity and biological applications. Her work has evolved from fundamental DNA origami structures to increasingly complex multi-component systems with practical applications in nanomedicine and biomimetic engineering. Recent publications show strong interdisciplinary collaboration across chemistry, physics, biology, and engineering disciplines, with emphasis on real-world applications including drug delivery systems and biomolecular sensors. ARC DECRA Fellow Westpac Research Fellow BIOMOD World Champions (2019) Dr. Wickham actively mentors PhD students and postdoctoral researchers in her DNA nanotechnology group. She has secured significant research funding including ARC Discovery Projects, Westpac Scholarships, and NSW Health grants. Her current grants support projects such as '3D Bio-Nanomaterial Displays with Designer Architectures and Functions' and 'RNA aptamer sensing devices for rapid detection of blood clotting.' Dr. Wickham encourages applications from diverse backgrounds and maintains active collaborations with researchers at Harvard, Oxford, and other international institutions. Dr. Wickham leads the DNA Nanotechnology Group at the University of Sydney, which is part of the Sydney Nano Institute. Her lab focuses on building tools from DNA origami - including tweezers, spanners, wrenches and springs - to better understand biological processes at the nanoscale. The group has achieved notable success with the BIOMOD team winning world championships in 2019, and continues to develop innovative approaches to molecular robotics for healthcare applications.

PJ Lambersonمشاهده پروفایل

دانشیار

• Social Networks
• Collective Intelligence
• Contagion Dynamics
• +۳ مورد دیگر

PJ Lamberson is an Associate Professor in the Communication Department at the University of California, Los Angeles (UCLA), serving as departmental Vice Chair and Director of Graduate Studies since 2023. He holds a Ph.D. in Mathematics from Columbia University (2006) and has held prior faculty positions at MIT Sloan School of Management and the Kellogg School of Management, where he also served as Associate Director of the Northwestern Institute on Complex Systems (NICO). His research focuses on social influence, networks, and collective intelligence, with interdisciplinary applications in political science, epidemiology, and computational social science. **Education**: B.A. Mathematics (University of Chicago, 2001), M.A., M.Phil., and Ph.D. in Mathematics (Columbia University, 2003–2006). He has received funding from NIH, UCLA, and other institutions for projects like "Team Dynamics, Networks, and Assembly (Team DNA)" ($1.7M) and "Network Games with Local Correlation and Clustering" ($5K). **Research Interests**: Explores how individual interactions aggregate into collective outcomes, including social contagion, network structures, and hybrid predictive systems. Recent work addresses voter turnout dynamics, obesity prevention via agent-based models, and optimal networks for problem-solving. **Awards**: IC2S2 Best Paper Award (2021), multiple Faculty Impact Awards (2013–2014), and recognition for contributions to teaching and interdisciplinary research. **Teaching**: Offers courses like Computational Communication (PhD), Social Networking (undergraduate), and Methodologies of Communication Research. Supervised over a dozen PhD and master’s students, including Gülşah Akçakır and Seonhye Noh. **Professional Roles**: Associate Editor of *System Dynamics Review*, contributor to international conferences, and frequent speaker on topics like computational social science and network theory.

• Colloidal Science
• Self-Assembly
• Materials Science
• +۵ مورد دیگر

Vinothan N. Manoharan is a Professor in the School of Engineering and Applied Sciences and the Department of Physics at Harvard University. He joined Harvard in 2005 after a postdoctoral fellowship at the University of Pennsylvania and a PhD in Chemical Engineering at the University of California, Santa Barbara. His research bridges colloidal science, biophysics, and materials engineering, focusing on self-assembly processes and advanced imaging techniques.

Daniela Strenkertمشاهده پروفایل

استادیار

• Plant Biology
• Systems Biology
• Molecular Biology
• +۱۲ مورد دیگر

Daniela Strenkert is an Assistant Professor at Michigan State University, affiliated with the MSU-DOE Plant Research Laboratory, Plant Biology Department, Molecular Plant Sciences Program, BioMolecular Science Gateway, and Cell & Molecular Biology Program. Her research focuses on systems biology approaches to understand gene regulation in photosynthetic organisms. Ph.D., University of Kaiserslautern, Germany Her lab investigates photosynthetic performance through multi-omics analysis of chromatin structure, transcriptomes, proteomes, and metabolomes in Chlamydomonas reinhardtii . Key areas include environmental acclimation, histone modification mapping (GreENCODE project), and regulatory RNA characterization. Recent publications emphasize computational modeling of photosynthetic protein interactions, metal homeostasis under stress, and chloroplast protein import mechanisms. Articles span 2025-2010, with 15 most recent from 2025-2022. Her work integrates genome-wide datasets to decode algal regulatory programs under climate change-relevant stressors. She teaches BS 161: Cells and Molecules and maintains a lab at 106 Plant Biology Lab. Contact: strenke2@msu.edu .

Jeremy Baumbergمشاهده پروفایل

استاد

• Nanoscience
• Nanotechnology
• Nanophotonics
• +۶ مورد دیگر

Jeremy Baumberg is a Professor at the Cavendish Laboratory, University of Cambridge, leading research in nanoscience and nanotechnology. He specializes in designing nano-materials with unique optical properties, including plasmonic cavities and polymer opals, with applications in catalysis, sensing, and energy. His work bridges academia and industry through collaborations with Hitachi, IBM, and his spin-offs Mesophotonics and Base4. Research interests focus on light-matter interaction in nanoscale systems, quantum plasmonics, surface-enhanced Raman spectroscopy (SERS), and nanocavity engineering. Recent projects include developing plasmonic nanogap reactors, high-energy-density battery materials, and the open-source WaterScope platform for water quality monitoring. Awards : Faraday Medal (2017) Rumford Medal (2014) Young Medal (2013) Royal Society Fellowship (2011) Mullard Prize (2005) His lab, the Ray Dolby Centre, explores optomechanical systems, plasmonic sensors, and nanostructured materials. Baumberg advises ARIA and serves on the EPSRC Council, emphasizing interdisciplinary innovation and scalable nanotechnology solutions.

• Evolutionary Biology
• Genetics
• Zoology
• +۹ مورد دیگر

Alfried Vogler is a Professor of Molecular Systematics with a joint appointment at Imperial College London's Department of Life Sciences (Silwood Park) and the Natural History Museum, London. His research focuses on the evolutionary and genetic mechanisms underlying insect biodiversity, particularly in beetles (Coleoptera), using advanced genomic techniques like metagenomics and environmental DNA (eDNA). He has held academic positions since 1995, becoming a Full Professor in 2006. Vogler is affiliated with the Georgina Mace Centre for the Living Planet, the Grantham Institute, and the Microbiome Network, contributing to interdisciplinary projects in ecology and conservation. Education: PhD in Bacterial Genetics (1988), University of Osnabrück, Germany MSc in Taxonomy and Biodiversity Biology degree (1984), University of Regensburg, Germany Research Interests: Vogler combines phylogenetics, population genomics, and bioinformatics to study species diversity across hierarchical levels (populations to insect orders). He explores community dynamics in complex environments, including tropical rainforests and soil ecosystems, using cutting-edge methods like metabarcoding and qPCR. His work emphasizes understanding trait evolution, dispersal constraints, and ecological interactions in biodiversity hotspots. Recent projects investigate the role of mitochondrial metagenomics in reconstructing evolutionary histories and predicting climate change impacts on communities. Academic Leadership: Since 1996, Vogler has directed the MSc in Taxonomy and Biodiversity and the MRes in Biosystematics programs, overseeing academic content and student research supervision. He also contributes to the Biodiversity, Evolution and Conservation MRes (UCL/NHM) and has been a module organizer for courses like Tree-of-Life and molecular systematics. Labs & Collaborations: Vogler leads the Molecular Systematics research group at the Natural History Museum, collaborating with Imperial College's Silwood Park campus. His work integrates with the SITE-100 project, aiming to build a global genomic framework for biodiversity synthesis. He also participates in DNAqua-Net, advancing genetic tools for aquatic ecosystem assessment.

Steven Corcelliمشاهده پروفایل

استاد

• Theoretical Chemistry
• Computational Chemistry
• Biophysical Chemistry
• +۷ مورد دیگر

Steven Corcelli is a Professor and Interim Dean of the College of Science at the University of Notre Dame, with a joint appointment in the Department of Chemistry and Biochemistry. He has held key leadership roles including Department Chair (2022–2025) and Associate Dean for Interdisciplinary Studies (2019–2022). His research is centered in the Computational Molecular Science & Engineering Laboratory (CoMSEL), where he leads a team exploring molecular and biomolecular systems through advanced simulations. Education: Ph.D. in Chemistry, Yale University, 2001 Sc.B. in Chemistry, Brown University, 1997 His research interests bridge theoretical and experimental physical chemistry, with a strong emphasis on aqueous electrolytes, biomolecular binding, and vibrational spectroscopy . He employs GPU-accelerated molecular dynamics and enhanced sampling techniques to study ion transport in aqueous solutions and the mechanisms of protein-DNA and protein-protein interactions, particularly in immunological contexts such as T-cell receptor binding. His work has significant implications for battery technologies and drug design. The 15 most recent publications reveal a consistent focus on molecular simulation, biophysical chemistry, and spectroscopy , with recurring themes in DNA-ligand binding, ion solvation, and immune recognition. His group develops and applies novel computational methods, such as the coupled local mode approach, to interpret vibrational spectra with high accuracy. Scientific Awards: Thomas P. Madden Award (2020) Rev. Edmund P. Joyce, C.S.C. Award for Excellence in Undergraduate Teaching (2019, 2012) Fellow, American Chemical Society (2016) Sloan Research Fellowship (2009) NSF CAREER Award (2009) Camille and Henry Dreyfus New Faculty Award (2005) Kavli Fellow, National Academies of Science (2011) Corcelli has advised numerous graduate students and postdoctoral researchers, many of whom have gone on to successful careers in academia and industry. His lab collaborates extensively with experimental groups, particularly in spectroscopy and immunology. He has secured substantial research funding and published over 85 peer-reviewed articles. His lab, CoMSEL, benefits from high-performance computing resources through the Center for Research Computing at Notre Dame, enabling large-scale simulations of complex molecular systems. Research Labs and Teams: The Computational Molecular Science & Engineering Laboratory (CoMSEL) is a multidisciplinary research group that combines theoretical chemistry, biophysics, and materials science. The team includes graduate students and staff scientists working on projects ranging from fundamental solvation dynamics to applied biomedical simulations.

Richard Durbinمشاهده پروفایل

استاد

• Evolutionary Genomics
• Computational Biology
• Human Genetics
• +۳ مورد دیگر

Professor Richard Durbin (FRS) is a computational biologist at the Department of Genetics , University of Cambridge, and Associate Faculty member at the Wellcome Trust Sanger Institute . His work spans computational methods development, large-scale genomics projects, and evolutionary studies. Academic Affiliation: Professor of Genetics (University of Cambridge) Research Institute: Associate Faculty (Wellcome Sanger Institute) Key Projects: 1000 Genomes Project, UK10K Project, Gorilla Genome Sequencing Research Interests Durbin's group focuses on: Evolutionary Genomics: Human population history through modern and ancient DNA, Malawi cichlid fish speciation with adaptive introgression Computational Methods: Burrows-Wheeler transform algorithms (BWA), variant call format (VCF), variation graph mapping (vg package) Genome Assembly: Long-read sequencing techniques for high-contiguity reference genomes across vertebrates Scientific Contributions Co-author of Biological Sequence Analysis (HMM methods for gene finding) Co-developer of ACeDB software and founding contributor to WormBase, Pfam, TreeFam, Ensembl Scientific Awards Fellow of the Royal Society (FRS) - Recognized for outstanding contributions to computational biology

Al Barrمشاهده پروفایل

استاد

• Computer Graphics
• Predictive Modeling
• Scientific Visualization
• +۵ مورد دیگر

Alan H. Barr is a Professor of Computer Science at the California Institute of Technology (Caltech), affiliated with the Division of Engineering and Applied Science and the Computation & Neural Systems (CNS) department. He is a founding member of the Caltech Computer Graphics Group and a leader in developing mathematically rigorous methods for computer graphics and predictive modeling. His research focuses on enhancing computational modeling accuracy through approaches like interval analysis and constraint-based systems. Notable contributions include deformable models, quaternion interpolation, and cellular simulation frameworks. He has advised over 20 graduate students, many of whom became industry leaders at Pixar, Microsoft Research, and academic institutions like NYU and Brown University. Awards include the ACM SIGGRAPH Achievement Award (1988) and ACM Fellow (1995). Research Interests: Predictive modeling with error bounds Scientific visualization and MRI data analysis Biophysical systems simulation (e.g., cellular organelles) Self-assembling robotic structures for space colonization Mathematically robust computer graphics techniques Key Collaborations: Caltech Biological Imaging Center (Beckman Institute) JPL (Jet Propulsion Laboratory) New computational substrates research (quantum/DNA computing) Recent Work: Expanding into computational biology, medical imaging optimization, and high-confidence systems for managing complex computational interactions. Active in interdisciplinary projects across Caltech divisions.

• Physics of Complex Systems
• Self-Assembly Processes
• DNA Nanotechnology
• +۱ مورد دیگر

Constantine Evans is a Research Fellow at the Hamilton Institute, Maynooth University, focusing on the physics of complex self-assembly processes. His work examines how simple particles organize into intricate structures through algorithmic self-assembly, with applications in DNA nanotechnology and computational modeling. Institution: Maynooth University Research Unit: Hamilton Institute Location: Eolas Building, 3rd Floor, Office 339 Research Interests: Evans investigates non-equilibrium self-assembly systems, particularly DNA tile crystal growth and kinetic control mechanisms. His research bridges physics, computational theory, and molecular engineering to uncover unexpected behaviors in basic physical processes. Publication Trends: His recent work (2018-2024) demonstrates interdisciplinary advancements in DNA computing, focusing on proofreading systems, tile compiler optimization, and kinetic modeling. These publications span peer-reviewed journals, conference proceedings, and algorithmic frameworks that connect theoretical computer science with experimental biophysics. Labs & Teams: He is affiliated with the Hamilton Institute, a research center specializing in systems biology, computational modeling, and interdisciplinary scientific investigations.

Juewen Liuمشاهده پروفایل

استاد

• Chemistry
• Nanotechnology
• Biosensors
• +۱ مورد دیگر

Juewen Liu is a Professor and Canada Research Chair in Biosensors and Bionanotechnology in the Department of Chemistry at the University of Waterloo, affiliated with the Faculty of Science. His research program employs principles of chemistry, physics, and biology to develop innovative nanoscale materials and systems with applications in sensing, diagnostics, and therapeutics. Research encompasses: DNA aptamer development and applications Nanoparticle engineering for biomedical use Biointerface chemistry innovations Nanozyme design and catalytic applications Liu maintains an extensive publication record in high-impact journals, with recent work emphasizing advanced biosensing platforms, targeted drug delivery systems, and nanomaterial-based solutions for environmental and health challenges. His research integrates fundamental science with practical applications in diagnostics and therapy. Teaching responsibilities include courses on nano-biomaterials and nano-instrumentation. Professor Liu collaborates extensively through the Waterloo Institute for Nanotechnology, Water Institute, and Centre for Bioengineering and Biotechnology.

• RNA Biology
• Genomics
• Transcriptomics
• +۵ مورد دیگر

Dr. Athma A Pai is an Associate Professor at UMass Chan Medical School, holding primary appointments in the RNA Therapeutics Institute and the T.H. Chan School of Medicine. She maintains extensive secondary appointments across multiple departments including Genomics and Computational Biology, Systems Biology, and several graduate programs at the Morningside Graduate School of Biomedical Sciences, reflecting the highly interdisciplinary nature of her work. Education: BS in Biochemistry/Anthropology from University of Pennsylvania PhD in Human Genetics from University of Chicago Postdoctoral training in RNA Genomics from MIT Dr. Pai's research program centers on RNA biology with particular emphasis on RNA processing, splicing mechanisms, and the regulation of gene expression. Her work investigates how environmental factors influence RNA processing through biochemical, molecular, and genetic mechanisms. She employs cutting-edge genomic and transcriptomic approaches to study alternative polyadenylation, mRNA transcript initiation and termination, and the spatial organization of RNA processing events within cells. Her research has significant implications for understanding fundamental gene regulation mechanisms and their roles in disease processes. Analysis of Dr. Pai's recent publications reveals a strong focus on developing high-resolution profiling methods for understanding transcriptional and translational regulation. Her work increasingly integrates computational approaches with experimental biology to investigate how RNA processing events are coordinated across the transcriptome. A notable trend is her exploration of how RNA processing contributes to inflammatory responses and cellular defense mechanisms, with implications for therapeutic development. Dr. Pai actively mentors students through multiple graduate programs at UMass Chan Medical School, including Biochemistry and Molecular Biotechnology, Biophysical Chemical and Computational Biology, Interdisciplinary Graduate Program, MD/PhD Program, RNA Therapeutics and Biology Program, and Systems Computational and Quantitative Biology. She maintains an active laboratory (Pai Lab) that welcomes postdoctoral researchers interested in RNA biology. Her laboratory website provides additional information about ongoing research projects and opportunities for collaboration and training, and she maintains a professional presence through her Twitter account (@athmapai).

Marcell K. Petersمشاهده پروفایل

پژوهشگر

• Biodiversity
• Community Ecology
• Climate Change
• +۵ مورد دیگر

Dr. Marcell K. Peters is a Senior Academic Councillor at the Chair of Animal Ecology and Tropical Biology (Zoology III) at the University of Bremen. His research focuses on biodiversity patterns, ecosystem functioning, and climate-land use interactions in tropical and montane environments, with extensive fieldwork in East Africa and the Amazon. He leads projects under DFG and EU funding, including the UPSCALE initiative. Habilitation in Zoology (University of Würzburg, 2018) PhD in Biology (University of Bonn, 2008) Diploma in Biology (RWTH Aachen & University of Bonn, 2003) Research spans multi-taxa community ecology, army ants and ant-following birds, DNA barcoding applications, and climate change impacts on pollination networks. Google Scholar highlights recent work on climate-agriculture interactions in sub-Saharan Africa, trait-based community assembly, and network resilience in biodiversity hotspots. His publications emphasize elevational gradients, disturbance ecology, and functional diversity across Mount Kilimanjaro studies. Current affiliations include the DFG Research Unit Kilimanjaro and EU-funded UPSCALE project. He employs advanced methods like airborne LiDAR for biodiversity prediction and investigates nutrient use by ant communities across continents.