Jan Madsen is a Professor at DTU Compute, Technical University of Denmark, and Head of the Embedded Systems Engineering section. His research focuses on system-level modeling and design of embedded computing systems, particularly cyber-physical systems, microfluidic biochips, and synthetic biology applications. Develops design automation tools and methodologies for embedded systems Supervises numerous PhD students and leads major research projects Research Interests Key areas include: Embedded systems-on-a-chip Cyber-Physical Systems (Internet-of-Things) Microfluidic Lab-on-Chip devices Synthetic biology with molecular computing Design, modeling, and optimization of complex systems Scientific Awards DATE Fellow (2019) IEEE CEDA Outstanding Recognition (2019) DTU Scientific Advise Award (2013) Best Paper Awards at MECO (2013) and CASES (2009) Jorck’s Foundation Research Award (1995) Publications His 14+ journal papers and 115+ conference papers demonstrate expertise in: SystemC-based modeling frameworks Energy-aware sensor networks Self-healing eDNA architectures Microfluidic biochip synthesis RTOS modeling and MPSoC exploration
جستوجوی استاد و پژوهشگر
استاد راهنما، استاد دانشگاه یا پژوهشگر مناسب برای مسیر پژوهشیتان را پیدا کنید و با او ارتباط بگیرید.
نمایش ۶۱-۷۵ از ۱۱٬۴۲۲ استاد راهنما
اطلاعات این پروفایلها از صفحات عمومی دانشگاهها جمعآوری شده و ممکن است بهروز نباشد.
Kuldeep S. Meel is the Stephen Fleming Early-Career Associate Professor at the School of Computer Science, Georgia Institute of Technology, and an Associate Professor at the University of Toronto (on leave). He previously held a NUS Presidential Young Professorship at the National University of Singapore. His research focuses on automated reasoning, aiming to enable computing systems to handle uncertain real-world environments through scalable techniques integrating randomized algorithms, statistical inference, formal methods, distribution testing, and software engineering. Core research areas: Automated Reasoning, Formal Methods, Approximate Model Counting, Probabilistic Inference, Constraint Solving His research group has achieved significant recognition in both individual awards and publications. Key trends in his recent work include advancing model counting algorithms, developing frameworks for probabilistic explanations, and improving scalability in formal verification and constraint satisfaction. His tools have consistently ranked top in international competitions, demonstrating practical impact in automated reasoning. 2019 NRF Fellowship for AI 2022 ACP Early Career Researcher Award 2020 IEEE Intelligent Systems AI's 10 to Watch Top placements in Model Counting, SAT, and CAV competitions He mentors a diverse group of PhD and Master's students and collaborates with institutions worldwide. His group's publications span premier conferences in AI, formal methods, and design automation, reflecting interdisciplinary contributions to theoretical and applied computer science.
Professor Daniel Segrè is a faculty member at Boston University, holding the title of Professor of Biology, Bioinformatics, and Biomedical Engineering. His research focuses on systems biology, microbial ecology, and metabolic engineering, with an emphasis on understanding complex biological networks and their applications in bioenergy and biomedicine. Segrè leads the Segre Lab ( segrelab.bu.edu ), where theoretical and computational approaches are applied to study metabolism, microbial interactions, and synthetic biology. Segrè earned his PhD from the Weizmann Institute of Science, Israel. His work bridges fundamental science and applied engineering, addressing topics such as microbial community dynamics, metabolic pathway design, and environmental microbiome applications. Research Interests: Systems biology of metabolism, evolution of biochemical networks, microbial interactions, bioinformatics, and environmental microbiome engineering. His lab develops computational models (e.g., COMETS) to simulate microbial ecosystems and design synthetic microbial communities for climate change mitigation and bioenergy production. Teaching: Courses include BE 777 (Computational Genomics), BF 821 (Bioinformatics Seminar), and BF 571 (Dynamics and Evolution of Biological Networks). These courses reflect his expertise in integrating computational methods with biological systems analysis.
- Knowledge Graphs
- Semantic Web
- Data Management
- +۷ مورد دیگر
Katja Hose is a Full Professor of Data Management at TU Wien's DBAI research unit, heading the Data Management and Knowledge-Driven AI Lab. She previously held a Poul Due Jensen Foundation Professorship at Aalborg University. Her research focuses on data and knowledge engineering, including graph databases, knowledge graphs, querying, analytics, and machine learning, with interdisciplinary applications in bioscience, healthcare, and environmental assessment. Education: PhD in Computer Science (Ilmenau University of Technology, 2009), Postdoc at Max Planck Institute for Informatics (2009–2012). Academic roles include Program Co-Chair for ISWC 2024 and EDBT 2023, and editorial board membership at VLDBJ and TGDK. She leads projects like TARGET (health virtual twins) and ARMADA (data management). Research Interests: Knowledge Graphs, Semantic Web, Big Data, Machine Learning, Data Integration, and Provenance Systems. Key contributions include SHACL shape extraction, conversational data analytics, and environmental knowledge graphs. Awards include the 2025 Distinguished Meta-Reviewer Award and 2024 Manfred Paul Award. Advising and Grants: Supervised students including E. Pürmayr (Diploma Thesis 2025). Active in EU projects (TARGET, ARMADA) and grant coordination. Labs/Teams: DMKI Lab at TU Wien, collaborating with interdisciplinary teams in healthcare and environmental science.
Clio Andrisمشاهده پروفایل
دانشیار
- Information Visualization
- Geovisualization
- GIS
- +۴ مورد دیگر
Clio Andris is an Associate Professor at Georgia Tech, jointly appointed in the School of City and Regional Planning and the School of Interactive Computing. She directs the Friendly Cities Lab, focusing on mathematical models of social networks applied to urban planning, transportation, and geography. Her work integrates spatial analysis with visualization, emphasizing interdisciplinary collaboration. Education and Career: Andris earned a PhD in Urban Information Systems from MIT (2011), where she was an NDSEG Fellow. She held postdoctoral positions at Singapore-MIT Alliance for Research and Technology and the Santa Fe Institute. Prior to Georgia Tech, she was a faculty member at Penn State’s Department of Geography, affiliated with the GeoVISTA Center. Research Focus: Her research bridges social networks, geovisualization, and urban informatics. Key areas include spatial social network analysis, GIS applications for urban policy, and the impact of digital tools on civic engagement. She has developed innovative visual analytics tools like SNoMaN and ROBIN to democratize spatial data exploration. Awards: She received the NSF CAREER Award (2021) and NDSEG Fellowship (2011). Her lab is affiliated with the Center for Spatial Planning Analytics and Visualization (CSPAV) and the Information Visualization Lab. Labs and Collaborations: The Friendly Cities Lab focuses on socially just urban design through computational methods. Her work addresses issues like food security networks, pandemic impacts on biodiversity, and community mapping for activism. Grants and Outreach: Her NSF-funded projects emphasize public good applications, such as real-time pandemic risk communication and educational tools for migration data. She actively collaborates with non-profits and policymakers to translate research into actionable urban strategies.
Muhammad Gulzariمشاهده پروفایل
استادیار
Dr. Muhammad Gulzari is an Assistant Professor at the School of Civil Engineering, University College Dublin (UCD). Previously, he held positions as Lecturer/Assistant Professor at the University of Galway (2023–2024), Adjunct Assistant Professor at Trinity College Dublin (2022–2023), and a Research Fellow at Trinity College Dublin (2021–2023). He earned his Ph.D. in Civil Structural Engineering from City University of Hong Kong (2021) and a B.Sc. in Civil Engineering from the University of Engineering and Technology Lahore (2017). Education: Bachelor of Engineering, Civil Engineering, University of Engineering and Technology Lahore Ph.D., Civil Structural Engineering, City University of Hong Kong Research Interests: His work focuses on structured materials and dynamics, including finite element modeling, phononic crystals, acoustic and mechanical metamaterials, vibration and noise control, and applications in structural health monitoring. He leads the Structured Materials and Dynamics Lab at UCD, exploring nonlinear and nonreciprocal metamaterials. Teaching and Awards: He has taught courses in Fluid Mechanics, Thermodynamics, and Combustion Engineering. Notable recognitions include the Seal of Excellence Award from the EU-Horizon MSCA Postdoctoral Fellowship (2021) and nominations for teaching excellence awards at Trinity College Dublin and University of Galway. Grants: TimberFlow: Enhancing Efficiency in Mass Timber Construction (Enterprise Ireland, 2025) Indoor Acoustic Quality via Acoustic Metamaterials (Enterprise Ireland, 2025) RUBBERPAVE: ELT Integration in Pavement Construction (Enterprise Ireland, 2024–2026) Deep Learning for Metamaterial Design (Irish Research Council, 2021–2023) Labs and Collaborations: His research group collaborates with industry partners like Amplitude Acoustics and G-frame Structures Ltd. Key projects include developing metamaterials for noise/vibration control and sustainable construction materials.
Emma Piersonمشاهده پروفایل
استادیار
- Artificial Intelligence
- Healthcare
- Health Equity
- +۳ مورد دیگر
Emma Pierson is an Assistant Professor of Computer Science at the University of California, Berkeley, affiliated with the Berkeley Artificial Intelligence Research Lab (BAIR) , Computational Precision Health , and the Center for Human-Compatible AI . She focuses on developing data science and machine learning methods to address issues in healthcare equity and social inequality . Her work includes studies on race adjustments in clinical algorithms, migration patterns, and leveraging LLMs for health equity. Education: Ph.D. in Computer Science from Stanford University (2020), Master’s in Statistics from the University of Oxford. Prior roles include Assistant Professor at Cornell Tech, Senior Researcher at Microsoft Research, and data scientist at 23andMe and Coursera. Research Interests: Her research spans fair clinical prediction , sparse autoencoders , health disparities , and algorithmic fairness . Notable projects include the MIGRATE dataset for granular migration analysis and studies on policing disparities. Awards: NSF CAREER Award, Rhodes Scholarship, Hertz Fellowship, MIT Technology Review 35 Innovators Under 35, and Samsung AI Researcher of the Year. She writes a statistics blog ( Obsession with Regression ) and contributes to media outlets like The New York Times and FiveThirtyEight . Labs/Teams: Leads the MIGRATE project, a collaboration to analyze fine-grained migration data. Engages in interdisciplinary work across AI, healthcare, and social science.
- Human Genetics
- Computational Biology
- Genomics
- +۳ مورد دیگر
Itsik Pe'er is a Full Professor and Vice-Chair in the Department of Computer Science at Columbia University's Fu Foundation School of Engineering & Applied Science, and holds a joint appointment as Professor of Systems Biology at the Vagelos College of Physicians and Surgeons. His research focuses on computational methods in human genetics, including genetic variation analysis, disease association studies, and algorithm development for genomic data. He leads the Itsik Pe'er Lab of Computational Genomics, which develops tools like Xplorigin, Germline, and SEACells to address challenges in genomics and medical research. His work spans machine learning applications in healthcare, microbiome analysis, and cancer genomics. Notable contributions include studies on hypertensive disorders in pregnancy, bias correction in predictive models, and the development of non-Euclidean learning libraries like Manify. Pe'er has advised students including Vladimir Vacic, Anat Kreimer, and Arthi Ramachandran, and collaborates on grants addressing genetic epidemiology and computational biology. His lab's location is in the Computer Science Building at Columbia's Morningside Campus.
Professor Knut Reinert is a leading figure in algorithmic bioinformatics at the Free University of Berlin, where he holds a professorship in the Department of Mathematics and Computer Science. He also maintains a significant affiliation with the Max Planck Institute for Molecular Genetics in Berlin, where he leads the Efficient Algorithms for Omics Data group. His research spans both institutions through the Reinert Lab, which focuses on developing novel computational approaches for biological data analysis. Reinert's educational background includes a Diploma in Computer Science (1994) and a Doctorate (Dr. Ing./Ph.D., 1999, with honors) from the Max-Planck-Institut for Computer Science and Universität des Saarlandes in Saarbrücken. Prior to his professorship, he worked as a computer scientist under Prof. Gene Myers at Celera Genomics in Rockville, USA (1999-2002). His primary research interests center on algorithmic bioinformatics with specific focus on developing novel algorithms and data structures for biomedical mass data analysis. This includes creating mathematical models for genomic sequence analysis and algorithms for mass spectrometry data to detect differential protein expression between normal and diseased samples. His work bridges the gap between computational tool development and practical biological applications, with particular emphasis on NGS and proteomics data. The publications and projects led by Prof. Reinert demonstrate a consistent focus on advancing computational methods in bioinformatics. His research spans genomic sequence analysis, RNA research (particularly long non-coding RNAs), parallel computing applications, and GPU acceleration for biological data processing. The work shows increasing sophistication in handling large-scale biological datasets through innovative algorithmic approaches. Intel® Parallel Computing Center designation for his lab CUDA Research Center status DFG funding of 530 thousand Euros for RNA research de.NBI funding of 2 million Euros BMBF funded projects 'LIVE-DREAM' and 'EssBar' Prof. Reinert leads multiple significant research projects and has established strong collaborations with international partners including Texas A&M, Kings College London, Eberhardt-Karls Universität Tübingen, Robert-Koch-Institute, and various Turkish institutions. His lab receives funding from major organizations including DFG, BMBF, and Intel. The Reinert Lab maintains active teaching responsibilities at FU Berlin, offering courses at BSc, MSc, and PhD levels using both traditional and innovative learning concepts like e-learning and inverted classrooms. The Reinert Lab consists of two interconnected research groups that work closely with experimental biologists and medical researchers to develop practical computational solutions for real-world biological problems. The lab has established itself as a key player in the German and international bioinformatics community through its development of the widely-used SeqAn library and participation in national infrastructure initiatives.
David R. Koesمشاهده پروفایل
دانشیار
David R. Koes is an Associate Professor in the Department of Computational and Systems Biology at the University of Pittsburgh, affiliated with the School of Medicine. He holds roles such as Associate Director of the Joint CMU-Pitt Computational Biology PhD Program (CPCB) and is involved in multiple graduate programs including Intelligent Systems and Computational Biomedicine. His research focuses on developing computational algorithms and systems for drug discovery, emphasizing open-source software and machine learning applications in biomedical data. Koes teaches courses like MSCBIO2025 (Bioinformatics Programming in Python) and MSCBIO2065 (Scalable Machine Learning for Big Data Biology). He has secured NIH funding (R35GM140753) and collaborated on projects with institutions like NVIDIA and Google Cloud. His lab develops tools such as GNINA, Pharmit, and 3Dmol.js, and actively contributes to open drug discovery initiatives. Education: PhD in Computer Science from Carnegie Mellon University (CMU). Research Interests: Leveraging computation and AI for drug design, molecular docking, pharmacophore modeling, and open science. Specific areas include developing scalable machine learning pipelines, virtual screening systems, and tools for 3D molecular analysis. Grants and Funding: Current NIH R35 grant and prior support from NSF, Relay Therapeutics, and others. His work emphasizes translating computational methods into practical drug discovery solutions. Lab and Teams: Directs a lab focused on computational drug discovery, collaborating with multiple academic and industry partners. Supervises graduate students and postdocs in projects spanning AI-driven drug design, molecular modeling, and software development.
Marta Kwiatkowska is a Professor of Computing Systems at the University of Oxford and a Fellow of Trinity College. Her research focuses on probabilistic verification , quantitative model checking , and formal methods for complex systems including autonomous robots, medical devices, and biological systems. She leads the development of the PRISM and PRISM-games probabilistic model checkers. Key research areas: Probabilistic systems, formal verification, autonomous robotics, medical device analysis, systems biology Grants: ERC Advanced Grant VERIWARE, EPSRC Programme Grant Mobile Autonomy Awards: 2024 ETAPS Test-of-Time Tool Award for PRISM Students: Current and former advisees in topics spanning formal methods, robotics, and quantitative verification The PRISM-games extension enables verification of stochastic multi-player games with applications in network protocols, autonomous systems, and game theory. Her work bridges theory, algorithms, and practical implementation, with real-world applications in ubiquitous computing and nanotechnology.
Ahmet Acarمشاهده پروفایل
دانشیار
Dr. Ahmet Acar is an Associate Professor at the Department of Biological Sciences, Middle East Technical University (METU), Ankara, Turkey. He leads the Cancer Precision Medicine and Drug Resistance Laboratory, focusing on understanding mechanisms of drug resistance in cancer. His research integrates experimental models, next-generation sequencing, and deep learning to address clinical challenges in cancer therapy. Dr. Acar holds a B.Sc. from METU's Biological Sciences department and a Ph.D. from the Cancer Research UK Manchester Institute. He completed postdoctoral training at the Institute of Cancer Research, London, and the University of Manchester. Research Interests: Drug resistance mechanisms, precision oncology, tumor microenvironment modeling, patient-derived organoids, computational pathology, and evolutionary cancer biology. His lab develops 2D/3D co-culture systems, PDO biobanks, and AI-driven histopathology tools to improve treatment strategies. Recent Work Trends: Recent publications emphasize tumor evolution modeling, matrix mechanics in drug resistance, and AI applications in histopathology. Collaborations with hospitals in Turkey and Europe support PDO biobank initiatives. His team explores evolutionary steering strategies to exploit collateral drug sensitivities. Labs/Teams: Precision Medicine and Drug Resistance Lab at METU focuses on interdisciplinary approaches combining wet-lab experiments with computational methods. Current projects include ex vivo tumor modeling and AI-driven diagnostic tools for oncology.
- Statistical Genetics
- Genomics
- Biostatistics
- +۵ مورد دیگر
Kathryn Roeder is the UPMC University Professor of Statistics and Life Sciences at Carnegie Mellon University (CMU), affiliated with the Dietrich College of Humanities and Social Sciences and the Departments of Statistics & Data Science and Computational Biology. Her research focuses on developing statistical methods for genetic and genomic data, particularly in identifying autism risk genes and analyzing single-cell multi-omic data. She earned her Ph.D. in Statistics from Penn State University and has been at CMU since 1994, previously serving as Vice Provost for Faculty (2015–2019). Education: Ph.D. in Statistics, Penn State University (1988) B.S. in Wildlife Resources, University of Idaho (1982) Research Interests: Her work integrates modern statistical techniques (high-dimensional statistics, machine learning, networks) to study complex diseases like autism and schizophrenia. Recent efforts include tools for analyzing single-cell RNA-seq and proteomic data, such as UNICORN, DAWN, and SCEPTRE. Key Awards: COPSS Distinguished Achievement Award (2020) National Academy of Sciences Member (2019) COPSS Presidents’ Award (1997) AAAS Fellow (2020) Advising & Grants: She has advised over 20 Ph.D. students, many contributing to landmark studies in autism genetics. Her grants include NIH funding for projects like the Autism Sequencing Consortium. Current research teams focus on computational biology and statistical genetics. Labs & Collaborations: Her lab develops software tools (e.g., TADA, MIND) and collaborates with the Autism Sequencing Consortium and iPSYCH-BROAD Consortium on large-scale genomic studies.
- Design and analysis of computer algorithms
- Automata and formal languages
- Parallel algorithms
- +۵ مورد دیگر
Wojciech Rytter is a full professor at the Institute of Informatics, Department of Mathematics and Informatics at the University of Warsaw, Poland, holding this position continuously since October 1971. His academic career includes significant international appointments as full professor at New Jersey Institute of Technology (2002-2004), Liverpool University (1997-2002), and Bonn University (1994-1995), and as visiting professor at University of California, Riverside (1992-1993) and University of Warwick (1985-1986). He earned his MSc in 1971, PhD in 1975, habilitation in 1985, and was awarded the scientific degree of professor in 1997, all from Warsaw University. Professor Rytter's research focuses on the design and analysis of computer algorithms, with particular expertise in automata and formal languages, parallel algorithms, and text algorithms. His work spans efficient sequential and parallel algorithms, automata theory, complexity of recognition and parsing of context-free languages, pattern matching, algorithmics of WWW, parallel combinatorial computing, graph-theoretic algorithms, and algorithmics of highly compressible objects. His theoretical contributions have practical applications in computational biology, bioinformatics, and text processing systems. His recent publications (2022-2025) demonstrate continued activity in string algorithms, particularly in pattern matching, string covers, and combinatorics on words, with a strong focus on theoretical computer science with applications in bioinformatics. 200 problems on automata, languages, computations (Cambridge University Press 2023) 125 Problems in Text Algorithms (Cambridge University Press, 2021) Jewels of Stringology (World Scientific, 2002) Fast parallel algorithms for matching problems in graphs (Oxford University Press 1998) Text algorithms (Oxford University Press 1994) Professor Rytter has collaborated extensively with researchers including Jakub Radoszewski, Tomasz Walen, Tomasz Kociumaka, and Maxime Crochemore. He is a member of the Academy of Europe (elected 2011, Informatics section) and has authored or co-authored more than 130 publications. He maintains an active research laboratory focused on string algorithms and combinatorics on words at the University of Warsaw.
- Machine Learning
- Genomics
- Gene Regulatory Networks
- +۳ مورد دیگر
Sushmita Roy is a Professor at the University of Wisconsin–Madison, affiliated with the Department of Computer Sciences and the College of Letters and Science. Her research focuses on developing computational methods in statistical machine learning to understand gene regulatory networks in living cells, particularly under environmental, developmental, disease, and evolutionary contexts. She explores bulk and single-cell genomic data integration to study processes like cell fate specification, host-microbe interactions, and diseases such as cancer and neurodevelopmental disorders. Her work emphasizes three key areas: inference of genome-scale transcriptional networks, evolutionary analysis of regulatory networks, and 3D genome organization dynamics. Roy’s lab collaborates across disciplines, leveraging genomic data from plant and mammalian systems. She has contributed to methodologies for analyzing chromatin accessibility, single-cell profiling, and network-based models of pathogen systems. Her affiliations include Wisconsin Institutes for Discovery, and she is a leader in computational biology and systems genomics research.
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