جستجوی استاد راهنمای دانشگاهی

Vivek Shenoyمشاهده پروفایل

استاد

• Mechanobiology
• Multiscale Modeling
• Biomaterials
• +۶ مورد دیگر

Vivek Shenoy is the Eduardo D. Glandt President's Distinguished Professor at the University of Pennsylvania, with primary appointments in the Department of Materials Science and Engineering and secondary appointments in Bioengineering and Mechanical Engineering and Applied Mechanics. He leads the Multiscale Mechanobiology and Biomaterials Laboratory, which focuses on developing theoretical frameworks and numerical methods to understand complex biological and engineering systems across multiple length scales. Shenoy's research spans mechanobiology, chromatin organization, cell mechanics, and biomaterials. His work addresses the fundamental challenge of modeling how small-scale cellular phenomena couple with long-range tissue-level interactions across micrometers to centimeters. By integrating insights from soft matter physics, solid mechanics, chemistry, and applied mathematics, his group develops multiphysics continuum and mesoscale theories to elucidate mechanisms controlling both biological and engineering systems. His recent publications demonstrate an increasing focus on nuclear mechanics, chromatin organization, and the interplay between mechanical forces and gene regulation. Analysis of Shenoy's publication record reveals a strong interdisciplinary approach, with high-impact papers spanning biophysics, materials science, and cell biology. His work shows consistent evolution from fundamental mechanics of materials to complex biological systems, with recent emphasis on the mechanical regulation of chromatin architecture, cell migration dynamics in 3D environments, and mechanotransduction in development and disease. His publications appear regularly in top journals including Nature, Science, and their affiliated publications, demonstrating significant influence across multiple fields. Eduardo D. Glandt President's Distinguished Professor Multiple publications in Nature, Science, and PNAS Active research program with publications through 2025 Shenoy actively mentors students and postdocs through his laboratory, with numerous co-authored publications indicating strong mentorship. His research program appears to be well-funded through multiple grants supporting his work in mechanobiology and biomaterials. The Multiscale Mechanobiology and Biomaterials Laboratory maintains active collaborations across disciplines and institutions, reflecting the interdisciplinary nature of his research. The Multiscale Mechanobiology and Biomaterials Laboratory, housed within the Department of Materials Science and Engineering at the University of Pennsylvania, serves as the primary research hub for Shenoy's work. The lab maintains an active presence on social media (Twitter: @ShenoyLab) for updates on activities and publications. Their research approach combines theoretical modeling with experimental validation to address fundamental questions at the interface of mechanics, materials science, and biology.

Benjamin Machtaمشاهده پروفایل

استادیار

• Biophysics
• Condensed Matter Physics
• Statistical Physics
• +۳ مورد دیگر

Benjamin Machta is an Assistant Professor of Physics at Yale University, affiliated with the Department of Physics and the QBio Institute. He holds a BS from Brown University and a PhD from Cornell University, followed by a postdoctoral fellowship at Princeton University. His research focuses on applying theoretical physics to understand biological systems, particularly leveraging statistical physics and information theory to study biological membranes near critical points and the energetic constraints of biological signaling. Education: BS in Physics (Brown University), PhD in Physics (Cornell University), Postdoc at Princeton University (Lewis-Sigler Theory Fellow). Research Interests include: membrane criticality, phase transitions in biological systems, information-theoretic limits in organism function, and energy dissipation in biological processes. His work often bridges theoretical models with experimental data, such as collaborations with Sarah Veatch’s lab on membrane phase behavior. Publications highlight themes like membrane criticality, protein phase separation, and energy constraints in signaling. His group’s current projects explore cochlear mechanics, thermodynamic control in biological systems, and the role of criticality in sensory systems. Awards: 2019 Simons Investigator Award. Lab Affiliations: QBio Institute and Department of Physics at Yale, located in YSB-C164. Group members include postdocs Isabella Graf and Michael Abbott, and graduate students Asheesh Momi, Mason Rouches, and others.

Josh Atkinsonمشاهده پروفایل

استادیار

• Synthetic Biology
• Protein Engineering
• Electrochemistry
• +۷ مورد دیگر

Josh Atkinson is an Assistant Professor in the Department of Civil and Environmental Engineering and the Omenn-Darling Bioengineering Institute at Princeton University. His research focuses on using synthetic biology and protein engineering to control electron transport in microbes for environmental applications, such as bioelectronic sensors and bioremediation. The Atkinson Lab investigates microbial energy processing, biofilm-electronic interfaces, and sustainable biotechnologies. Affiliations: Princeton University, Omenn-Darling Bioengineering Institute Research Interests: Microbial electron transport, bioelectronic systems, environmental monitoring, sustainable catalysis His work bridges disciplines like electrochemistry, bioengineering, and environmental science to engineer living materials for real-world challenges. The lab recruits students across levels, emphasizing diversity and interdisciplinary collaboration. Recent projects include real-time contaminant sensors and light-controlled biofilm patterning. Articles highlight innovations in bioelectronics and microbial systems engineering. The lab’s future directions involve scaling-up bioelectronic devices and enhancing microbial community understanding.

Celeste Saguiمشاهده پروفایل

استاد

• Computational Biophysics
• Biomolecular Simulations
• Free Energy Methods
• +۵ مورد دیگر

Celeste Sagui is a Professor in the Department of Physics at North Carolina State University (NC State), affiliated with the College of Sciences. She holds additional roles as a faculty affiliate in Genomics Sciences at NC State and is a member of the Center for High Performance Simulation. Her research focuses on computational biophysics, biomolecular simulations, and free energy methods applied to nucleic acid structures, protein dynamics, and nanotechnology systems. She has contributed to the AMBER simulation package development, co-authoring versions from 10 to 14. Education: Doctorate in Physics, University of Toronto (1995) Licentiate degree, National University of San Luis, Argentina Research Interests: Sagui’s work explores DNA/RNA structure and phase transitions, electrostatic interactions, and methodologies for large-scale molecular simulations. Recent studies include nucleic acid hairpin instabilities linked to neurodegenerative diseases, polyglutamine aggregation mechanisms, and novel DNA motifs like the eGZ structure in Z-DNA. She employs quantum chemistry, density functional theory, and phase-field models to investigate systems ranging from biomolecules to nanomaterials. Publications: Her recent work emphasizes nucleic acid dynamics, free energy landscapes, and computational methods for studying diseases such as Friedreich’s ataxia and polyglutamine disorders. Key contributions include advancements in laser-driven simulations and infrared spectroscopy analysis of protein structures. Labs/Teams: Active in the Center for High Performance Simulation, focusing on high-throughput computational modeling and collaborative software development for biomolecular research.

• Cell Biology
• Biophysics
• Mechanobiology
• +۳ مورد دیگر

Pere Roca-Cusachs Soulere is a Full Professor at the University of Barcelona and Group Leader at the Institute for Bioengineering of Catalonia (IBEC). His research focuses on understanding how cells detect and respond to mechanical signals through physical and molecular mechanisms. He holds significant roles in both academic and research institutions, including leadership in IBEC's Cellular and Molecular Mechanobiology group. Education: PhD in cellular biophysics (2007) from the University of Barcelona Medical School; postdoctoral research at Columbia University (2007–2011). Established his group at IBEC in 2012. Awards include the EMBO Young Investigator Award, City of Barcelona Award, and EBSA Young Investigator Award. Research Interests: Mechanobiology, cellular mechanotransduction, force transmission, nuclear mechanics, and integrin-mediated adhesion. His work bridges biophysics, cell biology, and engineering to study how mechanical forces influence cellular behavior and disease processes. Awards: Recognized for contributions to mechanobiology, including EMBO membership and multiple prestigious awards. His lab develops innovative tools like the MIRO chip to model tumor-immune interactions. Advising & Grants: Leads a multidisciplinary team, collaborating on projects funded by grants focusing on cell mechanics, cancer biology, and tissue engineering. His work integrates experimental and computational approaches to advance understanding of cellular force dynamics. Labs/Teams: Directs the Cellular and Molecular Mechanobiology group at IBEC, a hub for cutting-edge research on mechanosensing and mechanotransduction.

• Dynamic Systems and Control
• Mechatronics
• Digital Printing and Fabrication
• +۷ مورد دیگر

George T. C. Chiu is a Professor in the School of Mechanical Engineering at Purdue University, with courtesy appointments in Electrical and Computer Engineering and Psychological Sciences. He holds a 50% appointment as Assistant Dean for Global Engineering Programs and Partnerships. His research focuses on mechatronics, dynamic systems and control, functional printing, and human-machine interaction, with applications in biomedical engineering, robotics, and advanced manufacturing. Education: PhD (1994), MS (1990) University of California, Berkeley; BS (1985) National Taiwan University. Research interests emphasize application-driven solutions for printing technologies, motion control, and embedded systems. Notable projects include developing inkjet printing for biomedical materials and sensor systems. Awards include ASME Fellowship (2013) and the 2024 ASME Rabins Leadership Award. Publications span topics like inkjet drop dynamics, control systems, and biofabrication. He has led initiatives such as the Purdue FIRST Programs, fostering K-12 STEM education through robotics mentorship. Editorial roles include Editor-in-Chief of IEEE/ASME Transactions on Mechatronics (2017-2019).

Kunihiko Kanekoمشاهده پروفایل

استاد

• Theoretical Biophysics
• Complex Systems
• Chaos
• +۶ مورد دیگر

Kunihiko Kaneko is a Professor at the Niels Bohr Institute, University of Copenhagen, with a distinguished career in theoretical biophysics and complex systems. He received his PhD and MSc in Physics from the University of Tokyo, and has held leadership roles at the Universal Biology Institute and Center for Complex Systems Biology. PhD Physics, 1984 - University of Tokyo MSc Physics, 1981 - University of Tokyo His research spans five primary areas: Universal Biology, Evolutionary Constraints, Ecosystem Dynamics, Neural Cognition, and Universal Anthropology. He has published extensively on multi-level consistency principles, dimensional reduction in biological systems, and reciprocity between robustness and plasticity across scales. Recent publications show strong focus on microbial ecosystems (2025), evolutionary game theory (2025), neural modular architectures (2024), and dimensional reduction in cellular systems (2024). His work bridges physics and biology through dynamical systems theory applied to diverse phenomena from protocells to human societies.

Nika Danialمشاهده پروفایل

دانشیار

• Metabolic Biology
• Cancer Research
• Diabetes
• +۴ مورد دیگر

Dr. Nika Danial is an Associate Professor of Cell Biology at Harvard Medical School and the Department of Cancer Biology at Dana-Farber Cancer Institute. She leads the Danial Lab, investigating metabolic mechanisms that regulate cellular adaptation to stress, with a focus on fuel utilization in health and disease. Dr. Danial holds additional roles as Co-Director of the NCI-funded T32 Training Program in Cancer Chemical Biology and Metabolism. Her research integrates biochemistry, mouse models, and metabolomics to study metabolic contributions to cancer, diabetes, and neurological disorders. Education: PhD from Columbia University (1999), postdoctoral training at Harvard Medical School and Dana-Farber under Dr. Stanley Korsmeyer. Key research areas include mitochondrial dynamics, glucose metabolism pathways, and the interplay between inflammation and metabolic signaling. The lab has pioneered studies on how metabolic flexibility impacts disease progression in pancreatic islets, lymphoma subtypes, and neuronal excitability. Publications highlight discoveries in mitochondrial fatty acid oxidation regulation, urea cycle anti-inflammatory mechanisms, and metabolic signatures in cancer subtypes. Her work has implications for developing therapies targeting metabolic vulnerabilities in diseases like diffuse large B-cell lymphoma and type 1 diabetes. The Danial Lab emphasizes rigorous training for the next generation of scientists through mentorship programs and interdisciplinary collaboration.

Moira Whyteمشاهده پروفایل

استاد

• Respiratory medicine
• Inflammation
• Neutrophil biology
• +۵ مورد دیگر

Moira Whyte serves as Sir John Crofton Professor of Respiratory Medicine and Head of Edinburgh Medical School at the University of Edinburgh, while directing the MRC University of Edinburgh Centre for Inflammation Research. Her leadership spans clinical academia and major research initiatives focused on respiratory pathophysiology. Her educational background includes a 1st Class B.Sc. (1981), M.B., B.S. (1984), and Ph.D. (1993) from the University of London, complemented by professional qualifications: M.R.C.P. (1987), F.R.C.P. (1998), and F.Med.Sci. (2005) from the Academy of Medical Sciences. Whyte's research centers on neutrophil biology, macrophage function, and hypoxia signaling pathways in respiratory diseases. Her work explores how oxygen-sensing mechanisms like HIF pathways regulate immune cell function in COPD, pulmonary fibrosis, and bacterial infections, with particular focus on cellular metabolism and inflammation resolution. Analysis of her 15 most recent publications reveals consistent focus on neutrophil and macrophage biology within respiratory diseases, with growing emphasis on metabolic regulation of immune responses. Her work bridges basic science (using zebrafish models) with clinical applications, particularly in COPD and pulmonary fibrosis. Her scientific recognition includes: 2014 OBE for Services to Respiratory Medicine 2014 Foundation Fellow of the European Respiratory Society 2005 Fellow, Academy of Medical Sciences 2002 Tudor Edwards Lecturer of the Royal College of Physicians 1994 Wellcome Trust Advanced Fellowship 1989 MRC Clinical Training Fellowship Whyte directs substantial research funding, including a £6.4M Wellcome Trust Clinical PhD Programme (ECAT-Plus) and multiple grants investigating macrophage function in COPD, hypoxia pathways in pulmonary fibrosis, and neutrophilic inflammation regulation. Her collaborative approach is evident in multi-institutional projects like the EME-TIPAC study on pulmonary fibrosis. As Director of the MRC Centre for Inflammation Research, she leads a multidisciplinary team investigating fundamental mechanisms of inflammation across multiple disease contexts, with particular strength in respiratory immunology and translational applications.

• Physiological Ecology
• Endocrinology of Hibernation
• Biological Rhythms
• +۳ مورد دیگر

Brian M. Barnes is a Professor of Zoophysiology at the University of Alaska Fairbanks (UAF), affiliated with the Institute of Arctic Biology and the Department of Biology and Wildlife. He has held roles including INBRE Director, Toolik Field Station Co-PI, and Interim Director of the Institute of Arctic Biology. His research focuses on physiological ecology, endocrinology of hibernation, and biological rhythms in Arctic animals. Education: BS in Biology (UC Riverside, 1977); PhD in Zoology (University of Washington, 1983). Postdoctoral training at UC Berkeley and international collaborations in Norway and the Netherlands. Awards include NSF grants and leadership in Arctic research networks. Research Interests: Hibernation physiology and mechanisms Circadian rhythms in polar vertebrates Overwintering strategies of Arctic mammals and insects Climate change impacts on animal phenology Notable Contributions: Discovered freeze-avoidance mechanisms in Arctic ground squirrels Pioneered studies on hibernation energy conservation and metabolic suppression Co-developed tools for field studies at the Toolik Field Station Lab/Teams: Leads research groups studying Arctic hibernators, including collaborations on black bear hibernation genomics and insect antifreeze proteins. Advises students in physiology, ecology, and comparative biology.

Jian Zhangمشاهده پروفایل

استادیار

• Biomedical Engineering
• Mechanobiology
• Cancer Metabolism
• +۵ مورد دیگر

Jian Zhang is an Assistant Professor in the Department of Biomedical Engineering at the University of Arkansas. He obtained his B.S. in Theoretical and Applied Mechanics from Peking University (2011) and a Ph.D. in Biomedical Engineering from Carnegie Mellon University (2016), followed by postdoctoral research at Vanderbilt University (2017-2022). His work integrates engineering , mechanics , and computational biology to study cancer mechanobiology and regenerative medicine. Education: B.S., Theoretical & Applied Mechanics, Peking University (2011) Ph.D., Biomedical Engineering, Carnegie Mellon University (2016) Dr. Zhang's research focuses on cancer mechano-metabolism —how mechanical forces interact with cellular bioenergetics to influence tumor progression. His lab develops bioengineering tools and computational models to study cell migration in 3D environments, nuclear mechanics, and extracellular matrix interactions. Recent work explores leader-follower dynamics in collective invasion and mitochondrial transfer in aggressive cancers. The 15 most recent publications highlight themes in cancer metabolism , nuclear deformation , and matrix stiffness , with applications in metastasis and regenerative medicine. His articles span computational modeling of energy-driven invasion hierarchies, biophysical studies of nuclear mechanics, and translational research connecting tissue density to cancer progression. At the University of Arkansas, Dr. Zhang teaches BMEG 26104 Introduction to Biomedical Engineering (Fall) and BMEG 4700V/5700V Special Topics: Physics of the Cell (Spring). The Zhang Lab (Cell Biophysics Laboratory) emphasizes collaborative research, mentorship, and the development of precision mechanomedicine tools to address challenges in cancer and regenerative medicine.

Debanjan Sarkarمشاهده پروفایل

دانشیار

• Biomaterials
• Cell Biology
• Regenerative Medicine
• +۴ مورد دیگر

Debanjan Sarkar is an Associate Professor of Teaching and Director of Undergraduate Studies in the Department of Biomedical Engineering at the School of Engineering and Applied Sciences, University at Buffalo. He is also affiliated with the Jacob's School of Medicine and Biomedical Sciences, where his full profile can be found. His research focuses on biomaterials and regenerative therapeutics, particularly exploring how engineered materials interact with cells to regulate growth, differentiation, and repair processes. Debanjan holds a PhD and has conducted extensive research in cell-substrate interactions, stem cell fate control, and mechanomorphological guidance of colloidal gels. His work integrates polymer chemistry with biomedical applications, emphasizing biodegradable elastomers, hydrogels, and extracellular matrix mimics for regenerative medicine and tissue engineering. Key research themes include drug delivery systems using novel biomaterials, mechanobiology of endothelial cells, and the design of tunable materials to direct cell behavior. His studies span from fundamental material characterization to translational applications in dentistry and vascular repair. Debanjan leads the Biomaterials and Regenerative Therapeutics Lab, which develops innovative materials to address clinical challenges in tissue regeneration. While no formal advisees are listed, his educational role underscores his commitment to undergraduate training in biomedical engineering principles and practices.

Job Boekhovenمشاهده پروفایل

دانشیار

• Synthetic Chemistry
• Biophysics
• Biochemistry
• +۷ مورد دیگر

Prof. Dr. Job Boekhoven is an Associate Professor at the Department of Bioscience , TUM School of Natural Sciences , Technical University of Munich . His research focuses on synthetic life , chemically fueled self-assembly , and supramolecular materials , aiming to synthesize life from scratch. Research Interests include creating synthetic cells that compete for resources, replicate, and undergo Darwinian evolution . His lab designs molecules like lipids , peptides , and nucleic acids that self-assemble into active compartments regulated by chemical energy. These systems exhibit life-like hallmarks such as emergence , self-division , and controllable lifetimes . Scientific Awards include: ERC Consolidator Grant (2024) Lecturer Award by Association of the Chemical Industry (2024) ERC Starting Grant (2019) Volkswagen Foundation 'Life?' Grant (2019) Max Planck Fellow (2019) VCI Dozentenpreis (2021) Thieme Chemistry Journal Award (2017) Rubicon Postdoctoral Fellowship (2013) Publications highlight trends in nonequilibrium materials , dynamic combinatorial libraries , and protocell engineering . His work bridges synthetic chemistry with biophysics to explore life's origins and applications in materials science .

Fabrizio Marinelliمشاهده پروفایل

دانشیار

• Biophysics
• Molecular Simulation
• Membrane Transport
• +۳ مورد دیگر

Fabrizio Marinelli is an Associate Professor of Biophysics and Data Science at the Medical College of Wisconsin (MCW), effective July 2025, and holds an adjunct senior investigator position at the Versiti Blood Research Institute. He previously served as a staff scientist at the National Heart, Lung, and Blood Institute (NHLBI/NIH) and conducted postdoctoral research at the Max Planck Institute of Biophysics and NIH. Educational background includes a PhD in Statistical and Biological Physics from the International School for Advanced Studies (Trieste, Italy), an MS in Chemistry from La Sapienza University (Rome), and postdoctoral training in molecular biophysics. His research focuses on computational modeling of molecular mechanisms in membrane transport, signaling, and morphological changes, integrating advanced simulation techniques with experimental data (e.g., EPR/DEER, HDX-MS, cryo-EM). Key methodologies include enhanced sampling methods, free-energy calculations, and machine learning. Research highlights include elucidating mechanisms of Na+/Ca2+ exchangers, ion selectivity in lysosomal K+ channels, and structural interpretation of DEER and HDX data. He leads the Biophysics Graduate Program’s recruitment efforts and actively collaborates with experimental labs to bridge theory and experiment. Lab members include postdocs William Brown and Sandra Byju, and graduate student Tyler Trask. Publications emphasize computational tools (e.g., PLUMED, Colvars library) and reproducibility in molecular simulations. His work aims to advance therapies for infectious diseases, drug resistance, and cancer through mechanistic insights into proteins and membranes.

Adrian Whittyمشاهده پروفایل

دانشیار

• Biochemistry
• Structural Biology
• Drug Discovery
• +۳ مورد دیگر

Adrian Whitty is an Associate Professor in the Department of Biology at Boston University . His research focuses on protein-protein and protein-ligand recognition, particularly in developing mechanistic understandings of growth factor receptor activation and advancing drug discovery for protein-protein interaction inhibition. Education: B.Sc. (Honors) in Chemistry from King’s College, University of London (1985); Ph.D. in Organic Chemistry from the University of Illinois at Chicago (1991); Postdoctoral Research Fellow at Brandeis University's Biochemistry Department (1990-93). His work integrates biochemical and cell-based assays using advanced technologies like FRET, Time-Resolved Fluorescence, and Surface Plasmon Resonance (Biacore 3000). He collaborates with computational chemists, organic synthesis experts, X-ray crystallographers, and biologists to develop novel approaches for designing small molecule inhibitors of protein-protein interactions. Recent publications highlight trends in machine learning applications for molecular scientists, structural analysis of enzyme mechanisms, macrocycle-based drug design, and quantitative studies of protein interaction energetics. His lab emphasizes rigorous hypothesis-driven experimental design, preparing students for careers in academia or industry. Advisory and leadership roles include membership in The Protein Society (2008-present), the American Society of Biochemistry and Molecular Biology (ASBMB) Governing Council (2007-present), and founding roles in the Council for Systems Biology in Boston (CSB2) and the Institute for Chemical Biology and Drug Discovery at SUNY Stony Brook. His laboratory is equipped with state-of-the-art facilities for fluorescence, analytical ultracentrifugation (AUC), dynamic light scattering (DLS), isothermal titration calorimetry (ITC), and tissue culture, supporting diverse techniques including flow cytometry and reaction pathway modeling with Mathematica and MATLAB.