Shaul Pollak Pasternak

Shaul Pollak is an Assistant Professor at the Division of Microbial Ecology within the Centre for Microbiology and Environmental Systems Science at the University of Vienna. His research focuses on bacterial interactions in ecosystems, particularly their roles in plant pathogen protection and carbon cycling across soil and marine environments. He leads a research group investigating how microbial processes scale from genetic mechanisms to planetary biogeochemical cycles.

His primary research interests include microbial community assembly, bacterial metabolism of complex biopolymers, and evolutionary genomics of marine cyanobacteria. Current projects leverage genomic dark matter to predict soil carbon fluxes, examine plant-bacteria interactions under environmental change, and explore the diversity of Prochlorococcus marinus. His interdisciplinary approach integrates genomics, high-throughput experiments, and machine learning to bridge ecological and evolutionary theory.

Analysis of his 2022-2025 publications reveals consistent themes in microbial community dynamics, with emphasis on polysaccharide degradation mechanisms, phage-bacteria interactions, and genomic predictors of bacterial metabolic functions. His work demonstrates how bacterial trade-offs and cross-feeding structures shape ecosystem processes from ocean biogeochemistry to human gut microbiome organization.

Dr. Pollak actively recruits PhD students and postdoctoral researchers through university stipend programs, with current group members including Thomas Gaehtgens, Gerhard Gruber, Jyothsna Pujar, Qi Qi, Lior Shachar, Marco Sing, and Joana Valèrio. His laboratory maintains active collaborations across soil and marine microbial ecology projects, with research infrastructure supported by University of Vienna resources and external funding.