Find Academic Supervisors

• Molecular microbiology
• RNA biology
• Bacterial pathogenesis
• +4 more

Jens Sivkær Pettersen is a Postdoctoral Researcher at the Department of Biochemistry and Molecular Biology , University of Southern Denmark, with guest researcher status at Karolinska Institute, Odense University Hospital. His work focuses on molecular microbiology, particularly RNA-mediated regulation in bacterial pathogens. Education : PhD in RNA biology of Streptococcus pneumoniae (2023) Key collaborations : Jakob Møller-Jensen, Morten G. Jørgensen, Tobias E. Andersen Research interests span bacterial pathogenesis, regulatory networks, RNA biology, and host-environment interactions. Recent studies explore: Pneumococcal adaptation to human bodily fluids RNA regulatory mechanisms in Gram-positive pathogens Antimicrobial properties of marine compounds Two-component signal transduction systems Publications (2020-2024) reveal expertise in: Streptococcus pneumoniae pathogenesis Uropathogenic E. coli surface dynamics Bioinformatic analysis of regulatory elements RNA-based virulence control

• Ophthalmology
• Stem Cell Research
• Genomics
• +2 more

Ajeet Singh serves as a Postdoctoral Associate within the Department of Ophthalmology at Baylor College of Medicine, focusing on translational vision research and genomic medicine. His primary research domains include: Ophthalmology, with specialized expertise in age-related macular degeneration (AMD) pathogenesis Stem Cell Research utilizing patient-derived induced pluripotent stem cells (iPSCs) for retinal disease modeling Genomics and Bioinformatics approaches to inherited retinal disorders Plant Genomics (historical focus) involving non-coding RNA analysis and database development Publication analysis reveals a strategic research evolution: from 2018-2022, Singh developed multiple plant genomics databases (PtRNAdb, PtncRNAdb, PVsiRNAdb) studying tRNA-derived fragments and fusion transcripts. Since 2023, his work pivoted sharply toward ophthalmology, generating iPSC models for AMD using patient samples and twins discordant for the disease, while integrating multiomic data to identify disease modules. This transition demonstrates exceptional adaptability across biological domains. No scientific awards were documented in available sources. Academic mentoring activities and grant funding details remain unreported in current institutional profiles. Dr. Singh operates within Baylor College of Medicine's Ophthalmology department infrastructure, though specific laboratory affiliations or collaborative networks aren't detailed in public listings.

Andrew SharkeyView profile

Lecturer

• Reproductive Biology
• Maternal-Fetal Interaction
• Immunology
• +12 more

Dr. Andrew Sharkey is a Lecturer in the Department of Physiology, Development and Neuroscience at the University of Cambridge. He is a member of the Centre for Trophoblast Research and contributes to interdisciplinary research on maternal-fetal interactions, particularly focusing on implantation, placental development, and immune system modulation during pregnancy. Affiliation: Centre for Trophoblast Research, University of Cambridge Teaching: Part 2 course on implantation and early development, supervision in Reproductive Sciences for pre-clinical medicine, histopathology demonstrator His research spans molecular mechanisms of embryo-endometrial interactions, novel contraceptive strategies, and the role of genetic and immune factors in pregnancy complications such as pre-eclampsia, miscarriage, and stillbirths. Key specialities include Immunology , Infertility , and Maternal-Fetal Compatibility . Analysis of his publications reveals a focus on NK cell receptors (e.g., KIR2DS4, KIR2DS1), HLA-G and HLA-C interactions, DNA methylation in placental aging, and endometrial gene regulation. These works bridge immunology, reproductive medicine, and epigenetic mechanisms. Teaching roles include lecturing on implantation and early development, supervising the Endocrinology and Reproductive Sciences module for pre-clinical medicine, and demonstrating histopathology practicals. His keywords highlight expertise in Contraception , Genetics , and Pregnancy Complications .

Eyal MaoriView profile

Research Fellow

• RNA Biology
• Social Immunity
• Epigenetic Communication
• +3 more

Dr. Eyal Maori (University of Cambridge) is a Sir Henry Dale Fellow at the Department of Biochemistry, focusing on RNA communication between organisms. His research explores RNA interconnections in infection, immunity, and genome dynamics, particularly studying RNA transfer between honeybees and its implications for social immunity and epigenetic communication. Key research areas include Establishing methods to study natural RNA transmission in honeybees Characterizing transmissible RNA in recipient honeybees Investigating RNA-primed social immunity across generations Assessing transmissible RNA effects on honeybee physiology and behavior His group employs RNA biochemistry techniques, imaging, and high-throughput sequencing to define RNA transfer mechanisms between cells and organisms. This work aims to develop tools for studying RNA transmission biology across systems, with applications in sustainability, health, and disease control. Publications and patents reveal trends in Plant RNA specificity modification for gene silencing dsRNA applications for pest control CRISPR/Cas9 HIV-1 studies Coffee bean and banana shelf-life enhancements Honeybee-Varroa mite interactions via RNA pathways

Eugene KatsevichView profile

Assistant Professor

• Genetics
• Genomics
• High-dimensional Statistics
• +3 more

Eugene Katsevich is an Assistant Professor at the University of Pennsylvania's Wharton Department of Statistics and Data Science. His research spans statistical theory, methodology, and applications in genomics and computational biology. Education: Ph.D. in Statistics (Stanford, 2019), A.B. in Mathematics (Princeton, 2014) His work focuses on: High-dimensional variable selection and multiple testing Conditional independence testing and computational efficiency Applications to genetics and genomics Development of statistical software for biological discovery Recent publications address: Robust differential expression analysis in single-cell CRISPR screens Theoretical advances in false discovery rate control Multi-resolution causal variant localization CRISPRi-based enhancer-gene mapping Scientific awards include: Wharton Undergraduate Teaching Excellence Award (2021) He teaches courses in modern data mining (STAT4710/5710) and statistical methodology (STAT9610), and leads the Katsevich Lab at UPenn, funded by NSF and Analytics at Wharton. His research develops methods like KnockoffZoom and SCEPTRE for genome-wide analysis and single-cell CRISPR data.

Vincenzo BonniciView profile

Associate Professor

• Bioinformatics
• Artificial Intelligence
• Computational Biology
• +3 more

Vincenzo Bonnici is an Associate Professor in Informatics at the Department of Mathematical, Physical and Computer Sciences , University of Parma, Italy. His academic career includes a PhD in Computer Science from the University of Verona (2015), preceded by a master’s degree from the University of Catania (2011). He has held research positions at prestigious institutions, including the Institute for Genomics and Bioinformatics (IGB) , University of California, Irvine (2013–2014). Education BSc/MSc in Computer Science from University of Catania (2008/2011) PhD in Computer Science from University of Verona (2015) His research focuses on bioinformatics and computational biology , with a strong emphasis on subgraph matching algorithms for biomedical graphs, genomic sequence analysis using information theory, and parallel computing for biological networks. His work spans pangenomics, phylogenomics, and non-coding RNA studies, with applications in GPU and SMP architectures. The article trends reflect his core expertise in graph algorithms and computational genomics. Key contributions include MULTI-GRAPHMATCH (2025) for multigraph analysis, ARC-MATCH (2024) for edge domain-based graph querying, and foundational work on pangenome discovery (e.g., PANDELOS series, 2023). Parallel computing and information theory are recurring themes across his publications. Scientific awards include the ICPR 2014 international graph-matching contest and a best poster award at the Jacob T. Schwartz International School for Scientific Research. He has served as a speaker at 12 international conferences. Teaching includes courses on Artificial Intelligence Algorithms (2025/2026), Artificial Intelligence Laboratory , and Software Engineering at the University of Parma. His work integrates algorithmic innovation with biological data analysis.

Sven DiederichsView profile

Professor

• Functional Genomics
• Cancer Mutations
• FGFR Family Signaling
• +3 more

Prof. Dr. Sven Diederichs is a Tenured Full Professor (W3) and Division Head of the Division of Cancer Research at the Department of Thoracic Surgery , University Hospital Freiburg. He coordinates the DKTK Program 'Exploitation of Oncogenic Mechanisms' and leads the Center for Translational Cell Research (ZTZ). His work bridges high-throughput functional genomics with precision oncology. Education: PhD (Dr. rer. nat.) in Hematology/Oncology, University of Münster; Biochemistry, University of Witten/Herdecke and Eberhard-Karls-Universität Tübingen Postdoctoral Training: Harvard Medical School/Massachusetts General Hospital Cancer Center His research focuses on functional characterization of cancer-derived mutations , particularly in the FGFR family, to inform targeted therapies. He developed saturation mutational scanning libraries to map drug resistance/sensitivity across 30,000 mutations and explores non-canonical mutations like nonstop extensions and synonymous variants. Recent work highlights include comprehensive studies on RNA-dependent proteins (R-DeeP), lincNMR's role in nucleotide metabolism, and systematic analysis of mutation-driven tumorigenesis. These efforts aim to establish clinical decision support systems for precision oncology. Scientific Awards : FEBS Anniversary Prize (2016) Liver Cancer Research Award (2014) Dr. Hella Bühler Prize (2013) Binder Innovation Prize (2012)

Sheila TevesView profile

Assistant Professor

• Gene Regulation
• Transcriptional Memory
• Cell Fate Decisions
• +4 more

Sheila Teves is an Assistant Professor in the Department of Biochemistry and Molecular Biology at the University of British Columbia's Faculty of Medicine, where she holds a Canada Research Chair Tier 2 in Mechanisms of Gene Regulation. Her research program investigates fundamental mechanisms that regulate cellular memory and cell fate decisions through transcriptional regulation. Dr. Teves' primary research interests focus on three interconnected areas: transcriptional memory through the cell cycle, mechanisms of eukaryotic transcription, and equity, diversity, and inclusion in science. Her groundbreaking work has challenged long-held assumptions about mitotic bookmarking and transcription factor behavior during cell division. She employs advanced techniques including gene editing, genomics, and live-cell imaging to study how cells maintain identity through divisions and how transcription is re-established after mitosis. Her recent publications reveal novel insights into TATA-box binding protein (TBP) functions, demonstrating TBP-independent mechanisms for RNA Polymerase II transcription and TBP's role in RNA Polymerase I transcription following mitosis. These findings point to greater diversity in transcription initiation mechanisms than previously recognized, particularly in embryonic stem cells. Canada Research Chair Tier 2 in Mechanisms of Gene Regulation Dr. Teves actively mentors women and underrepresented minorities in science through social media outreach (with over 3000 Twitter followers) and serves on the EDI committee in the Biochemistry and Molecular Biology Department. She has published influential work on workplace inclusion in Science (2021) and contributed a chapter titled "The legacy of racism and sexism in the sciences" to the book "Chromatic: Ten meditations on crisis in art and letters" with fellow Wall Scholars.

Shihoko KojimaView profile

Associate Professor

• Circadian Biology
• Molecular Biology
• Genomics
• +5 more

Shihoko Kojima is an Associate Professor at the Department of Biological Sciences in the College of Science at Virginia Tech. Her research focuses on mammalian circadian biology, integrating genetics, genomics, bioinformatics, neuroscience, and molecular/cellular biology to understand how the circadian clock regulates physiological and behavioral rhythms. She has held positions at Virginia Tech since 2015, transitioning from Assistant Professor to her current rank. Ph.D. in Health Sciences from University of Tokyo (2003) M. Pharm. and B. Pharm. in Pharmaceutical Sciences from Osaka University (2000, 1998) Her research explores the molecular mechanisms underlying circadian rhythmicity, particularly how cell-autonomous oscillators drive rhythmic mRNA and protein expression. Key techniques include transcriptomics (bulk and single-cell), bioinformatics, machine learning, and mathematical modeling. She investigates RNA synthesis/degradation dynamics, non-coding RNAs, and poly(A) tail regulation in circadian control. Recent trends in her publications highlight interdisciplinary approaches: machine learning for circadian transcription prediction, rhythmic RNA dynamics in mammals and plants, and the role of antisense RNAs and poly(A) regulation. Awards include the 2013 Japanese Society for Chronobiology Young Investigator Award and a 1999 Japan Scholarship Foundation grant. 2013 Young Investigator Award, Japanese Society for Chronobiology 1999 Japan Scholarship Foundation Graduate Student Support Ben, a lab member, recently completed his dissertation on circadian RNA patterns, and Juan departed to pursue a Ph.D. in the Cortes lab. The Kojima Lab emphasizes inclusivity, welcoming researchers from diverse backgrounds to study circadian mechanisms.

Sebastian MarquardtView profile

Associate Professor

• Non-coding Genome
• RNA Processing
• Chromatin Biology
• +5 more

Dr. Sebastian Marquardt is an Associate Professor in the Department of Plant and Environmental Sciences at the University of Copenhagen , leading the Molecular Plant Biology section. His research focuses on uncovering molecular mechanisms of the non-coding genome and its role in organismal fitness. Education : PhD in Biological Sciences from the University of East Anglia (dissertation: Linking RNA Processing to Chromatin via Flowering Time Study) Research interests include: RNA polymerase II transcription in non-coding regions Short promoter-proximal RNAs (sppRNAs) and their correlation with gene expression Chromatin-based signaling during transcriptional interference Co-transcriptional RNA processing and modification Recent publications address topics like non-coding RNA isoforms in food security, co-transcriptional miRNA processing, and histone chaperone mechanisms in Arabidopsis. His work emphasizes transcriptional dynamics over RNA product functionality. Scientific awards include: EMBO Young Investigator Program (2020) Hallas-Møller Investigator Award (2015) European Research Council Starting Grant (2017) Novo Nordisk Ascending Investigator (2021) Marquardt supervised BSc thesis student Julie Overgaard Hansen and hosted researcher Lucia Gonzalo (2023). His laboratory developed innovative methods for detecting non-coding transcription units missed by conventional approaches.

• Cancer Research
• Molecular Biology
• Non-coding RNA
• +2 more

Delia D'Avola is a Clinical Professor in the Department of Internal Medicine at the University of Navarra's School of Medicine, with active clinical and research roles at the Clínica Universidad de Navarra (CUN) and its Cancer Center (CCUN). School of Medicine (Facultad de Medicina) Department of Internal Medicine Clínica Universidad de Navarra (CUN) Cancer Center Clínica Universidad de Navarra (CCUN) Educational background: Doctorate in Medicine, University of Navarra (2011). Thesis: Treatment of hepatocellular carcinoma: analysis of the BCLC algorithm and results of treatment with radioembolization, supervised by Dr. Bruno Sangro Gómez Acebo and Dr. Mercedes Iñarrairaegui Bastarrica. Research Interests: Dr. D'Avola specializes in cancer biology with emphasis on therapeutic non-coding RNA, microproteins, and integrated stress response mechanisms. She leads the research group NONCOD ARN No Codificante Terapéutico, Microproteínas y Estrés Integrado en Cáncer, developing novel oncology treatments targeting RNA pathways and cellular stress modulation in tumor environments. Scientific Awards: No scientific awards were documented in the provided text. Advising and Grants: The source material contains no details regarding student supervision, grant funding, or collaborative projects. Laboratories and Teams: She directs the NONCOD research group within the CCUN, focusing on translational cancer therapeutics through non-coding RNA and microprotein analysis under integrated stress conditions.

Puri FortesView profile

Researcher

• RNA Biology
• Cancer Biology
• Therapeutic Microproteins
• +3 more

Puri Fortes is a Researcher affiliated with the University of Navarra, specifically within the School of Medicine and the Department of Internal Medicine. She is associated with the Cancer Center Clínica Universidad de Navarra (CCUN) and the Cima Universidad de Navarra research institute. Her work focuses on non-coding RNA, therapeutic microproteins, and integrated stress response mechanisms in cancer. Her research group, NONCOD ARN No Codificante Terapéutico, Microproteínas y Estrés Integrado en Cáncer , explores the role of non-coding RNA and microproteins in cancer biology, with an emphasis on stress response pathways. She can be contacted via email at pfortes@unav.es.

• Cancer Research
• RNA Biology
• Gene Therapy
• +3 more

Eric Rovira Barreira is a Research Fellow at the University of Navarra, working within the Cancer Center Clínica Universidad de Navarra (CCUN) and affiliated with Cima Universidad de Navarra. His research focuses on therapeutic non-coding RNA, microproteins, and integrated stress response mechanisms in oncology. He earned his PhD in 2022 from the University of Navarra with the thesis "Developing RNA sequences to regulate therapeutic genes expression" under the supervision of Dr. Fernando Pastor Rodríguez and Dr. Purificación Fortes. His primary research interests include: Cancer Research RNA Biology Gene Therapy Non-coding RNA Microproteins Stress Response in Cancer Dr. Rovira Barreira is an active member of the "NONCOD ARN No Codificante Terapéutico, Microproteínas y Estrés Integrado en Cáncer" research group, advancing RNA-based therapeutic strategies for cancer treatment through molecular engineering approaches.

Amelia Martí del MoralView profile

Professor

• Nutrition
• Obesity
• Telomere Maintenance
• +4 more

Amelia Martí del Moral (born in Granada, Spain) is a Spanish pharmacist, researcher, and Professor of Physiology at the University of Navarra . She serves as co-principal investigator of the CIBER group on the Pathophysiology of Obesity and Nutrition at the Carlos III Health Institute and director of the Navarre Study Group on Childhood Obesity (GENOI). PhD in Physiology (University of Navarra, 1992) with extraordinary award Postdoctoral training at Baylor College of Medicine, Harvard Medical School, University of Marburg, and Tufts University Her research focuses on telomere length , nutritional interventions , and obesity-related metabolic disorders , with an emphasis on lifestyle modifications , epigenetics , and nutrigenomics . Her publications analyze connections between Mediterranean diet , DNA methylation , and cardiometabolic risk in both pediatric and elderly populations. Recent publications highlight trends in telomere dynamics linked to physical activity , sleep quality , and diet composition , particularly within the PREDIMED-Plus and EVASYON studies. She has pioneered research on epigenetic biomarkers in obesity. Scientific Awards Premio Be Alsajara a la Excelencia (2017) Premio a la mejor tesis en obesidad (2016) Premio Estrategia NAOS (2009) Medalla de Plata, Sociedad Británica de Nutrición (2007) Premio Merck & Daphne (2007) She has held leadership roles including vice-dean of the Faculty of Pharmacy and Nutrition and membership in the Scientific Committee of the Institute of Food Sciences (University of Navarra). Her work bridges academic research , public health policy , and clinical practice .

• Microbiology
• Antibiotic Discovery
• Bacterial Biochemistry
• +2 more

David Han is a Lecturer at the University of Waterloo, specializing in microbiology and antibiotic discovery. His research focuses on bacterial resistance mechanisms, peptidoglycan biochemistry, and novel antimicrobial agents. He utilizes structural biology, enzymology, and natural product screening to address urgent challenges in infectious diseases. Research Focus: Dr. Han's work centers on: Mechanisms of antibiotic resistance in pathogens like Staphylococcus aureus and Pseudomonas aeruginosa Enzymatic pathways of bacterial cell wall modification Discovery and optimization of natural product-derived inhibitors Structural analysis of virulence factors and resistance enzymes Publications: His recent articles (2020-2025) demonstrate consistent focus on: Metallo-β-lactamase inhibition strategies Peptidoglycan biosynthesis and recycling pathways Antifungal agent discovery against Candida auris Structural characterization of bacterial enzymes Innovative approaches to overcome antimicrobial resistance No information is available regarding awards, student advising, research grants, or laboratory affiliations.