Rezaul Chowdhury

Rezaul Chowdhury is an Associate Professor in the Department of Computer Science at Stony Brook University (SBU), with a joint appointment at the Institute for Advanced Computational Sciences (IACS). His research focuses on algorithms and data structures for efficient serial and parallel computing, computational biology, and experimental algorithmics. He leads the Theoretical and Experimental Algorithmics (TEA) Group, emphasizing both algorithm design and engineering. Notable contributions include the Pochoir stencil compiler and the AutoGen system for dynamic programming algorithms.

Chowdhury earned his Ph.D. from UT Austin, working on cache-efficient algorithms, and held postdoctoral positions at MIT and UT Austin. He has received prestigious awards, including the NSF CAREER Award and a Best Paper Award at IPDPS 2010. His work spans parallel programming, cache-oblivious algorithms, and bioinformatics applications like protein-protein docking (F2Dock).

Teaching includes advanced courses on algorithms, parallel computing, and supercomputing. He advises multiple Ph.D. and master’s students and actively contributes to competitive programming through the SBU teams. His research projects are NSF-funded, focusing on stencil computations and resource-oblivious algorithms.

Key software contributions include Pochoir (for stencil computations), F2Dock (protein docking), and AutoGen (automated algorithm discovery). His work bridges theory and practice, addressing challenges in multicore and distributed systems.