Alexandros StamatakisView profile
Professor
Prof. Alexandros Stamatakis is a Professor of High Performance Computing at Karlsruhe Institute of Technology (KIT) and Group Leader of the 'Scientific Computing' group at the Heidelberg Institute for Theoretical Studies (HITS). He holds an adjunct professorship at the University of Arizona. His research focuses on algorithms, parallel computing architectures, and evolutionary bioinformatics. Stamatakis earned his PhD in Computer Science from TU Munich (2004) and has held roles including DFG Emmy-Noether Junior Research Group Leader (2008-2010). He is a member of multiple scientific advisory boards, including Elixir Greece and the Computational Biology Institute in Montpellier. His teaching awards (2015, 2016) highlight his contributions to bioinformatics education. His work spans computational methods for phylogenetic analysis, energy-efficient computing, and genomic data processing, with notable tools like RAxML-NG and EPA-ng. Research interests include parallel computing optimizations, phylogenetic inference algorithms, and applications in evolutionary biology. His recent work addresses challenges in large-scale genomic data analysis, including error detection in DNA barcoding systems and accelerating phylogenetic computations through algorithmic innovations. He leads collaborative projects on avian genome complexity and ancient DNA analysis, contributing to both computational methods and biological discoveries. Stamatakis collaborates internationally, with affiliations spanning institutions in Europe and the U.S. His lab at HITS emphasizes interdisciplinary approaches, merging computer science with biological problems. Key contributions include developing carbon-aware energy management frameworks and predictive models for phylogenetic inference stability.




