Find Academic Supervisors

• Microbiology
• Immunology
• Bacterial Vaccines
• +5 more

James B. Kaper is a Professor and Chair of the Department of Microbiology & Immunology at the University of Maryland School of Medicine. He serves as Vice Dean for Academic Affairs and previously held leadership roles as Senior Associate Dean (2014–2019) and Chair (2007–present). His research focuses on the molecular pathogenesis of diarrheagenic Escherichia coli and Vibrio cholerae , including vaccine development and bacterial-host interactions. Education: BS (1973) and PhD (1979) in Microbiology from University of Maryland; Postdoc in Molecular Pathogenesis at University of Washington (1979–1981) Dr. Kaper’s work has led to the creation of live attenuated cholera vaccines, including CVD 103-HgR, the first licensed recombinant bacterial vaccine. His lab investigates bacterial genetics, intestinal colonization, and immune system activation, particularly TLR5 response to V. cholerae flagellin. He has authored 303 peer-reviewed articles and 68 book chapters. His research has been funded continuously by NIAID since 1982. Key publications include foundational work on V. cholerae vaccines (1984), genomic structure (1998), and quorum sensing in EHEC/EPEC (1999). His lab’s recent studies focus on phosphotyrosine proteomics (2013) and pathogenicity island regulation (2007). Scientific awards: Fellow, American Academy of Microbiology (1994); NIH Merit Award (2004); ASM DC White Award (2019) Editorial roles: Editor-in-Chief, EcoSal (2006–present); Associate Editor, International Journal of Medical Microbiology (2000–present) As an academic leader, Dr. Kaper has mentored over 60 graduate students and postdoctoral fellows. He holds multiple patents for cholera vaccines and E. coli diagnostics, including U.S. Patents 4,935,364; 5,399,494; and 6,204,004. His lab at UMSOM combines basic science with translational applications for enteric disease prevention.

• Machine Learning
• Genomics
• Gene Regulatory Networks
• +3 more

Sushmita Roy is a Professor at the University of Wisconsin–Madison, affiliated with the Department of Computer Sciences and the College of Letters and Science. Her research focuses on developing computational methods in statistical machine learning to understand gene regulatory networks in living cells, particularly under environmental, developmental, disease, and evolutionary contexts. She explores bulk and single-cell genomic data integration to study processes like cell fate specification, host-microbe interactions, and diseases such as cancer and neurodevelopmental disorders. Her work emphasizes three key areas: inference of genome-scale transcriptional networks, evolutionary analysis of regulatory networks, and 3D genome organization dynamics. Roy’s lab collaborates across disciplines, leveraging genomic data from plant and mammalian systems. She has contributed to methodologies for analyzing chromatin accessibility, single-cell profiling, and network-based models of pathogen systems. Her affiliations include Wisconsin Institutes for Discovery, and she is a leader in computational biology and systems genomics research.

Waldemar KolanusView profile

Professor

• Molecular Immunology
• Cell Signaling
• Signal Transduction Pathways
• +4 more

Prof. Waldemar Kolanus leads the Molecular Immunology and Cell Biology department at the University of Bonn's Life & Medical Sciences Institute (LIMES) . His research bridges immunoregulation , stem cell dynamics , and metabolic stress responses in immune cells. Unit 2 member at LIMES Principal investigator in SFB 704 and ImmunoSensation Cluster Leads a multidisciplinary lab with postdocs, PhD students, and technical staff His work focuses on intracellular signaling pathways connecting immune activation to tissue homeostasis, particularly through: Cytohesin proteins in integrin-mediated adhesion and migration TRIM71 in stem cell regulation and congenital hydrocephalus High-salt environments affecting macrophage function Publication trends show expertise in immune cell migration , genetic models , and chemical inhibition , with frequent use of mice and zebrafish for in vivo studies. Key articles explore: TRIM71's dual role in auditory development and germ cell maintenance Cytohesin family's Golgi regulation and insulin signaling Ruxolitinib's off-target migration inhibition of dendritic cells Contact details: Address: LIMES Institute, Carl-Troll-Straße 31, Bonn Email: kolanus.sekretariat@uni-bonn.de Phone: +49 228 73-62788

Trent K. BollingerView profile

Professor

• Wildlife Disease Pathology
• Epidemiology
• Chronic Wasting Disease
• +3 more

Trent K. Bollinger is a Professor in the Department of Veterinary Pathology at the University of Saskatchewan's Western College of Veterinary Medicine (WCVM), and serves as Regional Director for the Western/Northern Region of the Canadian Wildlife Health Cooperative (CWHC). His academic credentials include a BSc (Honours) from the University of Saskatchewan (1984), a DVM (Distinction) from the University of Saskatchewan (1988), and a DVSc in Pathology from the Ontario Veterinary College (1992). Dr. Bollinger's research focuses on the pathology and epidemiology of diseases in wildlife and fish, with particular emphasis on chronic wasting disease in deer/elk and white-nose syndrome in bats. He has conducted extensive studies on disease transmission dynamics, wildlife population health, and the ecological impacts of emerging pathogens. His work bridges veterinary science, ecology, and conservation biology. His publications demonstrate expertise in viral and bacterial zoonoses, fungal pathogens affecting bats, and spatial epidemiology of wildlife diseases. Recent research highlights include investigating sylvatic plague in prairie dogs, coronavirus persistence in hibernating bats, and landscape connectivity's role in chronic wasting disease spread. His studies often combine molecular diagnostics, field observations, and ecological modeling. Dr. Bollinger collaborates with national and international wildlife agencies, contributing to disease surveillance and management strategies for endangered species. His work emphasizes the interconnectedness of wildlife health, ecosystem health, and public health concerns.

• Nuclear Magnetic Resonance (NMR)
• In vivo imaging
• MRI pulse sequence development
• +7 more

Professor Guy Williams is a leading academic at the University of Cambridge with a focus on imaging science and clinical neurosciences, affiliated with Downing College and the Wolfson Brain Imaging Centre . Holding a PhD in Physics from his initial Natural Sciences degree, he specializes in nuclear magnetic resonance (NMR) and MRI techniques for brain imaging. Education: BA, PhD in Physics His research centers on non-invasive imaging of brain structure and function, particularly in traumatic brain injury (TBI) and dementia. His work involves developing novel MRI pulse sequences and advanced data analysis algorithms, including AI-based diagnostic tools. He leads studies on white matter integrity post-trauma, longitudinal dementia assessment, and applications of MRI in disorders of consciousness and addiction. Recent publications highlight collaborations in traumatic brain injury outcomes, AI-guided dementia prediction, and neuroimaging of post-COVID cognitive deficits. His team's work on ultra-high field laminar fMRI and distortion correction methods has advanced clinical neuroscience applications. Key techniques include diffusion tensor imaging (DTI), 7 Tesla MRI, and positron emission tomography (PET/MR). His research spans from basic NMR physics to clinical translation, with a strong emphasis on multi-site studies and real-world diagnostic implementation.

• Behavioral Ecology
• Evolutionary Biology
• Population Ecology
• +11 more

Prof. Dr. Oliver Krüger is a behavioral ecologist and evolutionary biologist at Bielefeld University 's Faculty of Biology , where he leads the Department of Animal Behaviour since 2013. His research spans avian and marine mammal systems, focusing on life history strategies, parasite-host interactions, and environmental adaptation. Education: Biology studies at Bielefeld University (1994-1996) MSc in Oxford (1996-1997) PhD at Bielefeld University with Fritz Trillmich and Jan Lindström (1998-2000) Research Themes: Behavioral ecology, evolutionary biology, and population dynamics across tropical and temperate ecosystems. Key projects include NC³ (Niche Choice/Construction) and studies on Galápagos sea lions, common buzzards, and pinniped species. Scientific Leadership: Spokesperson, SFB TRR 212 "NC³" (2018-2025) Advisory Board member: German Ornithologists Union, IUCN SSC pinniped group, German Primate Centre Peer review roles: Humboldt Foundation, DFG, HFSP, NSF Awards: Leopoldina Prize (2001) Niko Tinbergen Award (2008) DFG Heisenberg Professorship (2010-2015)

Anil KumarView profile

Assistant Professor

• Molecular Virology
• Virus-host Interactions
• Innate Immune Response
• +3 more

Dr. Anil Kumar is an Assistant Professor in the Department of Biochemistry, Microbiology & Immunology at the University of Saskatchewan's College of Medicine. He specializes in molecular virology, focusing on positive-stranded RNA viruses and their interactions with host immune systems. His research employs high-throughput genetic screens and reverse genetics systems to identify host factors critical for viral infection. Education includes a BSc in Agricultural Sciences (1999, Kerala Agricultural University), MSc in Plant Pathology (2001, Indian Agricultural Research Institute), and PhD in Molecular Virology (2010, University of Heidelberg). Postdoctoral training included stints at the University of Heidelberg (2010–2013) and the University of Alberta (2014–2020). Research interests center on Eastern Equine Encephalitis virus (EEEV) and Enterovirus D68 (EV-D68). For EEEV, his lab investigates immune evasion mechanisms and host-virus protein interactions to identify therapeutic targets. For EV-D68, they study CNS invasion mechanisms and novel host dependency factors linked to acute flaccid myelitis (AFM). Recent work includes studies on SARS-CoV-2, uncovering roles for host proteins like Argonaute 2 in viral restriction. His lab integrates molecular biology, virology, and systems biology approaches, with a focus on translational research for antiviral drug development. Collaborations include work on respiratory syncytial virus (RSV) entry mechanisms and dengue virus replication regulation.

Brian HieView profile

Assistant Professor

• Machine Learning
• Computational Biology
• Protein Engineering
• +6 more

Brian Hie is an Assistant Professor of Chemical Engineering at Stanford University , a Dieter Schwarz Foundation Stanford Data Science Faculty Fellow , and an Innovation Investigator at Arc Institute . He leads the Laboratory of Evolutionary Design , focusing on the intersection of biology and machine learning . His prior roles include a Stanford Science Fellow in the Stanford University School of Medicine and a Visiting Researcher at Meta AI . Education: Ph.D. , Electrical Engineering and Computer Science , Massachusetts Institute of Technology (2021) Bachelor’s Degree , Stanford University Research Interests: Brian’s work bridges machine learning and computational biology , with a focus on protein engineering , single-cell RNA sequencing , and viral evolution . His Evolutionary velocity framework predicts protein evolutionary dynamics across timescales, while his Scanorama algorithm enables efficient integration of heterogeneous single-cell datasets. He also develops structure-informed language models for antibody optimization and uncertainty-aware ML for biological discovery. Publication Trends: His recent work (2023) emphasizes structure-based inverse folding for antibody evolution, evolutionary scale modeling , and unsupervised optimization . Earlier studies (2022-2021) cover evolutionary velocity , multi-modal single-cell analysis , and viral escape prediction using natural language analogies. Scientific Awards: Stanford Science Fellow (2021) National Defense Science and Engineering Graduate Fellowship (2019) Advising: He mentors doctoral students including Brandon Ameglio , Garyk Brixi , and Chang M. Yun , with a focus on biological design and computational methods . Labs & Collaborations: His lab collaborates with Bio-X and the Institute for Human-Centered Artificial Intelligence (HAI) , and he maintains affiliations with Sarafan ChEM-H and Stanford Data Science .

Michael BaymView profile

Associate Professor

• Microbial Evolutionary Genomics
• Antibiotic Resistance
• Computational Biology
• +7 more

Dr. Michael Baym is an Associate Professor of Biomedical Informatics at Harvard Medical School with affiliate appointments in Microbiology and the Laboratory of Systems Pharmacology, and as an Associate Member of the Broad Institute. He leads the Baym Lab, which studies microbial evolutionary genomics and antibiotic resistance through a hybrid of experimental, computational, and theoretical approaches. His research focuses on: Antibiotic Resistance Evolution and practical interventions Mobile Genetic Elements (plasmids, phages, transposons) Computational Genomic Algorithms for big data analysis Synthetic Biology tools and technologies Key recent publications explore phage discovery systems , phylogenetic compression of microbial genomes, and RNA-guided gene drives in plasmids. His work is supported by multiple NIH/NIGMS and NSF grants including a MIRA award. Scientific honors include: Packard Fellowship (2018) Pew Biomedical Scholarship (2020) Sloan Research Fellowship (2020) A. Clifford Barger Excellence in Mentoring Award (2021) SSQBio Mentorship Award (2022) The lab actively trains PhD students and postdoctoral fellows with alumni occupying academic and industry positions globally. Current team members include researchers from interdisciplinary backgrounds working at the intersection of experiment, computation, and theory .

• Genomics
• Malaria Research
• Parasitology
• +3 more

David Serre is a Professor in the Department of Microbiology and Immunology at the University of Maryland School of Medicine, with an additional appointment at the Institute for Genome Sciences. His research focuses on developing genomic approaches to study eukaryotic pathogens, particularly Plasmodium vivax, the leading cause of malaria outside Africa. His laboratory investigates parasite responses to antimalarial drugs, host immune responses, and mosquito vector biology using genomic and transcriptomic techniques. Education 1997–2000: Engineering degree in Chemistry, École Nationale Supérieure de Chimie, Montpellier, France 2000–2004: PhD in Biology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany 2004–2007: Postdoctoral fellowship, McGill University and Genome Quebec Innovation Centre, Montreal, Canada Research Focus Dr. Serre’s work integrates genomics to study Plasmodium vivax’s drug resistance, relapse mechanisms, and interactions with hosts and vectors. Key areas include: Genomic assays to characterize parasite drug responses Transcriptomic analysis of host immune responses Genomic studies of Anopheles mosquitoes as malaria vectors Recent Trends in Publications Recent work highlights genomic and transcriptomic approaches to dissect Plasmodium vivax biology, including: Single-cell RNA sequencing to resolve transcript isoforms and stage-specific expression Analysis of relapse dynamics and drug resistance mechanisms Microbiome studies in mosquitoes and environmental contexts Grants & Advising No explicit grants or advisee names are listed in the provided text. Collaborators include institutions like the Max Planck Institute, McGill University, and the Institute for Genome Sciences. Labs & Teams His lab is affiliated with the University of Maryland School of Medicine and the Institute for Genome Sciences, focusing on genomic and molecular approaches to infectious diseases.

Gary BrewerView profile

Professor

• Field Crops Entomology
• Insect Ecology
• Insect Pest Management
• +3 more

Dr. Gary Brewer is a Professor in the Department of Entomology at the University of Nebraska-Lincoln, with a 60% research and 40% teaching appointment. He has served as department head at NDSU (1997-2006) and UNL (2006-2018). His research focuses on field crops entomology, IPM of pasture cattle flies, salt creek tiger beetle conservation, and pollinator health. He has pioneered a push-pull strategy using coconut oil-derived repellents and led curriculum design for Rwanda’s Conservation Agriculture program. Education: B.S. in Zoology, University of Nebraska-Lincoln (1974) M.S. in Entomology, University of Nebraska-Lincoln (1978) Ph.D. in Entomology, Kansas State University (1984) Research Interests: Brewer’s work spans insect ecology, pest management, and conservation. Key areas include stable fly and horn fly control, pollinator protection, and endangered species recovery (e.g., Salt Creek tiger beetle). His lab develops natural product-based pest repellents and evaluates biopesticides for sustainable agriculture. Grants & Contributions: $362,150 USDA grant for undergraduate research in beneficial insect protection (2018) $325,000 USDA grant for multi-tactic stable fly control (2017) NE Game and Parks funded salt creek tiger beetle reintroduction programs Labs & Teams: Brewer’s team collaborates with industry (e.g., Vestergaard Frandsen) and international partners to advance IPM strategies. His work bridges field research with applied solutions for farmers and conservationists.

Jeff SchoreyView profile

Professor

• Microbiology
• Immunology
• Infectious Diseases
• +9 more

Jeff Schorey is the George B. Craig Jr. Professor and a full Professor in the Department of Biological Sciences at the University of Notre Dame, where he has been a faculty member since 2004. He currently serves as Director of the Integrated Biomedical Sciences (IBMS) graduate program and previously held leadership roles including Chair of the Institutional Animal Care and Use Committee (IACUC) and Associate Director of the Eck Institute for Global Health. His research focuses on the pathobiology of mycobacterial diseases, particularly Mycobacterium tuberculosis and M. avium . His work investigates the molecular interactions between mycobacteria and host macrophages, with a special emphasis on the role of exosomes in immune modulation, diagnostics, and vaccine development. He also explores novel antibiotic development in collaboration with chemists at Notre Dame and global partners. His recent publications reveal a strong trend in extracellular vesicle biology, host-pathogen signaling, and translational applications in TB diagnostics and treatment. The articles span immunology, microbiology, and molecular biology, with recurring themes in exosome function, RNA sensing, and antimicrobial development. George B. Craig Jr. Collegiate Professor Dr. Schorey has advised graduate students and leads an active research lab focused on mycobacterial pathogenesis. His work is supported by collaborations across disciplines and institutions, particularly in drug development and clinical translation. He has contributed significantly to understanding how exosomes can serve as both biomarkers and therapeutic tools. His lab employs cellular immunology, animal models, and clinical sample analysis to study mycobacterial infections. He leads the IBMS program, shaping graduate education in biomedical sciences at Notre Dame.

• Veterinary Parasitology
• Ecology of Parasites
• Ectoparasites
• +4 more

Ivan G. Horak is a renowned researcher at the University of Pretoria , with significant affiliations at institutions like Rhodes University , ClinVet International , and Bayer Pty Ltd . His career spans over four decades, focusing on veterinary parasitology , ectoparasites , and host-parasite interactions in wildlife and livestock. Research Interests : Horak's work explores the dynamics of parasite ecology , pathogen transmission , and parasite-host relationships , particularly in South African ecosystems . He has published extensively in journals like Experimental and Applied Acarology and Parasites and Vectors , analyzing tick species, helminths, and their ecological implications. Collaborations & Sponsorships : His research has been supported by prestigious bodies such as the National Research Foundation , National Institutes of Health , and the National Institute of Allergy and Infectious Diseases . He has held visiting positions at Georgia Southern University and Wake Forest University . Labs & Teams : Horak has worked with key institutions like the Onderstepoort Veterinary Institute , University of the Free State , and Stellenbosch University , contributing to multi-country studies in Namibia , Zambia , Mozambique , and Zimbabwe .

Michael Z. LevyView profile

Professor

• Vector-Borne Diseases
• Urban Epidemiology
• Zoonotic Diseases
• +6 more

Michael Z. Levy is a Professor of Epidemiology in the Department of Biostatistics and Epidemiology at the University of Pennsylvania Perelman School of Medicine. He co-directs the University of Pennsylvania/Universidad Peruana Cayetano Heredia Zoonotic Disease Research Laboratory in Arequipa, Peru, and holds secondary affiliations with the Center for Clinical Epidemiology and Biostatistics, Center for Public Health Initiatives, History and Sociology of Science, and Latin American and Latinx Studies. His research spans interdisciplinary domains including vector-borne diseases, computational biology, urban ecology, and social justice. Education: B.A. in Philosophy and Biology from Amherst College (1998), PhD in Population Biology, Ecology, and Evolution from Emory University (2007). Levy's work focuses on urban zoonotic diseases , particularly Chagas disease and canine rabies , integrating ecology, epidemiology, and computational methods. He investigates how insect vectors interact with social systems, housing policies, and climate change, extending to pandemic modeling during the Covid-19 crisis. His research group (28 members) collaborates with Peruvian Ministry of Health to control Chagas and rabies outbreaks in Arequipa. Notable contributions include novel geospatial surveillance models , behavioral economics applications for vector control, and bed bug epidemiology linking infestations to public health challenges. Recent publications highlight 2025-2024 trends in Chagas vector dynamics , zoonotic rabies control , vaccine strategies , and genomic outbreak analysis , emphasizing interdisciplinary approaches to urban disease ecology. He has participated in cluster randomized trials and behavioral design studies to improve community engagement in vector control campaigns in Peru, focusing on incentive mechanisms and surveillance equity . The Zoonotic Disease Research Lab in Arequipa employs interdisciplinary methods combining biological research , social science , and computational modeling to address urban disease transmission.

William John MossView profile

Professor

• Infectious diseases
• Vaccine-preventable diseases
• Infectious disease epidemiology
• +7 more

William John Moss is a Professor in the Department of Epidemiology at the Johns Hopkins Bloomberg School of Public Health, where he also holds joint appointments in International Health and Molecular Microbiology and Immunology. He serves as Executive Director of the International Vaccine Access Center (IVAC) and Deputy Director at the Johns Hopkins Malaria Research Institute. His work spans multiple centers including the Center for Global Health, Center for Humanitarian Health, and Johns Hopkins Vaccine Initiative. Dr. Moss earned his MD from Columbia University in 1984 and his MPH in 1995. As a pediatrician with subspecialty training in infectious diseases, he has conducted extensive field research across multiple countries including Ethiopia, Kenya, South Africa, Zambia, Zimbabwe and India. His research focuses on the epidemiology and control of childhood infections in resource-poor settings, with particular emphasis on measles-HIV interactions, malaria transmission in southern Africa, serosurveillance for immunization programs, and care of HIV-infected children in rural Zambia. His recent work (2024-2025) demonstrates continued focus on measles epidemiology, malaria transmission dynamics, and vaccine implementation research, with numerous publications examining immunity gaps, human mobility patterns, and malaria vector biology in African settings. Scientific Awards: Wyeth-Lederle Vaccines and Pediatrics Young Investigator Award in Vaccine Development (1999-2001) Gustave J. Martin Innovative Research Fund Fellow (2001) Advising, Mentoring and Teaching Recognition Award (2007-2008) Dr. Moss leads multiple research projects including studies on HIV-infected children's immune reconstitution, malaria transmission dynamics in southern Zambia, and strengthening immunization systems through serosurveillance. His work bridges clinical medicine, epidemiology, and public health policy to address critical challenges in global infectious disease control.