Find Academic Supervisors

Nicholas EvansView profile

Professor

• Linguistic Typology
• Historical Linguistics
• Contact Linguistics
• +12 more

Nicholas Evans is a Distinguished Professor in the Department of Linguistics at the School of Culture, History & Language, Australian National University. He is an ARC Laureate Fellow and serves as Director of the ARC Centre of Excellence for the Dynamics of Language (CoEDL), reflecting his leadership in integrating typology, descriptive linguistics, and cognitive science. His work spans linguistic diversity, endangered languages, and the interplay between language and culture. His research focuses on Australian and Papuan languages, with extensive fieldwork in remote communities. Key interests include linguistic typology, historical and contact linguistics, semantics, and the cognitive underpinnings of grammar. He has published foundational grammars and dictionaries of Kayardild, Bininj Gun-wok, and Dalabon, contributing significantly to the documentation of endangered languages. His recent publications reveal a strong trend in cross-linguistic studies of social cognition (SCOPIC), syntactic typology, and phylogenetic modeling of the Yam languages. These works integrate linguistic, cognitive, and genetic data, highlighting interdisciplinary approaches to understanding language evolution and human diversity. ARC Laureate Fellow Fellow of the Australian Academy of the Humanities (FAHA) Fellow of the Academy of the Social Sciences in Australia (FASSA) Fellow of the British Academy (FBA) Evans supervises research students and leads major projects such as 'The Wellsprings of Linguistic Diversity' and CoEDL, which involve extensive collaboration across institutions and disciplines. His grants include modeling Pacific creoles and phonemic analysis of Tok Pisin. He is also involved in digital archiving initiatives like PARADISEC and the Language Data Commons of Australia, ensuring long-term preservation of linguistic data. He leads and contributes to research teams focused on Southern New Guinea languages, paradigm syncretisms (PARABANK), and cultural heritage preservation. His work emphasizes reciprocal engagement with speech communities and training the next generation of language documenters.

Nicholas EvansView profile

Professor

• Endangered Languages
• Linguistic Typology
• Historical and Contact Linguistics
• +5 more

Nicholas Evans is Distinguished Professor of Linguistics and Director of the ARC Centre of Excellence for the Dynamics of Language (CoEDL) at the Australian National University’s School of Culture, History & Language. His work bridges fieldwork-based language documentation with theoretical questions in typology, cultural evolution, and social cognition. Focus on endangered Australian and Papuan languages Director of ARC Laureate Project on 'The Wellsprings of Linguistic Diversity' Co-leader of SCOPIC (Social Cognition Parallax Corpus) study Collaborator in global linguistic diversity initiatives His research explores how micro-level community multilingualism shapes macro-level linguistic diversity, with fieldwork spanning seven years in remote Indigenous communities. Recent projects include PARABANK (paradigm syncretism analysis) and Southern New Guinea language studies, particularly Nen and Yam family languages. Scientific recognition includes the Ken Hale Award (Linguistic Society of America), Anneliese Maier Forschungspreis, and fellowships in the Australian Academy of Humanities, Australian Social Sciences Academy, and the British Academy.

Claire BowernView profile

Professor

• Historical Linguistics
• Language Documentation
• Australian Indigenous Languages
• +3 more

Claire Bowern is Professor of Linguistics at Yale University specializing in historical linguistics, language documentation, and Australian Indigenous languages. Her research employs computational phylogenetics to study language evolution and supports language revitalization through digital archives and fieldwork methodologies. Recent publications address: Phylogenetic signal in lexical evolution across language families Digital infrastructure for endangered language documentation (FLEx software analysis) Decolonizing linguistics pedagogy and research practices Her work consistently integrates linguistic, anthropological, and computational approaches to analyze language diversity and change. She contributes to global databases including Grambank and D-PLACE, examining links between linguistic, cultural, and environmental patterns.

Syed Hani Hassan AbidiView profile

Associate Professor

• Virology
• Immunology
• Viral Oncology
• +7 more

Syed Hani Hassan Abidi is an Associate Professor at the Department of Biomedical Sciences , School of Medicine , Nazarbayev University , Kazakhstan. His research integrates virology , immunology , viral oncology , and bioinformatics , with a focus on HIV molecular epidemiology , viral evolution , and drug resistance . He has led international projects across Pakistan, Kenya, Afghanistan, and Kazakhstan, and is recognized for innovative teaching and MOOC development. Education: PhD in Virology and Immunology Research Interests: His laboratory employs bioinformatics (machine learning, AI), genomics , and proteomics to study HIV phylodynamics , viral co-infections , and oncogenic viruses like EBV in prostate cancer. He also explores microbiome-immunity interactions and designs antiviral drugs/vaccines . Recent Research Trends: His 2025 publications emphasize COVID-19 immunopathology , HIV/syphilis epidemiology in Pakistan , and particle physics contributions via ATLAS , showcasing interdisciplinary impact. Awards & Recognition: Outstanding Teachers Award (2019, Aga Khan University) Fellowship of Higher Education (UK, 2022) Teaching & Grants: He pioneered Pakistan’s first MOOC on Computer-Based Drug Discovery (2014) and received a 2022 SoTL grant for MOOC-based molecular biology education. His teaching integrates animations , films , and flipped classrooms . Collaborations & Labs: Leads projects on HIV drug resistance , HCV genomics in Kazakhstan , and AI-driven dementia diagnostics (Kazakh Brain Atlas). His lab collaborates with global institutions to advance viral disease surveillance and therapeutic innovation .

Anna BergeView profile

Professor

• Eskimo-Aleut Linguistics
• Language Documentation
• Language Contact in Prehistory
• +3 more

Anna Berge is a Professor of Linguistics at the University of Alaska Fairbanks, directing the Alaska Native Language Archive. She holds a PhD from the University of California, Berkeley (1997), specializing in the documentation, description, and historical analysis of Eskimo-Aleut languages, particularly Unangam Tunuu (Aleut). Her research integrates linguistics with archaeology, genetics, and environmental studies to explore prehistoric language contact and divergence patterns along the North Pacific Coast. Her work focuses on morphosyntax, discourse analysis, and language revitalization for highly endangered languages. She teaches courses in Morphology, Field Methods, Community Language Documentation, and Eskimo-Aleut Linguistics, emphasizing practical skills for language preservation. Berge's multidisciplinary approach addresses Aleut language divergence from Eskimoan branches, leveraging data from multiple disciplines to reconstruct linguistic prehistory. She actively collaborates with Indigenous communities in Russia, Alaska, Canada, and Greenland to archive linguistic materials and support language maintenance initiatives.

Alexandre Bouchard-CôtéView profile

Professor

• Computational Statistics
• Bayesian Inference
• Monte Carlo Methods
• +4 more

Alexandre Bouchard-Côté is a Professor of Statistics at the University of British Columbia (UBC), affiliated with the Department of Statistics within the Faculty of Science. His research focuses on computational statistics, Bayesian methods, and Monte Carlo techniques, with applications in evolutionary biology, cancer genomics, and computational linguistics. Education : PhD in Computer Science (with Designated Emphasis in Statistics) from UC Berkeley (2010), BSc in Mathematics and Computer Science from McGill University (2005). Affiliations : Director of the Blang probabilistic programming project and leader of the Bouncy Particle Sampler research group. Research Interests : Bouchard-Côté develops scalable Bayesian computational methods, including non-reversible Monte Carlo algorithms like the Bouncy Particle Sampler, and applies these to problems in cancer phylogenetics, evolutionary dynamics, and historical linguistics. His work emphasizes bridging theoretical foundations with practical tools for data science. Publications Trends : Recent work spans distributed sampling frameworks (e.g., Pigeons.jl), variational phylogenetic inference, and cancer clonal evolution modeling. His articles often address algorithmic scalability and interdisciplinary applications in biology and astronomy. Awards : CRM-SSC Prize in Statistics (2024) PIMS-UBC Mathematical Sciences Young Faculty Award (2018) Tweedie New Researcher Award (2016) Advising & Grants : Supervises graduate students (e.g., Son Luu, Nikola Surjanovic) and leads funded projects on distributed MCMC and cancer genomics. Collaborates with institutions like the Simons Foundation and the Canadian Statistical Sciences Institute (CANSSI). Labs/Teams : Core member of the UBC Statistical Machine Learning group, contributing to open-source tools like Blang and the Bouncy Particle Sampler implementation.

• Evolutionary Biology
• Marine Biology
• Taxonomy
• +5 more

Mikael Thollesson is a Senior Lecturer at Uppsala University, affiliated with the Department of Organismal Biology; Systematic Biology and Klubban’s Biological Station. His research focuses on evolutionary biology, phylogenetics, taxonomy, and molecular biology, particularly in marine and freshwater sponges (Porifera), bacterial pathogens, and computational methods in evolutionary analysis. Evolutionary Biology Marine Biology Taxonomy His recent publications highlight trends in sponge biodiversity, phylogeography, bacterial horizontal gene transfer, and mitochondrial gene evolution. Key articles include studies on Swedish demosponge faunas, Silene sect. Arenosae systematics, and computational tools like SPRIT for detecting gene transfers. No explicit awards or grants are mentioned.

Qiaowei PanView profile

Researcher

• Evolutionary Biology
• Molecular Biology
• Genetics
• +7 more

Qiaowei Pan is a Researcher at the University of Lausanne , focusing on Evolution and Ecology . They have held a Guest Researcher role at the Institute of Molecular Biology gGmbH (IMB) in Mainz, Germany since 2023, and a Postdoctoral Researcher position at the University of Lausanne since 2018. Education: PhD in Molecular and Evolutionary Biology (2014-2018), INRAe, University of Rennes II, France Erasmus Mundus Master in Evolutionary Biology (MEME) (2012-2014), University of Groningen (Netherlands) & University of Montpellier II (France) BSc in Biology (2008-2012), University of North Carolina-Chapel Hill, USA Research Interests: Qiaowei Pan's work centers on the intersection of molecular genetics , evolutionary biology , and developmental biology , particularly in sex determination mechanisms across diverse animal models. Their studies span non-coding RNA regulation , sex chromosome evolution , and signal transduction pathways like TGF-β in reproductive systems. Publication Trends: Recent articles highlight expertise in sex determination systems (5/12 publications), genomic approaches (6/12), and fish developmental evolution . Collaborative work includes computational methods ( RADSex workflow ) and comparative studies across ant , goldfish , catfish , and cavefish models. Labs & Teams: Currently affiliated with the Keller-Valsecchi group at IMB and the Department of Evolution and Ecology at the University of Lausanne.

Benedict KingView profile

Researcher

• Phylogenetic Analysis
• Evolutionary Biology
• Paleontology
• +4 more

Benedict King is a postdoctoral researcher in the Department of Linguistic and Cultural Evolution at the Max Planck Institute for Evolutionary Anthropology, where he contributes to the Comparative Oceanic Linguistics (CoOL) team. His research focuses on constructing phylogenetic trees of language relationships using Bayesian methods to explore language origins, spread, and evolutionary dynamics. He holds a BA in Natural Sciences from the University of Cambridge (UK), a PhD in Evolutionary Biology from Flinders University (Australia), and previously worked as a Postdoctoral Research Associate at Naturalis Biodiversity Center (Netherlands). King’s research interests bridge evolutionary biology, paleontology, and linguistics. He investigates evolutionary transitions in early vertebrates (e.g., placoderms, coelacanths) and applies computational models to study language evolution. His work emphasizes improving phylogenetic methodologies and integrating fossil evidence with statistical frameworks. Notable projects include analyzing Philippine language migrations and reconfiguring actinistian phylogenies through Devonian fish fossils. His publications reflect interdisciplinary strengths, combining vertebrate paleontology with linguistic phylogenetics. Recent work supports rapid Austronesian expansions and hybrid Indo-European language origins. Awards include the Oxford University Press Prize for Biosciences and recognition for his PhD publication. King actively engages in public science communication through platforms like The Conversation and GitHub repositories.

Itsik Pe'erView profile

Professor

• Human Genetics
• Computational Biology
• Genomics
• +3 more

Itsik Pe'er is a Full Professor and Vice-Chair in the Department of Computer Science at Columbia University's Fu Foundation School of Engineering & Applied Science, and holds a joint appointment as Professor of Systems Biology at the Vagelos College of Physicians and Surgeons. His research focuses on computational methods in human genetics, including genetic variation analysis, disease association studies, and algorithm development for genomic data. He leads the Itsik Pe'er Lab of Computational Genomics, which develops tools like Xplorigin, Germline, and SEACells to address challenges in genomics and medical research. His work spans machine learning applications in healthcare, microbiome analysis, and cancer genomics. Notable contributions include studies on hypertensive disorders in pregnancy, bias correction in predictive models, and the development of non-Euclidean learning libraries like Manify. Pe'er has advised students including Vladimir Vacic, Anat Kreimer, and Arthi Ramachandran, and collaborates on grants addressing genetic epidemiology and computational biology. His lab's location is in the Computer Science Building at Columbia's Morningside Campus.

Lourdes Pena-CastilloView profile

Professor

• Bioinformatics
• Genomics
• Machine Learning
• +5 more

Dr. Lourdes Pena-Castillo is a Professor jointly appointed in the Departments of Computer Science and Biology at Memorial University of Newfoundland's Faculty of Science. Her research focuses on applying machine learning and bioinformatics to study bacterial gene regulation, with emphasis on transcriptomics, gene expression pathways, and microbiology. She leads the Bioinformatics Lab at MUN, developing computational tools like Promotech for promoter prediction and sRNARFTarget for sRNA target identification. Education: BSc in Information Systems Engineering, ITESM-Mexico MSc in Computer Science, University of Alberta PhD in Computer Science (Doktoringenieurin), Otto-von-Guericke Universität Magdeburg Postdoc in Bioinformatics, University of Toronto Research Interests: Bioinformatics, Genomics, Machine Learning, Artificial Intelligence, Transcriptomics, Gene Regulation, Microbiology Her work integrates computational methods with biological data to address challenges in molecular biology, including analyzing bacterial sRNA functions, promoter recognition, and disease diagnostics using machine learning. She has advised numerous graduate students, including PhD candidates Purvikalyan Pallegar and Bonita McCuaig, and MSc students like Ruben Chevez-Guardado and Kratika Naskulwar. Her lab focuses on translational research with applications in both basic science and clinical contexts. Publications span computational methods for bacterial gene regulation, bioinformatics tool development, and interdisciplinary projects in VR and healthcare informatics. Her research has contributed to understanding symbiotic relationships in marine organisms, inflammatory bowel disease diagnostics, and clavulanic acid production in Streptomyces. Grants & Collaborations: Works with interdisciplinary teams across computer science and biology, supported by grants enabling projects in bacterial genomics and computational tool development. Labs & Teams: Leads the Bioinformatics Lab at MUN, fostering collaborations with researchers in microbiology, computer science, and healthcare.

Corrie MoreauView profile

Professor

• Evolutionary Patterns and Processes
• Organismal Biology
• Plant-animal Interactions
• +13 more

Corrie Moreau is the Martha N. & John C. Moser Professor of Arthropod Biosystematics and Biodiversity at Cornell University, serving as Director & Curator of the Cornell University Insect Collection. She holds affiliations with the Department of Ecology and Evolutionary Biology and the College of Arts and Sciences. Her research focuses on symbiotic factors driving speciation, adaptation, and diversification in insects, particularly ants. Moreau’s work integrates molecular methods, next-generation sequencing, and field-based research to study biodiversity across scales. Education: Ph.D. in Organismic and Evolutionary Biology from Harvard University (2007), M.Sc. in Biology from San Francisco State University/California Academy of Sciences (2003), B.S. in Biology from San Francisco State University (2000). Research Interests: Evolutionary patterns/processes, organismal biology, plant-animal interactions, chemical ecology, sustainability, and microbiome dynamics. Her lab (Moreau Lab) investigates ant-microbe symbioses, host-microbe interactions, and the role of symbioses in macroevolutionary processes. Recent work includes studies on ant phylogenetics, gut microbiome evolution, and the impact of invasive species on native ecosystems. Publications highlight her contributions to understanding ant evolution, microbial symbiosis, and biogeography. Grants include NSF-funded projects on ant genomics and symbiosis. She advocates for natural history collections and their role in biodiversity research and education.

Finlay MaguireView profile

Assistant Professor

• Genomic Epidemiology
• Health Data Science
• Bioinformatics
• +7 more

Finlay Maguire is an Assistant Professor jointly appointed in the Faculty of Computer Science and the Department of Community Health & Epidemiology at Dalhousie University. He leads the Maguire Lab, which develops data-driven methods to address health and social crises through genomic epidemiology and interdisciplinary health data science. He is also affiliated with the Shared Hospital Laboratory, Sunnybrook Research Institute, and multiple national and international public health consortia including PHA4GE, CanCOGeN, and IRIDA. PhD: University College London / Natural History Museum (2016) MA: University of Oxford (2011) Donald Hill Family Fellowship, Dalhousie University (2021) Dr. Maguire's research focuses on two main areas: genomic epidemiology of infectious diseases and interdisciplinary health data science collaborations . His work in genomic epidemiology includes developing bioinformatics and machine learning tools to study antimicrobial resistance (AMR) and SARS-CoV-2 dynamics, often in collaboration with public health agencies. His broader health data science work addresses issues such as online radicalization, healthcare access for refugees, and autism-related language use, combining computational methods with social science. His recent publications (2023–2025) reflect a strong trend in pathogen genomics , AMR , zoonotic spillover , and computational social science . He has published on novel coronaviruses in bats, SARS-CoV-2 animal models, invasive Group A Streptococcus, and sociological analyses of incel communities. Much of this work involves tool development (e.g., ArgNorm, Pathoplexus) and data standardization (e.g., PHA4GE metadata standards). Finalist, 2024 Discovery Awards (Emerging Professional) 2023 President’s Research Excellence Award for an Emerging Investigator, Dalhousie Finalist, 2023 Discovery Awards (Emerging Professional) Funding from CIHR, NSERC, Genome Canada, SSHRC, BMGF Dr. Maguire actively mentors graduate students and postdocs, including PhD candidates in Computer Science and MSc students in Community Health & Epidemiology. He has secured major training grants such as the CIHR Health Research Training Platform and the Canadian One Health Training Program for Emerging Zoonoses. He also contributes to capacity-building initiatives like MicroResearch in Ghana and Kenya. The Maguire Lab is embedded in a rich network of collaborations, including the CARD database, Public Health Agency of Canada, Canadian Food Inspection Agency, and Sunnybrook Health Sciences Centre. The lab emphasizes open science, reproducible research, and interdisciplinary training, as seen in the development of open-source tools and participation in international consortia.

Karoline FaustView profile

Associate Professor

• Microbial community dynamics
• Microbial systems biology
• Bioinformatics
• +6 more

Karoline Faust is an Associate Professor at KU Leuven, affiliated with the Laboratory of Molecular Bacteriology (Rega Institute) and the Faculty of Medicine . She contributes to the iSi Health and Leuven One Health institutes, and serves on senior academic councils. Her research spans microbial systems biology, focusing on community dynamics and network analysis. Education: PhD in bioinformatics (2010, KU Leuven) Affiliations: KU Leuven, ISME Journal editorial board, Belgian Society for Microbiology Her research investigates microbial community dynamics , systems biology approaches to microbiomes, and bioinformatics tool development . She specializes in modeling human gut microbiota , synthetic microbial communities , and environmental microbiomes (e.g., microplastic impacts on Daphnia microbiomes). Her work integrates metabolic modeling , network analysis , and experimental systems to understand microbial interactions. Recent publications highlight her contributions to microbial network inference , 16S rRNA sequencing protocols , microfluidics , and ecological modeling of microbiomes. She develops tools like manta , miaSim , and CoNet to analyze community structures. Teaching: Karoline co-teaches courses in microbiology, bioinformatics, and network analysis at KU Leuven, and has contributed to international workshops on microbial network inference. Scientific Engagement: She serves as Senior Editor at ISME Journal and Secretary of the Belgian Society for Microbiology .

Xiang JiView profile

Assistant Professor

• Statistical Phylogenetics
• Bioinformatics
• Viral Evolution
• +3 more

Xiang Ji is an Assistant Professor in the Department of Mathematics at Tulane University, affiliated with the School of Science & Engineering. His research focuses on statistical phylogenetics, computational biology, and bioinformatics, particularly in viral evolution and genomic epidemiology. He collaborates with Dr. Wu-Min Deng on cancer biology research from a bioinformatics perspective. Education: Ph.D., 2017: Bioinformatics and Statistics (Co-Major), North Carolina State University M.S., 2013: Material Science and Engineering, North Carolina State University B.S., 2011: Economics (Double Major) and Physics, Peking University Research Interests: Dr. Ji develops statistical models and computational tools for phylogenetic analysis, including scalable algorithms for large-scale genomic data. His work spans viral evolution, zoonotic disease surveillance, and parallel computing libraries for Bayesian inference. He emphasizes practical implementations such as Torchtree and TreeFlow . Articles Trends: Recent publications emphasize viral evolution dynamics (e.g., SARS-CoV-2, avian influenza), genomic surveillance strategies, and computational methods for phylogenetic inference. His work often bridges statistical theory with real-world applications in public health and epidemiology. Advising & Grants: While specific grant details are not listed, his active research program indicates involvement in funding initiatives related to computational biology and viral evolution. He teaches advanced courses in data analysis, linear models, and probability theory. Labs & Teams: Collaborates with Tulane’s Cancer Biology group and maintains partnerships with institutions globally, focusing on genomic epidemiology and phylogenetic software development.