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Gail E. KaiserView profile

Professor

• Software Engineering
• Static and Dynamic Program Analysis
• Software Testing
• +7 more

Gail E. Kaiser is a Professor of Computer Science and the Director of the Programming Systems Laboratory (PSL) in the Computer Science Department at Columbia University. She has been with Columbia University since 1985, becoming a full Professor in 1998. Prof. Kaiser's research spans software engineering, program analysis, software testing, and software security, with recent focus on addressing challenges in AI/ML systems testing and security. Prof. Kaiser received her PhD in Computer Science from Carnegie Mellon University in 1985 and her ScB in Computer Science and Engineering from MIT in 1979. Her dissertation at CMU was titled "Semantics for Structure Editing Environments" under advisor Nico Habermann, and at MIT she completed "Automatic Extension of an Augmented Transition Network Grammar for Morse Code Conversations" under advisor Al Vezza. Prof. Kaiser's research interests primarily focus on software engineering following a systems building approach, with recent emphasis on static and dynamic program analysis techniques to improve software reliability and security. Since 2005, she has investigated testing "non-testable" programs, particularly in machine learning, data mining, and scientific computing applications where traditional testing oracles are insufficient. She has developed novel techniques and tools for detecting bugs and verifying repairs in complex systems. Concurrently, she has worked on collaboration environments for computational scientists, creating knowledge sharing and domain-aware environments to support scientific workflows. Prof. Kaiser's recent publications demonstrate a strong focus on the intersection of software engineering and artificial intelligence. Her work addresses critical challenges in testing AI systems, code understanding through deep learning, vulnerability detection, and educational tools for computational thinking. There's a clear evolution from traditional software engineering topics toward AI/ML applications, with particular emphasis on metamorphic testing for non-testable systems, code similarity analysis, and educational applications. Prof. Kaiser has received numerous prestigious awards throughout her career: Distinguished Journal Award (10 Years) from 18th IEEE International Conference on Software Testing, Verification and Validation (ICST), April 2025 Best Research Paper Award at 24th IEEE International Conference on Source Code Analysis & Manipulation (SCAM), October 2024 Distinguished Reviewer Awards for ASE 2024 and FSE 2024 ACM SIGSOFT Distinguished Paper Award for "CONCORD: Clone-aware Contrastive Learning for Source Code", July 2023 Best Student Paper Award at ICCE 2021 Multiple ACM SIGSOFT Distinguished Paper Awards dating back to 2014 Presidential Young Investigator in Software Engineering and Software Systems from NSF (1988-1993) Prof. Kaiser has chaired Columbia's doctoral program since 1997 and served on editorial boards including IEEE Internet Computing and as a founding associate editor of ACM Transactions on Software Engineering and Methodology. Her lab has been continuously funded by major agencies including NSF, NIH, DARPA, ONR, NASA, and numerous companies. Current grants include significant NSF funding for secure containers architecture, learning semantics of code for software assurance, and finding semantic security bugs. As Director of the Programming Systems Laboratory (PSL), Prof. Kaiser leads research in software systems, program analysis, and software testing. The lab has developed numerous tools and techniques for software reliability and security, with recent focus on challenges in AI/ML systems. Her work bridges theoretical foundations with practical applications, often resulting in deployable tools that address real-world software engineering challenges.

Alexandre Bouchard-CôtéView profile

Professor

• Computational Statistics
• Bayesian Inference
• Monte Carlo Methods
• +4 more

Alexandre Bouchard-Côté is a Professor of Statistics at the University of British Columbia (UBC), affiliated with the Department of Statistics within the Faculty of Science. His research focuses on computational statistics, Bayesian methods, and Monte Carlo techniques, with applications in evolutionary biology, cancer genomics, and computational linguistics. Education : PhD in Computer Science (with Designated Emphasis in Statistics) from UC Berkeley (2010), BSc in Mathematics and Computer Science from McGill University (2005). Affiliations : Director of the Blang probabilistic programming project and leader of the Bouncy Particle Sampler research group. Research Interests : Bouchard-Côté develops scalable Bayesian computational methods, including non-reversible Monte Carlo algorithms like the Bouncy Particle Sampler, and applies these to problems in cancer phylogenetics, evolutionary dynamics, and historical linguistics. His work emphasizes bridging theoretical foundations with practical tools for data science. Publications Trends : Recent work spans distributed sampling frameworks (e.g., Pigeons.jl), variational phylogenetic inference, and cancer clonal evolution modeling. His articles often address algorithmic scalability and interdisciplinary applications in biology and astronomy. Awards : CRM-SSC Prize in Statistics (2024) PIMS-UBC Mathematical Sciences Young Faculty Award (2018) Tweedie New Researcher Award (2016) Advising & Grants : Supervises graduate students (e.g., Son Luu, Nikola Surjanovic) and leads funded projects on distributed MCMC and cancer genomics. Collaborates with institutions like the Simons Foundation and the Canadian Statistical Sciences Institute (CANSSI). Labs/Teams : Core member of the UBC Statistical Machine Learning group, contributing to open-source tools like Blang and the Bouncy Particle Sampler implementation.

Laura EloView profile

Professor

• Computational Biomedicine
• Medical Bioinformatics
• Data Science
• +7 more

Laura Elo serves as Professor of Computational Medicine and Head of the Medical Bioinformatics Centre at the University of Turku, Finland. She concurrently holds the position of Research Director at Turku Bioscience Centre and acts as InFLAMES Flagship Contact, driving interdisciplinary biomedical research initiatives. Her academic foundation includes a PhD in Applied Mathematics (2007) and Adjunct Professorship in Biomathematics (2011), establishing her quantitative expertise before transitioning into biomedical applications. Her research program focuses on transforming molecular and clinical datasets through statistical modeling and advanced machine learning . Key thrusts include robust computational tools for proteome/epigenome analysis, AI-driven digital health diagnostics, and computational systems immunology for immune-mediated diseases. This work directly addresses challenges in reproducibility and scalability of high-throughput biotechnology data. Analysis of her recent publications reveals dominant themes in type 1 diabetes biomarker discovery , multi-omics integration , and immune system modeling , with strong emphasis on clinical translation through collaborations with experimental and medical teams. Her scientific recognition includes: JDRF Career Development Award Professor Elo actively trains MSc/PhD students and postdoctoral fellows while leading major research initiatives including ERC grants. Her teaching portfolio spans Bioinformatics Journal Club, AI in Diagnostics, and Systems Biology courses. The Elo Lab (https://elolab.utu.fi) operates as a hub for computational biomedicine, developing open-source tools like CellRomeR while maintaining close ties with Turku Bioscience Centre's experimental facilities for validating computational predictions in immunology and metabolic disease contexts.

• Quantum-safe cryptography
• Lattice-Based Cryptography
• Post-Quantum Cryptography
• +4 more

Ron Steinfeld is an Associate Professor in the Department of Software Systems & Cybersecurity at Monash University, Australia. He holds editorial roles in Designs Codes and Cryptography (since 2017) and has served on technical committees for top-tier conferences like ASIACRYPT, CRYPTO, and EUROCRYPT. His research focuses on quantum-safe cryptography, lattice-based cryptography, and blockchain security, with over 80 refereed publications and AUD$4M+ in research funding. Education: BSc Mathematics and Physics (Monash University, 1998) BE (Hons., First Class) Electrical and Computer Systems (Monash University, 2000) PhD Computer Science (Monash University, 2003) Research Interests: Design and analysis of cryptographic algorithms, quantum-safe protocols, lattice-based security foundations, and blockchain applications. His work underpins NIST standard algorithms like Kyber and Dilithium through structured lattice problem research. Recent Articles Trends: Focus on privacy-preserving blockchain protocols, post-quantum signature schemes, encrypted data search, and cryptographic applications in adversarial AI. Recent work includes fair Bitcoin watchtower schemes and genomic database privacy solutions. Awards: ASIACRYPT 2015 Best Paper Award Advising & Grants: Supervises PhD projects on quantum-safe cryptography and blockchain security. Leads initiatives like the AUD$4M ARC-funded Quantum Information Technology project. Collaborates with industry partners including CSIRO/Data61. Labs/Teams: Key contributor to Monash’s cybersecurity and cryptography research groups, involving interdisciplinary projects on materials discovery ( Æinstein initiative) and post-quantum blockchain security.

• Statistical Machine Learning
• Bayesian Experimental Design
• Probabilistic Programming
• +3 more

Tom Rainforth is an Associate Professor of Statistical Machine Learning at the University of Oxford's Department of Statistics, leading the RainML Research Lab (rainml.uk). He holds a Tutorial Fellowship at Mansfield College and is Principal Investigator of the ERC Starting Grant 'Data-Driven Algorithms for Data Acquisition' (2024–2029). Previously, he held roles including a postdoc under Yee Whye Teh (2017–2019), Junior Research Fellow at Christ Church College (2019–2019), and Florence Nightingale Bicentennial Fellow (2020–2024). He earned his MEng in Mechanical Engineering from the University of Cambridge and his D.Phil from Oxford under Frank Wood and Michael Osborne, focusing on probabilistic programming and Monte Carlo methods. He briefly worked in Ferrari's Formula 1 team. Research Interests : Bayesian experimental design, probabilistic and data-efficient machine learning, active learning, deep learning (with a focus on probabilistic approaches), probabilistic programming, and Monte Carlo methods. His work emphasizes statistical efficiency and adaptive algorithms. Publications : Recent contributions span modern Bayesian experimental design, adaptive importance sampling (Daisee), and applications of probabilistic methods in LLMs and generative models. His research bridges theory and practice, addressing challenges in scalability and robustness. Awards : ERC Starting Grant (2024–2029), highlighting his leadership in foundational AI research. Advising & Grants : Supervises 15 graduate students, including work on Bayesian neural networks, generative flows, and experimental design. His ERC grant supports cutting-edge data-driven algorithm development. Labs & Teams : Directs the RainML Lab, which develops scalable Bayesian methods and probabilistic AI systems.

• Evolutionary Biology
• Marine Biology
• Taxonomy
• +5 more

Mikael Thollesson is a Senior Lecturer at Uppsala University, affiliated with the Department of Organismal Biology; Systematic Biology and Klubban’s Biological Station. His research focuses on evolutionary biology, phylogenetics, taxonomy, and molecular biology, particularly in marine and freshwater sponges (Porifera), bacterial pathogens, and computational methods in evolutionary analysis. Evolutionary Biology Marine Biology Taxonomy His recent publications highlight trends in sponge biodiversity, phylogeography, bacterial horizontal gene transfer, and mitochondrial gene evolution. Key articles include studies on Swedish demosponge faunas, Silene sect. Arenosae systematics, and computational tools like SPRIT for detecting gene transfers. No explicit awards or grants are mentioned.

Wengong JinView profile

Assistant Professor

• AI for drug discovery
• Generative AI models
• Geometric deep learning
• +5 more

Wengong Jin is an Assistant Professor at the Khoury College of Computer Sciences, Northeastern University, and a visiting research scientist at the Eric and Wendy Schmidt Center at the Broad Institute. He holds a PhD from MIT CSAIL, advised by Prof. Regina Barzilay and Prof. Tommi Jaakkola. Research Interests: His work focuses on geometric and generative AI models for drug discovery, biology, and chemical engineering. Key areas include equivariant neural networks (e.g., FAFormer), diffusion models for binding energy prediction, antibody/enzyme design (RefineGNN, SurfPro), and molecular design through graph neural networks (Junction Tree VAE). He also explores domain generalization and systems for autonomous molecular discovery. Publications: His research has been published in top venues like NeurIPS, ICLR, ICML, Nature, Science, and Cell. Recent breakthroughs include discovering novel antibiotics using explainable AI and designing synergistic drug combinations for cancer treatment. Awards: He has received the BroadIgnite Award, Dimitris N. Chorafas Prize, and MIT EECS Outstanding Thesis Award for his contributions to computational biology and AI-driven drug discovery. Teaching: Currently teaches a PhD seminar on AI for Science, focusing on integrating machine learning into scientific discovery processes.

Mihai PopView profile

Professor

• Bioinformatics
• Genomics
• Computational Biology
• +3 more

Dr. Mihai Pop is a Professor of Computer Science and Director of the University of Maryland Institute for Advanced Computer Studies (UMIACS). He holds appointments in the Department of Computer Science, UMIACS, and the Center for Bioinformatics and Computational Biology (CBCB). His research focuses on computational biology, metagenomics, and algorithm development for genomic data analysis. He received a Ph.D. in Computer Science from Johns Hopkins University (2000), followed by work at The Institute for Genomic Research (TIGR) developing genome assembly algorithms. Education: Ph.D., Computer Science, Johns Hopkins University, 2000. Research Interests: Bioinformatics, genomics, metagenomics, computational geometry, software testing. His lab develops tools for analyzing microbial communities and has pioneered methods for metagenomic assembly and analysis. Notable tools include the AMOS genome assembly toolkit. Recent Article Trends: Recent work emphasizes long-read sequencing, metagenomic profiling (e.g., TIPP3), and strain-level analysis (e.g., Strainy). He addresses challenges in scaling sequence-based searches and improving taxonomic resolution in large datasets. Awards: ACM Fellow (2019), ISCB Fellow (2022), UMD Excellence in Teaching Award (2015). Grants & Leadership: Co-leader of the Human Microbiome Project data analysis group. Active in diversity initiatives to promote inclusivity in computational fields. Labs/Teams: Pop Lab (pop-lab.org) focuses on computational methods for microbial genomics and metagenomics.

• Biomedical Data Privacy
• Genomics
• Machine Learning
• +3 more

Hyunghoon Cho is an Assistant Professor at Yale School of Medicine in the Department of Biomedical Informatics & Data Science, with a secondary appointment in the Department of Computer Science. He received his PhD in Electrical Engineering and Computer Science from MIT (2019) and MS/BS in Computer Science from Stanford University (2013). His research focuses on computational challenges in biomedical data privacy, single-cell genomics, and network biology. Assistant Professor (Primary): Biomedical Informatics & Data Science Assistant Professor (Secondary): Computer Science Appointments: Yale School of Medicine | Broad Institute (Schmidt Fellow) Research Themes: Privacy-Enhancing Technologies for genomic and health data Scalable AI/ML tools for omics data analysis Structured biological modeling for system-level discovery His work includes secure GWAS, transcriptomic privacy assessment, and sfkit - a federated genomic analysis toolkit. He received the NIH Director's Early Independence Award and leads NSF-funded projects on confidential genome analytics. Awards: NIH Director's Early Independence Award Lab Members: Haris Smajlović (Postdoc), Vincent Angelo (CBB MS), Denis Loginov (Senior Software Engineer), Lucy Zheng (CBB PhD)

Rina DechterView profile

Professor

• Artificial Intelligence
• Machine Learning
• Probabilistic Reasoning
• +5 more

Rina Dechter is a Professor of Computer Science at the University of California, Irvine (UCI), affiliated with the Donald Bren School of Information and Computer Sciences (ICS). She specializes in automated reasoning, probabilistic and constraint-based graphical models, and causal inference. Dechter has held leadership roles, including Co-Editor-in-Chief of Artificial Intelligence since 2011 and editorial board memberships in journals such as the Constraint Journal and Journal of Machine Learning Research . Education : Ph.D., Computer Science, University of California, Los Angeles (UCLA) M.S., Applied Mathematics, Weizmann Institute B.S., Mathematics and Statistics, Hebrew University of Jerusalem Research Interests : Dechter’s work focuses on computational aspects of automated reasoning, constraint processing, probabilistic reasoning, and causal inference. She develops efficient algorithms for graphical models, emphasizing tractable reasoning tasks and anytime search strategies. Her recent projects include causal decision-making frameworks funded by a $5M NSF grant. Awards : Presidential Young Investigator Award (1991) AAAI Fellow (1994) ACP Research Excellence Award (2007) ACM Fellow (2013) Elected to the American Academy of Arts & Sciences (2025) Grants & Collaborations : She leads a multi-institutional NSF-funded project on causal foundations of AI decision-making. Her work emphasizes trustworthiness in AI through causal models, with applications in robotics and public health.

John PaisleyView profile

Associate Professor

• Machine Learning
• Bayesian Statistics
• Data Science
• +3 more

John Paisley is an Associate Professor of Electrical Engineering at Columbia University's Fu Foundation School of Engineering and Applied Science, and a member of Columbia's Data Science Institute (DSI). He holds a B.S., M.S., and Ph.D. in Electrical and Computer Engineering from Duke University (2004-2010), followed by postdoctoral research in Computer Science at Princeton University and UC Berkeley. His research focuses on Bayesian models, posterior inference techniques for Big Data, and applications in data analysis, recommendation systems, information retrieval, and compressed sensing. He has pioneered methods like Bayesian Gaussian Process ODEs and Double Normalizing Flows, with recent work emphasizing uncertainty quantification in environmental modeling and neuroimaging analysis. His collaborative workflows (e.g., bneR ) address air pollution exposure and PM2.5 concentration uncertainties, combining Bayesian nonparametric ensembles with geospatial data. He has also developed frameworks for neural network interpretability, image denoising, and compressed sensing MRI. Paisley's work bridges statistical theory and applied machine learning, with applications in healthcare, environmental science, and geophysics. His academic contributions include over 50 publications since 2016, spanning topics like deep metric learning, adversarial learning, and variational inference optimization. He maintains an active research group and serves on editorial boards for machine learning and signal processing journals.

Daniel SegrèView profile

Professor

• Systems Biology
• Metabolic Engineering
• Microbial Ecology
• +7 more

Professor Daniel Segrè is a faculty member at Boston University, holding the title of Professor of Biology, Bioinformatics, and Biomedical Engineering. His research focuses on systems biology, microbial ecology, and metabolic engineering, with an emphasis on understanding complex biological networks and their applications in bioenergy and biomedicine. Segrè leads the Segre Lab ( segrelab.bu.edu ), where theoretical and computational approaches are applied to study metabolism, microbial interactions, and synthetic biology. Segrè earned his PhD from the Weizmann Institute of Science, Israel. His work bridges fundamental science and applied engineering, addressing topics such as microbial community dynamics, metabolic pathway design, and environmental microbiome applications. Research Interests: Systems biology of metabolism, evolution of biochemical networks, microbial interactions, bioinformatics, and environmental microbiome engineering. His lab develops computational models (e.g., COMETS) to simulate microbial ecosystems and design synthetic microbial communities for climate change mitigation and bioenergy production. Teaching: Courses include BE 777 (Computational Genomics), BF 821 (Bioinformatics Seminar), and BF 571 (Dynamics and Evolution of Biological Networks). These courses reflect his expertise in integrating computational methods with biological systems analysis.

Katja HoseView profile

Professor

• Knowledge Graphs
• Semantic Web
• Data Management
• +7 more

Katja Hose is a Full Professor of Data Management at TU Wien's DBAI research unit, heading the Data Management and Knowledge-Driven AI Lab. She previously held a Poul Due Jensen Foundation Professorship at Aalborg University. Her research focuses on data and knowledge engineering, including graph databases, knowledge graphs, querying, analytics, and machine learning, with interdisciplinary applications in bioscience, healthcare, and environmental assessment. Education: PhD in Computer Science (Ilmenau University of Technology, 2009), Postdoc at Max Planck Institute for Informatics (2009–2012). Academic roles include Program Co-Chair for ISWC 2024 and EDBT 2023, and editorial board membership at VLDBJ and TGDK. She leads projects like TARGET (health virtual twins) and ARMADA (data management). Research Interests: Knowledge Graphs, Semantic Web, Big Data, Machine Learning, Data Integration, and Provenance Systems. Key contributions include SHACL shape extraction, conversational data analytics, and environmental knowledge graphs. Awards include the 2025 Distinguished Meta-Reviewer Award and 2024 Manfred Paul Award. Advising and Grants: Supervised students including E. Pürmayr (Diploma Thesis 2025). Active in EU projects (TARGET, ARMADA) and grant coordination. Labs/Teams: DMKI Lab at TU Wien, collaborating with interdisciplinary teams in healthcare and environmental science.

Britt AdamsonView profile

Associate Professor

• Stress Response Networks
• DNA Damage Response
• Genome Editing
• +3 more

Britt Adamson is an Associate Professor in the Department of Molecular Biology and the Lewis-Sigler Institute for Integrative Genomics at Princeton University, where she serves as Director of the Undergraduate Program in Quantitative and Computational Biology. Her lab investigates molecular networks in human cells with focus on stress response mechanisms and genome editing technologies. She received her B.S. in Biology from the Massachusetts Institute of Technology (2005) and Ph.D. in Genetics and Genomics from Harvard University (2012), followed by postdoctoral training at UCSF under Jonathan Weissman supported by a Damon Runyon Cancer Research Foundation Fellowship. Adamson's research centers on how cells organize stress response networks during DNA damage and endoplasmic reticulum stress, developing CRISPR-based functional genomics and single-cell sequencing tools to map molecular behaviors. Her work bridges fundamental cell biology with therapeutic applications in genome editing. Analysis of her 15 most recent publications reveals dominant themes in precision genome editing (prime/base editing optimization) and systematic dissection of DNA repair pathways through combinatorial CRISPR screening. Her lab consistently integrates computational approaches with high-resolution experimental techniques to uncover context-dependent cellular behaviors. Her scientific recognitions include: Damon Runyon Cancer Research Foundation Postdoctoral Fellowship Princeton IP Accelerator Award (2025) STAT Who to Know: 10 Scientists leading a new generation of gene editors (2024) Adamson actively mentors eight graduate students (including alumni Ann Cirincione and Jun Hussmann) and two postdocs, with research funded through institutional awards and collaborative grants. Her lab's technological developments have enabled projects spanning virology, immunology, and developmental biology. The Adamson Lab operates within Princeton's Lewis-Sigler Institute for Integrative Genomics, fostering an interdisciplinary environment that merges cell biology, genomics, and computational science. Current projects focus on improving prime editing efficiency and understanding stress response adaptation in disease contexts.

Emma PiersonView profile

Assistant Professor

• Artificial Intelligence
• Healthcare
• Health Equity
• +3 more

Emma Pierson is an Assistant Professor of Computer Science at the University of California, Berkeley, affiliated with the Berkeley Artificial Intelligence Research Lab (BAIR) , Computational Precision Health , and the Center for Human-Compatible AI . She focuses on developing data science and machine learning methods to address issues in healthcare equity and social inequality . Her work includes studies on race adjustments in clinical algorithms, migration patterns, and leveraging LLMs for health equity. Education: Ph.D. in Computer Science from Stanford University (2020), Master’s in Statistics from the University of Oxford. Prior roles include Assistant Professor at Cornell Tech, Senior Researcher at Microsoft Research, and data scientist at 23andMe and Coursera. Research Interests: Her research spans fair clinical prediction , sparse autoencoders , health disparities , and algorithmic fairness . Notable projects include the MIGRATE dataset for granular migration analysis and studies on policing disparities. Awards: NSF CAREER Award, Rhodes Scholarship, Hertz Fellowship, MIT Technology Review 35 Innovators Under 35, and Samsung AI Researcher of the Year. She writes a statistics blog ( Obsession with Regression ) and contributes to media outlets like The New York Times and FiveThirtyEight . Labs/Teams: Leads the MIGRATE project, a collaboration to analyze fine-grained migration data. Engages in interdisciplinary work across AI, healthcare, and social science.