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Adam RunionsView profile

Researcher

• Computational Modeling
• Developmental Biology
• Computer Science
• +4 more

Adam Runions is a researcher in the Department of Computer Science at the University of Calgary, leading the MPG Partner Group in computational analysis of leaf development through collaborative work with Miltos Tsiantis. His group is embedded in the Graphics Cluster, focusing on interdisciplinary problems at the intersection of computer science and developmental biology. University of Calgary - Department of Computer Science MPG Partner Group (2022) Graphics Cluster affiliation His research explores computational modeling and analysis of plant form and development across multiple scales, integrating geometric modeling, physically-based simulation, and computer-aided design. Key themes include plant morphogenesis, self-organization of natural forms, and cross-disciplinary applications in computer graphics and animation. Recent publications emphasize plant development (leaf shape, bark patterning), mathematical modeling (auxin-driven patterning), and geometric techniques (subdivision surfaces, PUPs). Collaborations span institutions like the Max Planck Institute for Plant Breeding Research. Scientific Awards Marie Sklodowska-Curie Fellowship Best Paper Award (International Conference on Cyberworlds 2015) Best Student Paper Award (Computer Graphics International 2011) The group actively recruits BSc, MSc, and PhD students with backgrounds in computer science and mathematics for projects on plant form simulation and digital content creation. Research integrates evolutionary biology, biomechanical modeling, and computational techniques.

Matthew O'TooleView profile

Associate Professor

• Computer Graphics
• Robotics
• Computer Vision
• +5 more

Matthew O'Toole is an Associate Professor at Carnegie Mellon University's School of Computer Science, holding joint appointments in the Robotics Institute and Computer Science Department. His research focuses on computational imaging, integrating optics, electronics, and computational processing to innovate visual information capture and display. Education: PhD (Computer Science, University of Toronto, 2016), MSc (2009), BSc (Honors Computer Science and Mathematics, University of British Columbia, 2007). Prior roles include Banting Postdoctoral Fellow at Stanford University and visiting scholar at MIT Media Lab's Camera Culture group. Research interests emphasize programmable imaging systems, transient imaging, non-line-of-sight sensing, and holographic displays. Key innovations include vibration sensing via dual-shutter optics and radar super-resolution for autonomous vehicles. Awards include runner-up best paper recognitions at ICCV 2007, CVPR 2014, and SIGGRAPH 2017 dissertation honors. Advisees include Dorian Chan and Arjun Teh. Grants supported by Canadian Banting Fellowships. Active in workshop organization (CVPR Computational Cameras 2016-2017) and course development on computational imaging at SIGGRAPH 2014. Labs/Teams: Leads research in computational imaging and robotics at CMU, collaborating with industry partners like NVIDIA and MDA. Current projects explore LiDAR-radar fusion, holographic projection systems, and dynamic scene reconstruction.

Jindong TanView profile

Professor

• Medical Robotics
• Surgical Robotics
• Human-Robot Interactions
• +3 more

Jindong Tan is a Professor in the Department of Mechanical, Aerospace, and Biomedical Engineering at the University of Tennessee, Knoxville (since 2015). Previously, he held roles at Michigan Technological University (2002–2015) and Northeastern University, China (1995–1998). He specializes in medical/surgical robotics, human-robot interactions, wearable sensors, control systems, and mechatronics. His research integrates robotics, biomedical engineering, and computer science to advance minimally invasive surgical tools, wearable technology, and autonomous systems. Education: Ph.D. in Mechanical Engineering from Michigan State University (2002), M.S. from Northeastern University (1995), and B.S. from Lanzhou University of Technology (1992). Research interests focus on developing innovative medical robotic systems, including laparoscopic camera robots, magnetic actuation mechanisms, and human-robot collaboration frameworks. He has contributed to advancements in wearable sensors for healthcare, sensor networks for dynamic environments, and calibration techniques for bio-inspired robots. Key projects include the design of an untethered laparoscopic camera robot (s-CAM), magnetic localization for surgical tools, and frameworks for controlled robot language in human-robot collaboration. His work emphasizes practical applications in surgical environments and wearable health monitoring. Professional service includes roles with the IEEE Robotics & Automation Society, Engineering in Medicine and Biology Society, and the Association for Computing Machinery. Contact: tan@utk.edu, Perkins Hall 315.

Jeannette BohgView profile

Assistant Professor

• Robotics
• Machine Learning
• Computer Vision
• +3 more

Jeannette Bohg is an Assistant Professor of Computer Science at Stanford University, directing the Interactive Perception and Robot Learning Lab. Previously, she was a group leader at the Autonomous Motion Department (AMD) of the MPI for Intelligent Systems (2012-2017). She holds a PhD from KTH Royal Institute of Technology (Stockholm) and degrees from Chalmers University and TU Dresden. Her research focuses on perception, learning, and real-time multi-modal methods for autonomous robotic manipulation and grasping, aiming to bridge principles of human sensorimotor coordination with robotic implementation. Education: PhD in Robotics (KTH), MSc in Art & Technology (Chalmers), Diploma in Computer Science (TU Dresden) Research interests include developing goal-directed, real-time robotic systems capable of meaningful feedback for execution and learning. Key areas are dexterous manipulation, imitation learning, and cross-embodiment policy transfer. Notable contributions include the TidyBot platform and work on force-aware surgical robotics. Awards include the 2019 IEEE ICRA Best Paper Award, 2019 IEEE RA Early Career Award, and 2020 RSS Early Career Award. Her lab explores intersections of robotics, ML, and computer vision. Advising: Actively mentoring students/postdocs in manipulation, perception, and learning. Grants and collaborations span NSF, Stanford AI Lab, and industry partnerships. Future work emphasizes robust real-world deployment and human-robot collaboration. Labs/Teams: Leads the Interactive Perception and Robot Learning Lab, contributing to Stanford’s AI ecosystem. Previously managed the MPI AMD group, fostering interdisciplinary research in autonomous systems.

• Microbiology
• Infectious Diseases
• Cell Biology
• +7 more

Manuel R. Amieva is a Professor at Stanford University School of Medicine , holding joint appointments in Pediatrics - Infectious Diseases and Microbiology & Immunology . He is also a member of the Maternal & Child Health Research Institute (MCHRI) . His clinical practice at Stanford Medicine Children's Health focuses on pediatric infectious diseases. Education: Medical Education: Stanford University School of Medicine (1997) Fellowship: Stanford University Pediatric Infectious Disease Fellowship (2004) Internship & Residency: Stanford Health Care at Lucile Packard Children's Hospital (1998-1999) Dr. Amieva's research investigates host-pathogen interactions at epithelial barriers, with specific expertise in Helicobacter pylori , Listeria monocytogenes , Salmonella enterica , and Staphylococcus aureus . His lab develops innovative organoid culture systems with controlled polarity to study microbial colonization and oncogenic mechanisms. Key discoveries include: H. pylori's manipulation of epithelial junctions via the CagA protein Listeria's exploitation of cell extrusion sites for invasion Staphylococcus toxin interactions with adherens junctions Gastric stem cell activation by pathogens Recent publication trends show continued leadership in infectious disease mechanisms (2020-2025), with a focus on: Pathogen-specific epithelial breach strategies Organoid modeling of viral/bacterial interactions Redox-dependent host factor regulation Single-cell spatial transcriptomic analyses Multi-institutional educational frameworks His scientific collaborations span disciplines including: Gastric cancer genomics initiatives COVID-19 lung infection models Stem cell-microbe interactions Medical education reform projects Dr. Amieva maintains active clinical research while mentoring students in both the Microbiology & Immunology and Pediatrics programs. His lab at Stanford employs advanced 3D confocal microscopy and organ-on-a-chip technologies to visualize epithelial colonization dynamics.

Knut DrescherView profile

Associate Professor

• Bacterial Biofilms
• Microbial Multicellularity
• Biophysics
• +5 more

Prof. Knut Drescher is an Associate Professor at the Biozentrum, University of Basel , leading a research group focused on bacterial biofilms , swarming , and microbial multicellularity . Previously, he served as a Professor of Biophysics and Max Planck Research Group Leader at Philipps-Universität Marburg (2015-2021) and conducted postdoctoral research at Princeton University. Research Interests: Physical and biological mechanisms of biofilm formation Cell-cell interactions in microbial communities Antibiotic resistance in biofilms Hydrodynamics of bacterial swarms Evolution of cooperation in multispecies biofilms Development of bioimaging software (BiofilmQ, BacStalk) Scientific Awards: 2023: SNSF Consolidator Grant 2019: Heinz Maier-Leibnitz Prize (DFG), VAAM Research Prize, IUPAP Young Scientist Prize 2016: ERC Starting Grant Advising & Grants: Advises PhD and Master's students in microbiology, biophysics, and bioinformatics Secured major grants from ERC , HFSP , and DFG

Jeremy DahlView profile

Professor

• Medical Ultrasound Imaging
• Ultrasonic Beamforming
• Image Reconstruction
• +7 more

Jeremy Dahl is a Professor of Radiology (Pediatric Radiology) at Stanford University School of Medicine. He directs the Ultrasound Imaging & Instrumentation Lab and serves as Director of Research Academic Affairs in the Department of Radiology since 2020. He holds multiple affiliations across Stanford including Bio-X, the Cardiovascular Institute, Wu Tsai Human Performance Alliance, Maternal & Child Health Research Institute, Stanford Cancer Institute, and Wu Tsai Neurosciences Institute. Dr. Dahl received his B.S. in Electrical Engineering from the University of Cincinnati (1999) and Ph.D. in Biomedical Engineering from Duke University (2004). His research focuses on developing ultrasonic beamforming and image reconstruction methods for diagnostic imaging applications, particularly techniques that generate high-quality images in difficult-to-image patients. His laboratory specializes in B-mode and Doppler imaging techniques that utilize additional information from ultrasonic wavefields to improve image quality and develop real-time imaging systems for clinical applications including cardiac, liver, and fetal imaging. Dr. Dahl's research has led to significant advancements in ultrasound molecular imaging platforms, sound speed estimation, aberration correction, and reverberation noise suppression. His work often bridges engineering innovation with clinical applications for cancer detection and other diseases. His recent publications demonstrate strong focus on machine learning applications in ultrasound, distributed aberration correction, and molecular imaging techniques. Fellow, American Institute of Ultrasound in Medicine (2021) Senior Member, Institute of Electrical and Electronics Engineers (2020) Distinguished Investigator Award, The Academy for Radiology & Biomedical Imaging Research (2018) Outstanding Paper Award, IEEE Ultrasonics, Ferroelectrics, and Frequency Control Society (2011) Dr. Dahl serves in editorial roles for major journals including IEEE Transactions on Medical Imaging (2017-2024) and IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control (2013-Present). His laboratory has successfully translated numerous innovations into clinical applications, with multiple patents including recent developments in pulsed focused ultrasound therapy and speed of sound quantification.

Kevin C. ZhouView profile

Assistant Professor

• Computational Imaging
• Biomedical Engineering
• Optical Systems
• +3 more

Kevin C. Zhou is an Assistant Professor in the Department of Biomedical Engineering at the University of Michigan. His research focuses on developing high-performance computational optical imaging systems with unprecedented spatiotemporal throughput, integrating advanced optical instrumentation with machine learning-driven algorithms to analyze big data in biology and medicine. His lab specializes in creating imaging systems capable of capturing high-resolution, high-speed, and high-dimensional datasets. Dr. Zhou holds a Ph.D. in Biomedical Engineering from Duke University (NSF GRFP Fellow) and a B.S. in Biomedical Engineering from Yale University (Barry Goldwater Scholar). Prior to joining U-M, he was a Schmidt Science Fellow and postdoctoral researcher at UC Berkeley. Key research areas include: High-throughput microscopy (gigapixel-scale systems) 3D tomographic imaging Light field and Fourier-based imaging modalities Machine learning for image reconstruction and analysis Biomedical applications in cellular/molecular imaging His recent work has advanced technologies like multi-camera array microscopes (MCAM/MCAS) and Fourier light field mesoscopes, achieving video-rate 3D imaging of freely moving organisms. These innovations enable applications in digital cytopathology, behavioral tracking, and high-content biological studies. Notable awards include the NSF Graduate Research Fellowship and Barry Goldwater Scholarship. His research has been featured in top journals and conferences with a focus on advancing optical imaging hardware and computational pipelines.

Levent Burak KaraView profile

Professor

• Machine Learning
• Artificial Intelligence
• Computational Design
• +12 more

Levent Burak Kara is a Professor in the Department of Mechanical Engineering at Carnegie Mellon University (CMU), with a courtesy appointment in the Robotics Institute. He is a leading researcher in AI-driven computational design, additive manufacturing, and intelligent engineering systems, leading the Visual Design and Engineering Lab (VDEL) at CMU. Education: B.S., Mechanical Engineering, Middle East Technical University (1998) M.S., Mechanical Engineering, Carnegie Mellon University (2000) Ph.D., Mechanical Engineering, Carnegie Mellon University (2005) His research focuses on integrating machine learning, optimization, and geometric modeling to revolutionize engineering design and manufacturing. Key areas include topology optimization, CAD intelligence, digital twins, generative design, bioengineering, and electronic design automation. His work enables automation of traditionally labor-intensive design processes using deep learning and reinforcement learning. His recent publications reveal a strong trend toward physics-informed surrogate modeling, real-time simulation, manufacturability prediction, and AI-driven automation in mechanical, biomedical, and electronic systems. These works frequently appear in top journals such as Journal of Mechanical Design and Journal of Applied Mechanics , and at premier conferences like NeurIPS and DAC. Scientific Awards: National Science Foundation CAREER Award ASME Design Automation Society Young Investigator Award Google AI for Social Good Impact Scholar Kara advises several Ph.D. students and has secured significant funding from federal agencies such as the NSF and the U.S. Army Research Laboratory, as well as collaborations with industrial leaders including Cadence Design Systems and NVIDIA. His research is also supported by CMU’s NextManufacturing Center and the Critical Technology Initiative. He is actively involved in developing intelligent design systems that leverage AI to automate product design, optimize manufacturing processes, and improve medical diagnostics, particularly in oral cancer screening and organ preservation. His lab, VDEL, is a hub for innovation in AI-enabled engineering.

Omer BayraktarView profile

Researcher

• Neural Diversity
• Spatial Transcriptomics
• Glia Biology
• +3 more

Omer Bayraktar is a Group Leader at the Wellcome Sanger Institute , leading research in the Cellular Genomics Programme. His work focuses on decoding human brain cellular diversity using spatial transcriptomics , imaging , and functional screening to study neural complexity in health and disease. Bayraktar's educational background includes a PhD from HHMI under Chris Doe, investigating neural diversity development in Drosophila , followed by postdoctoral work at University of California, San Francisco and University of Cambridge as a Life Sciences Research Foundation Fellow. He developed a spatial transcriptomic pipeline during his postdoc to analyze astrocyte heterogeneity in the cerebral cortex. His research explores neural cell type mapping , glial-neuronal interactions , and cellular pathways in neurodevelopmental disorders . Recent publications emphasize 3D tissue mapping , multi-omic integration , and computational tools like Cell2fate and WebAtlas. His work bridges neurogenetics and computational biology to advance understanding of human tissue ecosystems. Bayraktar's lab collaborates with the Human Cell Atlas initiative and develops technologies such as automated histology pipelines and highly-multiplexed smFISH for molecular cell typing. His team also investigates glia-based therapies and astrocyte functional heterogeneity in neurodevelopmental contexts. Key scientific contributions include: Discovering astrocyte layer patterns independent of neuronal laminae Developing cell2location for spatial cell mapping Characterizing Drosophila neural stem cell models with human relevance Notable awards include the Life Sciences Research Foundation Fellowship during his postdoctoral training. His current group includes a PhD student , Senior Data Scientists , and Bioinformaticians .

• Statistical Machine Learning
• Deep Learning
• Computational Biology
• +2 more

Rui Li is an Associate Professor in the Ph.D. program at Rochester Institute of Technology's Golisano College of Computing and Information Sciences. She directs the Lab for Use-inspired Computational Intelligence (LUCI), focusing on AI applications in computational biology and medical imaging. Education includes: B.Sc. in Computer Science, Harbin Institute of Technology M.Sc. in Computer Science, Tianjin University of Technology Ph.D. in Computing and Information Sciences, RIT Research integrates statistical machine learning with computational biology, medical image analysis, and human visual attention modeling. Current projects include deep learning for histopathology, multimodal medical image registration, and gene network inference. Publications demonstrate consistent focus on medical AI applications, with recent advances in unsupervised image registration, interactive segmentation, and multimodal fusion techniques. Key trends include self-supervised learning, uncertainty-aware models, and human-AI collaboration frameworks. Awards include the NSF CAREER Award for developing adaptive machine intelligence systems. Advises multiple PhD students on projects spanning deep learning architectures, biomedical image analysis, and biological network modeling. Leads several NSF-funded projects including human-centered image understanding systems and gene-protein network inference tools. Directs LUCI lab investigating machine learning for healthcare applications and teaches graduate courses in Statistical Machine Learning and Deep Learning.

Septimiu E. SalcudeanView profile

Professor

• Medical Robotics
• Medical Imaging
• Biomedical Engineering
• +4 more

Septimiu E. Salcudean is a Professor at the University of British Columbia's Department of Electrical and Computer Engineering, holding the C.A. Laszlo Chair in Biomedical Engineering and a Canada Research Chair. His research focuses on medical robotics, image guidance systems, and ultrasound elastography. He has contributed to advancements in haptic interfaces, teleoperation, and needle insertion modeling. Education: B.Eng and M.Eng from McGill University (1979-1981), Ph.D. from UC Berkeley (1986). He has held positions at IBM T.J. Watson Research Center and was a Killam Research Fellow at ONERA in France. His work spans robotics, biomedical engineering, and surgical systems. Research interests include medical robotics, real-time imaging, and surgical navigation. Notable projects involve ultrasound-guided surgery, vibro-elastography for tissue characterization, and haptic feedback systems. His lab, the Robotics and Control Laboratory (RCL), develops technologies like the da Vinci surgical system integration with ultrasound imaging. Awards include the NSERC Synergy Award, IEEE Fellowship, and UBC Killam Research Prize. He has advised over 30 graduate students and published extensively in robotics and biomedical journals.

Leonardo ChamorroView profile

Professor

• Aero/Hydrodynamics
• Wind and Hydrokinetic Energy
• Advanced Flow Diagnostics
• +5 more

Leonardo Chamorro is a Professor in the Department of Mechanical Science and Engineering at the University of Illinois at Urbana-Champaign (UIUC), with affiliations in Earth Science and Environmental Change, Aerospace Engineering, and Civil and Environmental Engineering. His research focuses on fluid dynamics, renewable energy systems, and turbulence modeling. He holds a Ph.D. in Civil Engineering from the University of Minnesota (2010) and has held academic positions at UIUC since 2013, advancing to Full Professor in 2024. Chamorro's work spans experimental and theoretical investigations of wind and hydrokinetic energy, geophysical flows, and particle dynamics. His research group, the Renewable Energy & Turbulent Environment Group (RE-TE-G), explores topics like tidal flow multifractality, vortex dynamics, and bio-inspired robotics. Key achievements include Nature and Lab on a Chip cover articles, and contributions to turbulence modeling for tidal energy systems. He has received awards such as the Best Paper Award in Energies (2018) and recognition for pandemic-related research (2021). His editorial roles include associate editorships at journals like Journal of Renewable and Sustainable Energy and Frontiers in Energy Research . Chamorro has supervised numerous graduate students and postdocs, contributing to over 150 peer-reviewed publications since 2009.

Konstantinos KalogeropoulosView profile

Assistant Professor

• Proteomics
• Snake Venom Research
• Protein Structure Prediction
• +3 more

Konstantinos Kalogeropoulos is an Assistant Professor at the Department of Biotechnology and Biomedicine, Technical University of Denmark (DTU), leading research at the Cell Diversity Lab. His work bridges proteomics, computational biology, and snake venom research. Current projects: "The Proteomic Landscape during Influenza Infection" (2022-2025) Supervisor for PhD projects on protease network rewiring in psoriasis and wound exudate degradomics Research interests include: Proteomic analysis of inflammatory diseases Snake venom toxin structure prediction Extracellular matrix biomechanics De novo peptide sequencing algorithms Computational modeling of protease networks Recent article trends demonstrate his work in • Database-free proteomics (InstaNovo/InstaNexus) • Snake venom pathophysiology (V-ToCs clustering) • Inflammatory disease biomarkers (psoriasis, impaired healing) • Extracellular matrix mechanics (fibronectin tension, gut inflammation) Advising: Supervises PhD students Polhaus, C. J. M. and Haack, A. M., focusing on protease networks and wound healing.

Benjamin BusamView profile

Researcher

• 3D Computer Vision
• Multi-Modal Sensor Fusion
• Collaborative Robotics
• +6 more

Dr. Benjamin Busam is a Senior Research Scientist at the Technical University of Munich , affiliated with the Chair for Computer Science Applications in Medicine under Prof. Nassir Navab. Starting September 2025, he will hold the Professorship for Photogrammetry and Remote Sensing at TUM. His career includes leadership roles at FRAMOS Imaging Systems and Huawei Research in London. Education: Mathematics (TUM), Mathematics and Physics (ParisTech, University of Melbourne), PhD in Mathematics (TUM, 2014) His research focuses on 3D computer vision , multi-modal sensor fusion , and their applications in collaborative robotics and augmented reality . He specializes in projective geometry , 6D pose estimation , and neural radiance fields , with a particular emphasis on photometrically challenging environments. Recent publications highlight advancements in 3D scene understanding , neural rendering , and medical imaging , often leveraging machine learning and vision-language models . His work has been recognized through awards like the EMVA Young Professional Award (2015) and Innovation Pioneer of the Year (2019) , along with multiple Outstanding Reviewer distinctions at leading conferences. Dr. Busam has supervised numerous PhD and MSc students on topics including 6D pose estimation , medical augmented reality , and robotic ultrasound , collaborating with institutions like MIT , École Polytechnique , and University of Padova .