Markus Axer

Prof. Markus Axer is a Professor and Deputy Head of the Structural and Functional Organisation of the Brain (INM-1) at the Institute of Neuroscience and Medicine (INM) within Forschungszentrum Jülich. His research focuses on connectomics, neuroimaging technologies (e.g., 3D-Polarized Light Imaging), and high-performance computing applications in brain architecture analysis. He leads the 'Fiber Architecture' working group, advancing microscopy techniques like scattered light imaging and MRI-histology correlation for studying brain microstructure.

His work bridges experimental neuroscience with computational methods, aiming to decode brain organization at meso- and macroscales. Key achievements include developing the HippoMaps atlas of the human hippocampus and improving fiber orientation mapping in brain tissue. Awards include Fellowship in the Royal Netherlands Academy of Arts and Sciences (2024).

Research emphasizes cross-modal data integration, with applications in Alzheimer’s disease biomarker validation and primate brain evolution studies. He collaborates with academic institutions like the University of Wuppertal and contributes to international initiatives like the BigBrain Analytics Learning Laboratory.