Find Academic Supervisors

• Anaerobic Microbiology
• Environmental Metagenomics
• Microbial Physiology & Metabolism
• +3 more

Marie Schölmerich is an Assistant Professor of Environmental Microbiology at ETH Zurich's Department of Environmental Sciences , affiliated with the Institute of Biogeochemistry and Pollutant Dynamics. Her research focuses on anaerobic microorganisms and their roles in greenhouse gas cycling, particularly the Wood-Ljungdahl pathway in anoxic ecosystems. She employs metagenomics, fieldwork, and biochemical methods to study microbial physiology and biogeochemical processes. Education: B.Sc. Biochemistry (Leipzig University, 2011), M.Sc. Molecular Biosciences (Frankfurt University, 2013), Ph.D. Biology (Frankfurt University, 2018). Postdoctoral training included positions at Hamburg University (2018–2020) and UC Berkeley (2021–2023). Research Interests: Anaerobic microbiology, environmental metagenomics, microbial physiology, and protein biochemistry. Her lab investigates methane and CO₂ conversion mechanisms in anaerobic archaea, leveraging extrachromosomal elements and genomic diversity. Awards: SNSF Starting Grant (2025) Walter Benjamin Fellowship (DFG, 2020) Postdoc Plus Stipend (Claussen-Simon Foundation, 2019) Advising & Grants: Leads the Schölmerich Lab at ETH Zurich, mentoring students and securing grants like the SNSF Starting Grant. Her work bridges environmental microbiology with applied biotechnology. Labs/Teams: Schölmerich Lab, ETH Zurich. Focus areas include anaerobic metabolism, microbial symbiosis, and biogeochemical modeling.

Michael TempletonView profile

Professor

• Environmental Engineering
• Infectious Diseases
• Public Health Engineering
• +6 more

Professor Michael Templeton is a leading academic in Public Health Engineering at Imperial College London , affiliated with the Faculty of Engineering and the Department of Civil and Environmental Engineering . He also holds the Royal Academy of Engineering Research Chair in Global Sanitation Technology , working closely with organizations like Oxfam , Water For People , and the International Worm-Based Sanitation Association . His work addresses critical issues in water supply , sanitation , and public health , particularly in regions affected by schistosomiasis and water scarcity . Professor Templeton earned a Bachelor's degree with honours in Engineering Science and a PhD in Civil-Environmental Engineering , both from the University of Toronto . He is a chartered civil engineer , Fellow of the Institution of Civil Engineers , and elected Fellow of the African Academy of Sciences . His professional experience includes advisory roles for the World Health Organization , Ethiopian Federal Ministry of Health , and various research councils. Environmental Engineering : Water treatment Infectious Diseases : Schistosomiasis control Global Health : Sanitation in low-income settings Climate Resilience : Cold region sanitation Waste Valorization : Biochar from faecal sludge Diagnostic Innovation : Biosensors for pathogens His most recent research explores stormwater odorants , UV disinfection , and smartphone-based water quality monitoring . He has also advanced tiger worm toilets and citizen science approaches in data-scarce regions. His work spans 15 countries including Ghana , Sierra Leone , India , and Ethiopia . Scientific awards and honors include: Fellow of the Institution of Civil Engineers Elected Fellow of the African Academy of Sciences Royal Academy of Engineering Research Chair Professor Templeton has no listed students in the provided data but has contributed extensively to sanitation innovation , waterborne disease prevention , and capacity-building in developing nations. He has led field projects and published on vermifiltration systems , biochar production , and disinfection byproducts .

Yan-Yeung LukView profile

Associate Professor

• Bioorganic Chemistry
• Chemical Biology
• Microbial Signaling
• +4 more

Yan-Yeung Luk is an Associate Professor in the Department of Chemistry at Syracuse University. His research focuses on organic synthesis of bioactive molecules to control microbial lifestyles, bacterial signaling pathways, and developing label-free bioassays for ligand-receptor interactions. He holds a Ph.D. in Bioorganic Chemistry from the University of Chicago (2001). Education: Ph.D., Bioorganic Chemistry, University of Chicago (2001) M.A., Chemistry, University of Chicago (1996) B.A., Chemistry, Polytechnic University (1994) Research interests include: - Synthesis of small molecules to combat drug tolerance and resistance in bacteria - Engineering bacterial motility-enabled binding (BMED) assays for selective ligand detection - Understanding bacterial surface signaling and its role in virulence and biofilm formation Recent publications focus on ligand-based modulation of bacterial behavior, antibiotic mechanisms affecting biofilms, and novel antivirulence strategies. His work has implications for combating multidrug-resistant pathogens. Grants include leadership in NSF-funded undergraduate research programs and NIH grants exploring bacterial natural product genes. He serves on Syracuse University's Financial Conflict of Interest Committee and reviews for the NIH/NIAID. Teaching responsibilities include medicinal chemistry, organic spectroscopy, and research methodologies at both undergraduate and graduate levels.

Anne K. DunnView profile

Associate Professor

• Microbiology
• Molecular and Cellular Biology
• Anaerobic Microbiology
• +3 more

Anne K. Dunn is an Associate Professor of Microbiology at The University of Oklahoma. Her research focuses on bacterial physiology and symbiotic interactions, particularly using Vibrio fischeri and Photobacterium leiognathi as model organisms. She earned her B.S. in Biology from Iowa State University (1996), a Ph.D. in Bacteriology from the University of Wisconsin (2002), and completed postdoctoral training at the University of Georgia (2002-2007). Her lab investigates microbial energy conservation pathways, with a focus on the alternative oxidase (AOX) and its role in bacterial stress response and symbiosis. Key research themes include understanding AOX’s functional benefits in marine bacteria and the regulation of bioluminescence in Photobacterium leiognathi . The Dunn Lab integrates physiology, genetics, biochemistry, and bioinformatics to explore how microbial physiology influences survival and ecosystem roles. Her advising includes graduate students like Aaron Russell and Tyer Shadid, and undergraduate researchers. The lab collaborates on projects involving bacterial metabolism, symbiotic interactions, and environmental adaptation. Current work extends to SAR11, SAR86, and Roseobacter group bacteria, leveraging genomic and transcriptomic data for broader ecological insights.

Hemant NaikareView profile

Professor

• Infectious Diseases
• Bacteriology
• Disease Ecology
• +6 more

Hemant Naikare is a tenured Professor and Director of the Tifton Veterinary Diagnostic and Investigational Laboratory (TVDIL) at the University of Georgia’s College of Veterinary Medicine. He specializes in diagnostic microbiology, with a focus on infectious diseases of livestock, companion animals, and zoonotic pathogens. His lab, part of the Georgia Veterinary Diagnostic Laboratories, operates with a $3.5M annual budget and 40 staff members, providing full-service diagnostic capabilities across animal species. Dr. Naikare’s research emphasizes novel diagnostic platforms for rapid microbial detection, antimicrobial resistance surveillance, and disease ecology. Key projects include USDA-funded initiatives to enhance diagnostics for African Swine Fever (ASF), Classical Swine Fever (CSF), and avian influenza. He has held roles such as Section Head of Bacteriology at Texas A&M’s Veterinary Medical Diagnostic Laboratory and serves on editorial boards (e.g., Journal of Veterinary Diagnostic Investigation) and NIH grant review panels. His work spans global collaborations in Central America, Southeast Asia, and Africa, focusing on strengthening diagnostic infrastructure. He also prioritizes training the next generation of veterinary and public health professionals through experiential learning programs.

Andrew W. ParkView profile

Professor

• Infectious Diseases
• Disease Ecology
• Disease Modeling
• +3 more

Andrew W. Park is a Professor with a joint appointment at the Odum School of Ecology and the Department of Infectious Diseases in the College of Veterinary Medicine at the University of Georgia. His research focuses on host-parasite interactions across scales, integrating ecological and epidemiological approaches to understand disease emergence, spillover, and transmission dynamics. Key areas include zoonotic diseases, vector-borne pathogens, and the impacts of environmental and anthropogenic changes on disease systems. Park leads the Park Lab, which employs mathematical modeling and empirical studies to address global health challenges. His work emphasizes the interface between wildlife, domestic animals, and human health, with recent studies exploring post-pandemic immunity dynamics, invasive species parasite ecology, and Ebola virus spillover triggers. Park collaborates internationally on disease modeling and has contributed to frameworks for anticipating infectious disease re-emergence using early warning signals. His findings inform public health policy and conservation strategies. Publications highlight interdisciplinary approaches, including studies on white pox coral disease, hemorrhagic disease in deer populations, and the role of environmental refugia in parasite evolution. Despite extensive contributions, no specific scientific awards are noted in the provided texts.

• Molecular Microbiology
• Genomics Surveillance
• Antimicrobial Resistance
• +5 more

Jessica Agius is a Postdoctoral Research Fellow at the Centre for Infectious Diseases and Microbiology - Public Health and the Sydney Infectious Diseases Institute , University of Sydney. Her work integrates molecular epidemiology and genomics surveillance to tackle infectious disease threats. Education : BAnVetBioSc (Hons I, 2016), PhD (2021) from University of Sydney Research Interests include: Molecular Microbiology Genomics Surveillance Antimicrobial Resistance One Health Publications highlight her focus on SARS-CoV-2 genomic variability, Enterococcus pathogenesis in reptiles, and adenovirus diversity in wildlife. Her work bridges in vitro and clinical cohort studies. Scientific Awards : Best Poster & Presentation (2018, Marie Bashir Institute) Academic Achievement Award (2016, Australian Society for Parasitology) Grants include Holsworth Wildlife Research Endowment and National Environmental Science Program funding. She supervises honours students on topics spanning reptile health and antimicrobial resistance.

• Antifungal Agents
• Fungal Pathogenicity
• Drug Discovery
• +3 more

Michael Bromley is a Lecturer in Drug Discovery at the Manchester Fungal Infection Group (MFIG) within the University of Manchester . He holds the title of Prof Chair in the Division of Evolution, Infection and Genomics . His research focuses on the mechanistic basis of fungal pathogenicity with a translational emphasis on developing novel antifungal agents. He led efforts at F2G Ltd, a University of Manchester spin-out, to identify drug targets in Aspergillus fumigatus and advance these to clinical trials. Bromley coordinates the €6.1M FP7 program NOFUN , driving antifungal drug development from discovery to trials. Research Interests: Bromley’s work centers on fungal pathogenicity mechanisms , antifungal drug discovery , and genetic elements in A. fumigatus . His team developed methods like high-throughput gene replacement and chemical genetic screens to study fungal genetics and drug action. He investigates resistance mechanisms to agricultural fungicides and their impact on clinical antifungals like olorofim. Grants & Projects: As Principal Investigator (PI), he leads the Manchester Fungal Infection Group (MFIG) , a project studying A. fumigatus in infections like chronic pulmonary aspergillosis. His NOFUN initiative aims to translate novel compounds into clinical use. He founded Syngenics Limited , a biotech spin-out, and contributes to policy via editorial roles like Policy@Manchester . Impact: His work addresses global health challenges tied to fungal infections, including antifungal resistance and diagnostics. Media coverage highlights his research on agricultural fungicides driving drug resistance and fungal threats in climate change. Bromley’s contributions align with UN Sustainable Development Goals like good health and environmental sustainability.

Colleen T. O’LoughlinView profile

Assistant Professor

• Microbiology
• Host-Microbe Interactions
• Bacterial Small Molecules
• +5 more

Colleen T. O’Loughlin is an Assistant Professor of Chemistry and Biochemistry at Bates College. She earned a B.S. in Biochemistry with a minor in Art from Ithaca College, a Ph.D. in Molecular Biology from Princeton University, and completed postdoctoral research in Bioengineering at the University of California, San Francisco and Stanford University. Her research focuses on understanding how skin bacteria synthesize molecules that influence human health, with applications in developing probiotics for skin diseases like acne and eczema. Techniques employed include biochemistry, microbiology, analytical chemistry, and small-molecule screening. Her work emphasizes host-microbe interactions, particularly bacterial communication systems (quorum sensing), and the development of inhibitors to combat pathogenic bacteria. Notable contributions include studies on gut microbiota recovery post-antibiotics and chemoreception mechanisms in C. elegans. Her courses span foundational chemistry and advanced topics in biochemistry and natural products. Publications highlight interdisciplinary approaches to microbial ecology and therapeutic development. While no awards are explicitly listed, her research has addressed critical areas in microbiology and drug discovery. Advising and grant activities are not detailed here, but her lab continues to explore engineering microbes for human health applications.

Donald C. Hall, Jr.View profile

Assistant Professor

• Antibiofilm Therapeutics
• Non-Thermal Plasma (NTP) Antimicrobial Strategies
• Bacterial Multi-Drug Tolerance
• +4 more

Donald C. Hall, Jr., PhD, is an Assistant Professor in the Department of Microbiology & Immunology at Drexel University College of Medicine. His research focuses on combatting persistent bacterial infections through innovative therapeutics, diagnostics, and materials. He directs the Drexel Medicine Diagnostics Laboratory, overseeing molecular diagnostic testing and regulatory compliance for infectious diseases. Education: PhD in Chemical Biology/Medicinal Chemistry (Drexel University, 2020), Postdoctoral Fellowship in Microbiology (Drexel University College of Medicine, 2022), BS in Biochemistry (York College of Pennsylvania, 2014). Research Interests: Computational drug design, bacterial multi-drug tolerance, stringent response mechanisms, non-thermal plasma (NTP) antimicrobial strategies, and rapid molecular diagnostics. His lab develops anti-biofilm agents, inhibitors targeting bacterial persister cells, and advanced diagnostic tools for sepsis. Key Research Trends: Recent work emphasizes NTP optimization for clinical use, novel antimicrobial materials, and rapid pathogen detection systems. His articles span biofilm disruption, SARS-CoV-2 drug modeling, and Alzheimer’s microbiome studies. Grants & Collaboration: Lab members include Michiko Thwe (PhD Candidate) and Lauren Walsh (MS Candidate). Collaborations include Dr. Garth Ehrlich on RelA inhibitors and Dr. Vandana Miller on molecular diagnostics. He holds patents on biofilm-disrupting compounds and anti-biofilm drug pipelines. Labs/Teams: The Hall Lab at Drexel integrates chemistry, microbiology, and biotechnology to advance therapies for chronic infections. The Drexel Medicine Diagnostics Lab provides CLIA/CAP-accredited clinical diagnostic services.

Aaron D DotsonView profile

Professor

• Environmental Engineering
• Water Treatment
• Environmental Chemistry
• +5 more

Aaron D Dotson is a Professor and Vice Chancellor for Research at the University of Alaska Anchorage, holding appointments in the School of Engineering's Civil Engineering Department. He also serves as Affiliate Professor at the University of Alaska Fairbanks and directs the Environmental Engineering Laboratory. His academic journey includes a PhD in Civil & Environmental Engineering from Arizona State University (2008), an MSE from the same institution (2005), and a B.S. in Civil Engineering from the University of Arizona (2003). Dr. Dotson's research focuses on water treatment processes, disinfection by-product formation, and Arctic infrastructure challenges. He leads investigations into dissolved organic matter characterization, advanced oxidation technologies, and sustainable water systems for remote communities. His work integrates environmental engineering with policy, addressing food-energy-water nexus issues and climate adaptation in cold regions. Professional Roles: Chair of Civil Engineering Graduate Committee, member of University Research Council, and advisor to Anchorage Water Utility. Committees: Technical Council for Cold Regions Engineering, AWWA Organic Contaminant Research Committee. His recent research explores household water reuse systems, FEW nexus applications in microgrids, and pathogen mitigation in unpiped communities. Over 50 peer-reviewed articles and book chapters reflect his contributions to environmental engineering science.

Sabesan YoganathanView profile

Associate Professor

• Medicinal Chemistry
• Drug Discovery
• Natural Products
• +5 more

Sabesan Yoganathan is an Associate Professor in the Department of Pharmaceutical Sciences at St. John's University, part of the College of Pharmacy and Health Sciences. He joined the faculty in 2014 after completing a postdoctoral fellowship at Yale University under Professor Scott Miller. His research focuses on developing chemical and biological approaches to discover novel medicinal natural products and their analogs, targeting infectious diseases and cancer. Dr. Yoganathan holds a PhD in Chemistry from the University of Alberta and a BS in Chemistry (Biological Specialization) from McMaster University. His educational background includes undergraduate training at McMaster University as an NSERC research fellow, followed by doctoral research under Professor John Vederas at the University of Alberta. His postdoctoral work at Yale advanced peptide-based catalysis for site-selective modification of natural products like daptomycin and vancomycin, enabling the creation of drug analogs. Research Interests: The Yoganathan lab integrates chemistry and biology to design new drug candidates, including studies on multidrug resistance mechanisms, peptide-based catalysis, and natural product synthesis. Key areas include benzimidazole derivatives for cancer therapy, nanoparticle-based antimicrobials, and overcoming ABC transporter-mediated resistance in cancer cells. Teaching Contributions: He teaches advanced medicinal chemistry courses (e.g., PHS 3508, PHR 5106) to Pharm.D. students and mentors graduate/undergraduate researchers. His team explores topics like synthetic methodologies for drug analogs and drug delivery systems. Labs & Teams: The interdisciplinary Yoganathan Lab emphasizes translational research, with recent successes in preclinical drug development, nanomedicine, and drug repurposing strategies. The lab collaborates on projects such as novel BMP receptor agonists and inflammation-modulating agents for preterm birth prevention.

Herb SchellhornView profile

Professor

• Bacterial Genetics
• Molecular Microbiology
• Bacterial Stress Response
• +5 more

Herb Schellhorn is a Professor in the Department of Biology within the Faculty of Science at McMaster University. His research spans fundamental bacterial genetics to applied environmental microbiology, with a particular focus on bacterial adaptation mechanisms and water quality monitoring. Dr. Schellhorn earned his B.Sc. and M.Sc. in Microbiology from the University of Guelph, followed by a Ph.D. in Microbiology from North Carolina State University. His academic background established the foundation for his expertise in bacterial stress response mechanisms and molecular microbiology. His laboratory primarily investigates bacterial genes that help cells adapt to sub-optimal growth conditions, with significant emphasis on the RpoS regulon. Early in his career, he focused on fundamental mechanisms of bacterial gene regulation, oxidative stress response, and DNA repair in Escherichia coli. More recently, his research has expanded to address critical environmental challenges, particularly in recreational water safety and pathogen detection in the Great Lakes region. His work combines DNA microarrays, real-time PCR, reporter fusions, and mass spectrometry with advanced genomic techniques to develop innovative solutions for water quality assessment. Analysis of his recent publications reveals a strategic evolution from pure bacterial physiology toward applied environmental microbiology. While maintaining his core interest in bacterial adaptation mechanisms, approximately 70% of his recent work (2023-2025) focuses on water quality monitoring, microbial source tracking, and recreational water safety. His research demonstrates exceptional methodological diversity, incorporating molecular diagnostics, metagenomics, and computational approaches to address public health challenges. Development of novel molecular methods for rapid water quality assessment Application of genomic technologies to environmental monitoring Investigation of bacterial adaptation in natural aquatic environments Creation of same-day testing protocols for recreational water safety Characterization of microbial communities in freshwater ecosystems Dr. Schellhorn actively contributes to teaching at McMaster University, instructing courses including Medical Microbiology (MOLBIOL 6P03 and 4P03), Introductory Biology (BIOLOGY 1P03), and Techniques in Molecular Genetics (MOLBIOL 3V03). His teaching reflects his research expertise, bridging theoretical knowledge with practical laboratory skills in molecular biology and microbiology. His laboratory serves as a training ground for students interested in both fundamental bacterial physiology and applied environmental microbiology.

Alexandra WeisbergView profile

Assistant Professor

• Plant-Microbe Interactions
• Microbial Genomics
• Pathogen Evolution
• +3 more

Alexandra Weisberg is Assistant Professor in the Department of Botany and Plant Pathology at Oregon State University's College of Agricultural Sciences. Her Cordley Hall laboratory focuses on evolutionary mechanisms in plant-microbe interactions using genomic and computational approaches. Research examines mobile genetic elements' role in pathogen evolution across agricultural systems, with emphasis on Agrobacterium, Streptomyces, and Phytophthora species. Current projects integrate genomics, molecular biology, and field epidemiology to track disease emergence and microbial adaptation. The Weisberg Lab employs bioinformatic pipelines (e.g., Beav annotation tool) for comparative genomics and develops genomic epidemiology methods for plant pathogens. Lab members include postdoctoral researchers Alex Zaccaron and Arafat Rahman, along with graduate students studying fungal and bacterial evolution.

Stephen RamseyView profile

Associate Professor

• Computational Systems Biology
• Bioinformatics
• Precision Medicine
• +6 more

Stephen Ramsey, an Associate Professor at Oregon State University, holds dual appointments in the School of Electrical Engineering and Computer Science (College of Engineering) and the Department of Biomedical Sciences (Carlson College of Veterinary Medicine). With a PhD in Physics from the University of Maryland, his postdoctoral training in computational genomics at the University of Washington, and professional experience at the Institute for Systems Biology and Center for Infectious Disease Research, Ramsey bridges computational methods with biomedical applications. Education : Ph.D., Physics, University of Maryland; M.S., Physics, University of Maryland; Sc.B., Mathematical Physics, Brown University Ramsey specializes in computational systems biology , focusing on bioinformatics , biomedical knowledge graphs , and precision medicine . His research integrates machine learning , gene regulatory network modeling , and multi-omics data analysis to address challenges in rare disease diagnostics , drug monitoring , and inflammatory disease mechanisms . Current work includes AI-driven biomedical translation and electrochemical biosensor development for non-invasive diagnostics . Recent publications highlight knowledge graph applications in translational biomedicine , causal network inference in clinical-environmental data integration , and cross-species cancer transcriptomics . His team develops tools like RTX-KG2 and PloverDB to standardize biomedical data sharing and semantic reasoning . Scientific Awards : 2019 Zoetis Award (Carlson College of Veterinary Medicine) 2016 NSF CAREER Award 2016 PhRMA New Investigator Award 2010 NIH K25 Mentored Quantitative Research Award Ramsey advises in computational biology courses (CS 446/546) and contributes to biomedical AI through projects like mediKanren for rare disease diagnostics . His NSF-funded research explores gene expression noise and regulatory network dynamics , while NIH and PhRMA grants support his translational medicine initiatives. He leads the Ramsey Laboratory , which develops graph-based reasoning tools for biomedical data translation and multi-omics integration . The lab's work spans comparative oncology models, electrochemical biosensors , and knowledge graph infrastructure for clinical decision support .